Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 0.0e+00 1545.4 805 100.0
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 0.0e+00 1354.3 806 88.3
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 0.0e+00 1347.4 807 87.9
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 0.0e+00 1345.9 807 88.0
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 0.0e+00 1318.9 806 86.0
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 0.0e+00 1292.7 806 85.7
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 0.0e+00 1269.6 804 84.2
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 0.0e+00 1259.2 806 83.3
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 0.0e+00 1234.9 793 83.7
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 0.0e+00 1234.6 791 83.1
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 0.0e+00 1223.4 809 82.1
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 0.0e+00 1219.9 818 79.2
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 0.0e+00 1087.0 814 72.4
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 2.4e-249 865.9 795 59.1
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 1.7e-242 843.2 813 56.2
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 4.9e-242 841.6 807 58.0
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 4.9e-242 841.6 813 56.1
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 6.3e-242 841.3 821 56.8
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 2.4e-241 839.3 812 55.9
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 3.1e-241 839.0 805 56.9
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 3.3e-238 828.9 822 54.7
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 3.3e-238 828.9 815 55.3
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 9.5e-238 827.4 818 54.6
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 9.5e-238 827.4 822 55.0
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 4.7e-237 825.1 823 55.4
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 3.0e-236 822.4 814 55.3
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 4.9e-234 815.1 804 55.8
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 4.9e-234 815.1 802 56.0
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 3.2e-233 812.4 802 55.9
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 4.1e-233 812.0 818 55.6
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 9.2e-233 810.8 803 55.7
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 8.6e-231 804.3 803 55.7
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 1.4e-228 797.0 818 53.5
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 4.0e-228 795.4 819 52.9
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 4.0e-228 795.4 829 53.2
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 5.2e-228 795.0 803 54.5
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 7.0e-225 784.6 824 53.6
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 1.1e-222 777.3 803 53.9
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 1.1e-222 777.3 801 52.6
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 7.3e-222 774.6 802 53.9
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 1.3e-218 763.8 823 52.4
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 2.4e-217 759.6 792 52.8
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 7.1e-217 758.1 818 50.5
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 7.1e-217 758.1 803 52.1
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.2e-216 757.3 818 50.5
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 4.7e-213 745.3 790 51.6
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 1.4e-212 743.8 806 51.2
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 1.4e-212 743.8 825 50.9
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 1.8e-212 743.4 831 49.6
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 1.8e-212 743.4 831 49.9
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 3.1e-212 742.7 804 52.9
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 8.9e-212 741.1 808 50.4
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 3.4e-211 739.2 799 50.1
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 7.6e-211 738.0 805 51.1
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 7.6e-211 738.0 831 49.9
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 2.2e-210 736.5 807 50.8
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 2.9e-210 736.1 808 50.0
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 2.9e-210 736.1 814 50.4
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 3.2e-209 732.6 804 49.8
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 7.8e-208 728.0 830 48.8
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 5.1e-207 725.3 817 49.6
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 6.6e-207 724.9 805 49.6
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 1.2e-205 720.7 799 49.9
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 1.6e-205 720.3 789 49.9
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 2.1e-205 719.9 789 49.6
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.8e-205 719.5 813 50.8
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 4.7e-205 718.8 824 50.4
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 3.4e-203 712.6 797 50.4
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 1.7e-202 710.3 831 47.8
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 1.7e-202 710.3 809 48.8
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 2.2e-202 709.9 818 48.9
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 2.2e-202 709.9 816 50.7
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 1.2e-200 704.1 802 49.6
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 3.5e-200 702.6 816 50.0
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.0e-199 701.0 753 50.7
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 1.5e-198 697.2 815 49.8
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 4.8e-197 692.2 739 51.0
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 8.1e-197 691.4 802 50.0
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 1.5e-195 687.2 743 51.1
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 2.3e-191 673.3 733 51.2
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 3.7e-189 666.0 813 48.6
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 8.4e-186 654.8 816 46.4
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 8.7e-183 644.8 838 46.8
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 3.5e-176 622.9 803 46.6
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 7.9e-176 621.7 803 46.2
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 2.3e-175 620.2 823 45.8
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 2.6e-171 606.7 819 43.5
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 2.9e-170 603.2 651 52.1
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 7.2e-169 598.6 607 53.7
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 9.1e-164 581.6 619 52.8
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 1.1e-161 574.7 804 41.7
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 3.2e-161 573.2 791 44.6
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 1.7e-146 524.2 614 47.4
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 2.6e-142 510.4 798 37.6
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 3.3e-142 510.0 750 44.5
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.5e-137 494.6 554 50.4
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 3.0e-135 486.9 564 49.3
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 1.2e-126 458.4 394 60.9
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 4.4e-126 456.4 485 52.4
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 1.5e-121 441.4 774 37.7
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 1.3e-109 401.7 514 45.7
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.7e-101 374.8 755 37.6
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.3e-98 365.2 340 57.6
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 4.9e-85 320.1 918 28.1
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 1.3e-80 305.4 275 57.8
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 2.1e-80 304.7 306 53.9
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 1.5e-78 298.5 872 28.1
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 2.7e-75 287.7 487 41.5
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.3e-66 258.8 275 52.7
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 1.8e-63 248.4 807 27.1
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 3.9e-58 230.7 193 62.7
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.9e-57 228.4 199 60.8
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 4.2e-52 210.7 385 35.8
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 2.7e-51 208.0 274 42.7
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 7.9e-51 206.5 587 30.3
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 9.1e-47 193.0 529 26.8
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 4.2e-28 131.0 197 41.6
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 7.7e-22 110.2 626 22.8
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 6.3e-16 90.5 71 60.6
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 5.4e-15 87.4 228 33.8


User provided reference genes

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