Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g28960 Schrenkiella parvula HOM05D003094 ORTHO05D003482 2.7e-70 269.2 136 100.0
Thhalv10019822m.g Eutrema salsugineum HOM05D003094 ORTHO05D003482 1.6e-54 216.9 135 80.0
AL2G33580 Arabidopsis lyrata HOM05D003094 ORTHO05D003482 1.6e-49 200.3 138 73.2
A02p18880 Brassica napus HOM05D003094 ORTHO05D003482 6.6e-48 194.9 137 77.4
BraA02t06932Z Brassica rapa HOM05D003094 ORTHO05D003482 3.6e-46 189.1 134 75.4
BcaC03g15460 Brassica carinata HOM05D003094 ORTHO05D003482 4.7e-46 188.7 135 75.6
BolC2t09174H Brassica oleracea HOM05D003094 ORTHO05D003482 4.7e-46 188.7 135 75.6
C02p31410 Brassica napus HOM05D003094 ORTHO05D003482 2.6e-44 183.0 138 76.1
CARHR066840 Cardamine hirsuta HOM05D003094 ORTHO05D003482 2.7e-41 172.9 136 69.1
BcaB05g24812 Brassica carinata HOM05D003094 ORTHO05D003482 3.0e-40 169.5 150 69.3
AT1G73770 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 4.4e-36 155.6 137 62.0
Carub.0002s2052 Capsella rubella HOM05D003094 ORTHO05D003482 4.4e-36 155.6 146 61.6
Aa31LG4G4100 Aethionema arabicum HOM05D003094 ORTHO05D003482 4.0e-29 132.5 125 58.4
THA.LOC104812151 Tarenaya hassleriana HOM05D003094 ORTHO05D003482 1.1e-21 107.8 147 45.6
Atru.chr9.906 Acer truncatum HOM05D003094 ORTHO05D003482 1.6e-17 94.0 130 46.9
PGR044G0078 Punica granatum HOM05D003094 ORTHO05D003482 8.1e-14 81.6 148 37.2
Gohir.A13G146900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.4e-13 80.9 157 38.9
TWI81G0976 Tripterygium wilfordii HOM05D003094 ORTHO05D003482 1.4e-13 80.9 123 43.1
Carub.0003s1800 Capsella rubella HOM05D003094 ORTHO05D003482 1.8e-13 80.5 147 37.4
Thecc.07G091700 Theobroma cacao HOM05D003094 ORTHO05D003482 1.8e-13 80.5 151 37.7
Gohir.D13G152004 Gossypium hirsutum HOM05D003094 ORTHO05D003482 3.1e-13 79.7 157 38.9
Gohir.D13G151300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 4.0e-13 79.3 157 38.2
AT3G18240 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 5.3e-13 79.0 145 37.9
EL10Ac7g16627 Beta vulgaris HOM05D003094 ORTHO05D003482 6.9e-13 78.6 161 37.3
Duzib213G0897 Durio zibethinus HOM05D003094 ORTHO05D003482 6.9e-13 78.6 137 37.2
AL3G31470 Arabidopsis lyrata HOM05D003094 ORTHO05D003482 9.0e-13 78.2 148 36.5
Gohir.A07G059300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.2e-12 77.8 119 40.3
Gorai.002G151500 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.2e-12 77.8 137 40.1
Gohir.A13G146300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.5e-12 77.4 157 37.6
Gorai.001G067600 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.5e-12 77.4 106 43.4
Gorai.013G170500 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.5e-12 77.4 157 37.6
Gorai.013G169300 Gossypium raimondii HOM05D003094 ORTHO05D003482 2.0e-12 77.0 154 38.3
EL10Ac4g10181 Beta vulgaris HOM05D003094 ORTHO05D003482 2.6e-12 76.6 161 36.6
AUR62042498 Chenopodium quinoa HOM05D003094 ORTHO05D003482 2.6e-12 76.6 151 37.1
Gohir.D07G064100 Gossypium hirsutum HOM05D003094 ORTHO05D003482 4.5e-12 75.9 106 42.5
Cpa.g.sc3.463 Carica papaya HOM05D003094 ORTHO05D003482 7.6e-12 75.1 134 38.8
Atru.chr9.905 Acer truncatum HOM05D003094 ORTHO05D003482 1.3e-11 74.3 151 37.1
Dinv07353 Davidia involucrata HOM05D003094 ORTHO05D003482 1.7e-11 73.9 123 43.1
Dinv09627 Davidia involucrata HOM05D003094 ORTHO05D003482 2.2e-11 73.6 123 43.9
Duzib084G0458 Durio zibethinus HOM05D003094 ORTHO05D003482 2.9e-11 73.2 98 45.9
Glyma.05G139400 Glycine max HOM05D003094 ORTHO05D003482 2.9e-11 73.2 135 34.8
Glyma.08G094700 Glycine max HOM05D003094 ORTHO05D003482 4.9e-11 72.4 135 37.8
Dinv17506 Davidia involucrata HOM05D003094 ORTHO05D003482 6.4e-11 72.0 149 39.6
Psat7g083520 Pisum sativum HOM05D003094 ORTHO05D003482 8.4e-11 71.6 141 39.7
Sed0020442 Sechium edule HOM05D003094 ORTHO05D003482 8.4e-11 71.6 157 33.8
Ca_11586_v3 Cicer arietinum L. HOM05D003094 ORTHO05D003482 1.1e-10 71.2 139 41.7
VMungo0251G1973 Vigna mungo HOM05D003094 ORTHO05D003482 1.1e-10 71.2 129 38.0
C05p47760 Brassica napus HOM05D003094 ORTHO05D003482 1.4e-10 70.9 157 34.4
AUR62040348 Chenopodium quinoa HOM05D003094 ORTHO05D003482 1.4e-10 70.9 151 35.8
THA.LOC104820380 Tarenaya hassleriana HOM05D003094 ORTHO05D003482 1.9e-10 70.5 146 39.0
BcaC05g28648 Brassica carinata HOM05D003094 ORTHO05D003482 2.4e-10 70.1 156 34.0
ClCG06G014600 Citrullus lanatus HOM05D003094 ORTHO05D003482 2.4e-10 70.1 149 38.9
TWI60G1358 Tripterygium wilfordii HOM05D003094 ORTHO05D003482 2.4e-10 70.1 147 34.7
AT4G21460 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 3.2e-10 69.7 143 37.1
BolC5t33491H Brassica oleracea HOM05D003094 ORTHO05D003482 4.2e-10 69.3 152 36.2
Ciclev10020325m.g Citrus clementina HOM05D003094 ORTHO05D003482 5.4e-10 68.9 151 34.4
MELO3C002109.2 Cucumis melo HOM05D003094 ORTHO05D003482 5.4e-10 68.9 97 42.3
Ah.11g047710 Amaranthus hybridus HOM05D003094 ORTHO05D003482 7.1e-10 68.6 95 44.2
CARHR093590 Cardamine hirsuta HOM05D003094 ORTHO05D003482 7.1e-10 68.6 161 32.3
COL.COLO4_27184 Corchorus olitorius HOM05D003094 ORTHO05D003482 7.1e-10 68.6 155 36.1
Phvul.002G182800 Phaseolus vulgaris HOM05D003094 ORTHO05D003482 7.1e-10 68.6 139 35.3
TAR374G0309 Trochodendron aralioides HOM05D003094 ORTHO05D003482 7.1e-10 68.6 147 36.1
BraA05t21983Z Brassica rapa HOM05D003094 ORTHO05D003482 9.3e-10 68.2 149 35.6
CiPaw.16G089100 Carya illinoinensis HOM05D003094 ORTHO05D003482 9.3e-10 68.2 148 35.8
CsaV3_1G006930 Cucumis sativus L. HOM05D003094 ORTHO05D003482 9.3e-10 68.2 106 39.6
MD06G1220600 Malus domestica HOM05D003094 ORTHO05D003482 9.3e-10 68.2 135 37.0
TAR374G0733 Trochodendron aralioides HOM05D003094 ORTHO05D003482 9.3e-10 68.2 148 37.2
A05p31440 Brassica napus HOM05D003094 ORTHO05D003482 1.2e-09 67.8 149 35.6
ECA238G4750 Erigeron canadensis HOM05D003094 ORTHO05D003482 1.2e-09 67.8 126 38.1
MD06G1220500 Malus domestica HOM05D003094 ORTHO05D003482 1.6e-09 67.4 152 37.5
Thhalv10020806m.g Eutrema salsugineum HOM05D003094 ORTHO05D003482 2.1e-09 67.0 85 42.4
Sp3g16360 Schrenkiella parvula HOM05D003094 ORTHO05D003482 2.1e-09 67.0 159 32.1
Sed0019035 Sechium edule HOM05D003094 ORTHO05D003482 2.1e-09 67.0 96 43.8
arahy.Tifrunner.gnm1.ann1.D1K70W Arachis hypogaea HOM05D003094 ORTHO05D003482 2.7e-09 66.6 131 37.4
vmacro16434 Vaccinium macrocarpon HOM05D003094 ORTHO05D003482 2.7e-09 66.6 87 46.0
MD14G1229900 Malus domestica HOM05D003094 ORTHO05D003482 3.5e-09 66.2 149 36.9
Peaxi162Scf00683g00019 Petunia axillaris HOM05D003094 ORTHO05D003482 3.5e-09 66.2 129 36.4
MELO3C017325.2 Cucumis melo HOM05D003094 ORTHO05D003482 4.6e-09 65.9 158 33.5
Rhsim10G0183200 Rhododendron simsii HOM05D003094 ORTHO05D003482 4.6e-09 65.9 68 48.5
arahy.Tifrunner.gnm1.ann1.2IG2A1 Arachis hypogaea HOM05D003094 ORTHO05D003482 6.0e-09 65.5 131 36.6
COL.COLO4_38537 Corchorus olitorius HOM05D003094 ORTHO05D003482 6.0e-09 65.5 87 46.0
CiPaw.16G089200 Carya illinoinensis HOM05D003094 ORTHO05D003482 7.9e-09 65.1 150 38.0
Actinidia19943 Actinidia chinensis HOM05D003094 ORTHO05D003482 1.0e-08 64.7 77 45.5
TPR.G35824 Trifolium pratense HOM05D003094 ORTHO05D003482 1.0e-08 64.7 131 34.4
GSVIVG01008338001 Vitis vinifera HOM05D003094 ORTHO05D003482 1.0e-08 64.7 96 44.8
Actinidia36579 Actinidia chinensis HOM05D003094 ORTHO05D003482 1.3e-08 64.3 77 45.5
CANSAT80G1577 Cannabis sativa HOM05D003094 ORTHO05D003482 1.3e-08 64.3 146 32.2
Ciclev10023622m.g Citrus clementina HOM05D003094 ORTHO05D003482 1.3e-08 64.3 72 50.0
Cc04_g06860 Coffea canephora HOM05D003094 ORTHO05D003482 1.3e-08 64.3 68 47.1
Hund02353 Selenicereus undatus HOM05D003094 ORTHO05D003482 1.3e-08 64.3 100 42.0
MBI16_g44830_MAGBIO Magnolia biondii HOM05D003094 ORTHO05D003482 1.8e-08 63.9 75 46.7
Manes.01G015200 Manihot esculenta HOM05D003094 ORTHO05D003482 1.8e-08 63.9 104 41.3
Nitab4.5_0001986g0080 Nicotiana tabacum HOM05D003094 ORTHO05D003482 1.8e-08 63.9 137 35.8
RcHm_v2.0_Chr2g0128201 Rosa chinensis HOM05D003094 ORTHO05D003482 1.8e-08 63.9 158 32.3
Aa31LG8G5090 Aethionema arabicum HOM05D003094 ORTHO05D003482 2.3e-08 63.5 147 34.0
Cpa.g.sc51.5 Carica papaya HOM05D003094 ORTHO05D003482 2.3e-08 63.5 149 37.6
Manes.05G133000 Manihot esculenta HOM05D003094 ORTHO05D003482 2.3e-08 63.5 143 37.8
Rhsim12G0141600 Rhododendron simsii HOM05D003094 ORTHO05D003482 2.3e-08 63.5 75 48.0
Prupe.5G225000 Prunus persica HOM05D003094 ORTHO05D003482 3.0e-08 63.2 141 34.8
Sabra15G0041200 Salix brachista HOM05D003094 ORTHO05D003482 3.0e-08 63.2 160 34.4
Hund11930 Selenicereus undatus HOM05D003094 ORTHO05D003482 3.0e-08 63.2 134 39.6
Dinv12225 Davidia involucrata HOM05D003094 ORTHO05D003482 3.9e-08 62.8 147 33.3
FAN18G0043 Fragaria x ananassa HOM05D003094 ORTHO05D003482 5.1e-08 62.4 115 37.4
PSO063G0897 Papaver somniferum HOM05D003094 ORTHO05D003482 5.1e-08 62.4 162 31.5
ATR0757G079 Amborella trichopoda HOM05D003094 ORTHO05D003482 6.7e-08 62.0 70 47.1
EL10Ac5g11481 Beta vulgaris HOM05D003094 ORTHO05D003482 6.7e-08 62.0 126 38.1
CSS0029576 Camellia sinensis var. sinensis HOM05D003094 ORTHO05D003482 6.7e-08 62.0 68 50.0
ClCG04G010900 Citrullus lanatus HOM05D003094 ORTHO05D003482 8.7e-08 61.6 113 34.5
Cfa019732 Carpinus fangiana HOM05D003094 ORTHO05D003482 1.1e-07 61.2 68 48.5
Haze_18734 Corylus avellana HOM05D003094 ORTHO05D003482 1.1e-07 61.2 175 30.9
FvH4_6g26830 Fragaria vesca HOM05D003094 ORTHO05D003482 1.1e-07 61.2 68 39.7
FAN14G2495 Fragaria x ananassa HOM05D003094 ORTHO05D003482 1.1e-07 61.2 68 39.7
Sc10g0009380 Simmondsia chinensis HOM05D003094 ORTHO05D003482 1.1e-07 61.2 89 42.7
Actinidia35101 Actinidia chinensis HOM05D003094 ORTHO05D003482 1.5e-07 60.8 67 46.3
FAN08G1507 Fragaria x ananassa HOM05D003094 ORTHO05D003482 1.5e-07 60.8 126 34.1
FAN13G1164 Fragaria x ananassa HOM05D003094 ORTHO05D003482 1.5e-07 60.8 115 36.5
Gorai.003G056600 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.5e-07 60.8 105 40.0
PSO017G6706 Papaver somniferum HOM05D003094 ORTHO05D003482 1.5e-07 60.8 162 30.2
Potri.015G044100 Populus trichocarpa HOM05D003094 ORTHO05D003482 1.5e-07 60.8 160 35.0
unitig_21.g20424 Utricularia gibba HOM05D003094 ORTHO05D003482 1.5e-07 60.8 148 33.8
Eucgr.K02236 Eucalyptus grandis HOM05D003094 ORTHO05D003482 1.9e-07 60.5 68 50.0
Lj9A424T34 Lonicera japonica HOM05D003094 ORTHO05D003482 1.9e-07 60.5 64 48.4
Cfa019731 Carpinus fangiana HOM05D003094 ORTHO05D003482 2.5e-07 60.1 151 36.4
FAN02G1016 Fragaria x ananassa HOM05D003094 ORTHO05D003482 3.3e-07 59.7 68 38.2
RcHm_v2.0_Chr7g0179411 Rosa chinensis HOM05D003094 ORTHO05D003482 3.3e-07 59.7 120 37.5
SHI53281 Sapria himalayana HOM05D003094 ORTHO05D003482 3.3e-07 59.7 150 30.7
Solyc03g119170.3 Solanum lycopersicum HOM05D003094 ORTHO05D003482 3.3e-07 59.7 74 40.5
Sopen03g038060 Solanum pennellii HOM05D003094 ORTHO05D003482 3.3e-07 59.7 74 40.5
PGSC0003DMG402005733 Solanum tuberosum HOM05D003094 ORTHO05D003482 3.3e-07 59.7 74 40.5
FvH4_5g16690 Fragaria vesca HOM05D003094 ORTHO05D003482 4.3e-07 59.3 115 36.5
FAN05G2182 Fragaria x ananassa HOM05D003094 ORTHO05D003482 4.3e-07 59.3 77 33.8
Lj4g0013095 Lotus japonicus HOM05D003094 ORTHO05D003482 4.3e-07 59.3 148 35.8
Nitab4.5_0001986g0070 Nicotiana tabacum HOM05D003094 ORTHO05D003482 4.3e-07 59.3 68 41.2
Nitab4.5_0004955g0040 Nicotiana tabacum HOM05D003094 ORTHO05D003482 4.3e-07 59.3 68 41.2
Peaxi162Scf00683g00159 Petunia axillaris HOM05D003094 ORTHO05D003482 4.3e-07 59.3 68 39.7
QL10p026547 Quercus lobata HOM05D003094 ORTHO05D003482 4.3e-07 59.3 151 32.5
SGA_v2.0_scaffold29G12062 Striga asiatica HOM05D003094 ORTHO05D003482 4.3e-07 59.3 164 30.5
Haze_18735 Corylus avellana HOM05D003094 ORTHO05D003482 5.6e-07 58.9 122 36.9
ECA233G5083 Erigeron canadensis HOM05D003094 ORTHO05D003482 7.4e-07 58.5 76 43.4
CDE11G0955 Ceratophyllum demersum HOM05D003094 ORTHO05D003482 9.6e-07 58.2 141 32.6
Solyc03g119160.3 Solanum lycopersicum HOM05D003094 ORTHO05D003482 9.6e-07 58.2 94 38.3
TPR.G5116 Trifolium pratense HOM05D003094 ORTHO05D003482 9.6e-07 58.2 140 35.7
Cc04_g06850 Coffea canephora HOM05D003094 ORTHO05D003482 1.3e-06 57.8 128 34.4
Gorai.001G159100 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.6e-06 57.4 72 43.1
Gorai.012G098500 Gossypium raimondii HOM05D000575 ORTHO05D003482 1.6e-06 57.4 68 45.6
Sopen03g038050 Solanum pennellii HOM05D003094 ORTHO05D003482 1.6e-06 57.4 94 38.3
Oeu052057.1 Olea europaea HOM05D003094 ORTHO05D003482 2.1e-06 57.0 159 31.4
CsaV3_1G004020 Cucumis sativus L. HOM05D003094 ORTHO05D003482 2.8e-06 56.6 165 32.7
FAN04G1950 Fragaria x ananassa HOM05D003094 ORTHO05D003482 2.8e-06 56.6 113 36.3
Gohir.D10G153150 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.8e-06 56.6 65 44.6
CAN.G1129.13 Capsicum annuum HOM05D003094 ORTHO05D003482 3.6e-06 56.2 64 42.2
vmacro07219 Vaccinium macrocarpon HOM05D003094 ORTHO05D003482 3.6e-06 56.2 69 44.9
Gohir.D09G047900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 4.8e-06 55.8 118 31.4
Lsat_1_v5_gn_2_64400 Lactuca sativa HOM05D003094 ORTHO05D003482 4.8e-06 55.8 78 34.6
PGSC0003DMG401005733 Solanum tuberosum HOM05D003094 ORTHO05D003482 4.8e-06 55.8 103 41.7
Gohir.A02G112001 Gossypium hirsutum HOM05D003094 ORTHO05D003482 6.2e-06 55.5 68 44.1
Migut.D00778 Erythranthe guttata HOM05D003094 ORTHO05D003482 8.1e-06 55.1 74 41.9
QL10p026559 Quercus lobata HOM05D003094 ORTHO05D003482 8.1e-06 55.1 91 37.4
Sc04g0003380 Simmondsia chinensis HOM05D003094 ORTHO05D003482 8.1e-06 55.1 90 41.1


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