Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g27950 Schrenkiella parvula HOM05D000140 ORTHO05D008077 6.7e-136 487.3 233 100.0
AL2G32740 Arabidopsis lyrata HOM05D000140 ORTHO05D008077 2.1e-49 199.9 128 73.4
BolC6t38553H Brassica oleracea HOM05D000140 ORTHO05D008077 3.1e-48 196.1 135 69.6
BcaC08g45680 Brassica carinata HOM05D000140 ORTHO05D008077 1.2e-47 194.1 135 68.9
C06p34430 Brassica napus HOM05D000140 ORTHO05D008077 1.2e-47 194.1 135 68.9
Thhalv10018211m.g Eutrema salsugineum HOM05D000140 ORTHO05D008077 1.2e-47 194.1 155 63.9
A07p30010 Brassica napus HOM05D000140 ORTHO05D008077 5.8e-47 191.8 135 67.4
BraA07t30639Z Brassica rapa HOM05D000140 ORTHO05D008077 5.8e-47 191.8 135 67.4
Carub.0002s1975 Capsella rubella HOM05D000140 ORTHO05D008077 1.3e-46 190.7 135 68.9
AT1G72990 Arabidopsis thaliana HOM05D000140 ORTHO05D008077 6.5e-46 188.3 135 68.1
BcaB03g15696 Brassica carinata HOM05D000140 ORTHO05D008077 7.1e-45 184.9 134 68.7
Aa31LG4G3250 Aethionema arabicum HOM05D000140 ORTHO05D008077 2.8e-41 172.9 131 63.4
THA.LOC104812215 Tarenaya hassleriana HOM05D000140 ORTHO05D008077 9.7e-34 147.9 136 52.9
arahy.Tifrunner.gnm1.ann1.3G454N Arachis hypogaea HOM05D000140 ORTHO05D008077 2.0e-31 140.2 136 49.3
arahy.Tifrunner.gnm1.ann1.GQ1CY0 Arachis hypogaea HOM05D000140 ORTHO05D008077 3.4e-31 139.4 136 49.3
Atru.chr1.3755 Acer truncatum HOM05D000140 ORTHO05D008077 8.5e-30 134.8 145 47.6
Ciclev10024990m.g Citrus clementina HOM05D000140 ORTHO05D008077 2.5e-29 133.3 141 47.5
QL05p012092 Quercus lobata HOM05D000140 ORTHO05D008077 1.2e-28 131.0 133 47.4
Potri.003G037000 Populus trichocarpa HOM05D000140 ORTHO05D008077 1.6e-28 130.6 142 47.9
Lj3g0010439 Lotus japonicus HOM05D000140 ORTHO05D008077 2.7e-28 129.8 139 44.6
CiPaw.01G224300 Carya illinoinensis HOM05D000140 ORTHO05D008077 3.6e-28 129.4 139 46.0
Cfa003578 Carpinus fangiana HOM05D000140 ORTHO05D008077 7.9e-28 128.3 135 46.7
Haze_15961 Corylus avellana HOM05D000140 ORTHO05D008077 1.0e-27 127.9 135 46.7
Atru.chr1.3737 Acer truncatum HOM05D000140 ORTHO05D008077 1.4e-27 127.5 145 44.1
CANSAT56G4101 Cannabis sativa HOM05D000140 ORTHO05D008077 5.1e-27 125.6 141 44.0
TPR.G6582 Trifolium pratense HOM05D000140 ORTHO05D008077 5.1e-27 125.6 139 43.2
Medtr2g100000 Medicago truncatula HOM05D000140 ORTHO05D008077 6.7e-27 125.2 139 43.9
Sabra03G0023800 Salix brachista HOM05D000140 ORTHO05D008077 6.7e-27 125.2 149 42.3
Psat5g292840 Pisum sativum HOM05D000140 ORTHO05D008077 8.8e-27 124.8 136 45.6
TWI31G0962 Tripterygium wilfordii HOM05D000140 ORTHO05D008077 2.0e-26 123.6 139 46.0
AUR62038142 Chenopodium quinoa HOM05D000140 ORTHO05D008077 2.6e-26 123.2 139 42.4
CsaV3_3G043840 Cucumis sativus L. HOM05D000140 ORTHO05D008077 2.6e-26 123.2 137 45.3
HanXRQChr16g0514871 Helianthus annuus HOM05D000140 ORTHO05D008077 2.6e-26 123.2 129 46.5
TAR624G1234 Trochodendron aralioides HOM05D000140 ORTHO05D008077 2.6e-26 123.2 139 42.4
Gohir.D05G137000 Gossypium hirsutum HOM05D000140 ORTHO05D008077 3.3e-26 122.9 139 43.2
Hma1.2p1_0496F.1_g165850 Hydrangea macrophylla HOM05D000140 ORTHO05D008077 3.3e-26 122.9 141 44.7
MELO3C025840.2 Cucumis melo HOM05D000140 ORTHO05D008077 4.4e-26 122.5 137 45.3
Gohir.A05G135000 Gossypium hirsutum HOM05D000140 ORTHO05D008077 4.4e-26 122.5 139 43.2
Rhsim12G0206500 Rhododendron simsii HOM05D001215 ORTHO05D008077 4.4e-26 122.5 142 44.4
Ca_01204_v3 Cicer arietinum L. HOM05D000140 ORTHO05D008077 5.7e-26 122.1 139 41.7
COL.COLO4_30668 Corchorus olitorius HOM05D000140 ORTHO05D008077 5.7e-26 122.1 140 42.9
QL05p012111 Quercus lobata HOM05D000140 ORTHO05D008077 5.7e-26 122.1 137 44.5
ClCG07G013770 Citrullus lanatus HOM05D000140 ORTHO05D008077 7.4e-26 121.7 137 45.3
Dinv30373 Davidia involucrata HOM05D000140 ORTHO05D008077 7.4e-26 121.7 141 42.6
Glyma.13G349600 Glycine max HOM05D000140 ORTHO05D008077 7.4e-26 121.7 137 43.1
CSS0012901 Camellia sinensis var. sinensis HOM05D000140 ORTHO05D008077 9.7e-26 121.3 141 43.3
Gorai.009G141300 Gossypium raimondii HOM05D000140 ORTHO05D008077 9.7e-26 121.3 139 43.2
AUR62009830 Chenopodium quinoa HOM05D000140 ORTHO05D008077 1.3e-25 120.9 139 41.0
Eucgr.J02852 Eucalyptus grandis HOM05D000140 ORTHO05D008077 1.7e-25 120.6 137 43.8
vmacro17024 Vaccinium macrocarpon HOM05D000140 ORTHO05D008077 1.7e-25 120.6 140 42.1
VMungo1080G0937 Vigna mungo HOM05D000140 ORTHO05D008077 1.7e-25 120.6 142 40.8
Aqoxy7G04010 Aquilegia oxysepala HOM05D000140 ORTHO05D008077 2.2e-25 120.2 143 39.9
Manes.11G025700 Manihot esculenta HOM05D000140 ORTHO05D008077 2.2e-25 120.2 140 44.3
PGR102G2012 Punica granatum HOM05D000140 ORTHO05D008077 2.2e-25 120.2 136 44.9
Sed0001524 Sechium edule HOM05D000140 ORTHO05D008077 2.2e-25 120.2 138 45.7
Duzib235G0366 Durio zibethinus HOM05D000140 ORTHO05D008077 4.8e-25 119.0 140 41.4
Nn8g38831 Nelumbo nucifera HOM05D000140 ORTHO05D008077 8.2e-25 118.2 141 40.4
Peaxi162Scf00207g01364 Petunia axillaris HOM05D000140 ORTHO05D008077 1.1e-24 117.9 138 43.5
Actinidia09033 Actinidia chinensis HOM05D000140 ORTHO05D008077 1.4e-24 117.5 141 41.1
PGSC0003DMG400004881 Solanum tuberosum HOM05D000140 ORTHO05D008077 1.4e-24 117.5 142 43.7
Thecc.06G112300 Theobroma cacao HOM05D000140 ORTHO05D008077 1.4e-24 117.5 140 41.4
Nitab4.5_0008454g0020 Nicotiana tabacum HOM05D000140 ORTHO05D008077 1.8e-24 117.1 141 42.6
Lalb_Chr24g0396441 Lupinus albus HOM05D000140 ORTHO05D008077 3.1e-24 116.3 138 41.3
PSO210G7565 Papaver somniferum HOM05D000140 ORTHO05D008077 3.1e-24 116.3 141 41.8
Phvul.005G158700 Phaseolus vulgaris HOM05D000140 ORTHO05D008077 3.1e-24 116.3 142 40.1
PSO210G3869 Papaver somniferum HOM05D000140 ORTHO05D008077 5.3e-24 115.5 141 41.8
EL10Ac7g16346 Beta vulgaris HOM05D000140 ORTHO05D008077 1.2e-23 114.4 140 39.3
MBI01_g01259_MAGBIO Magnolia biondii HOM05D000140 ORTHO05D008077 1.2e-23 114.4 122 42.6
Hund18711 Selenicereus undatus HOM05D000140 ORTHO05D008077 1.2e-23 114.4 142 41.5
Sopen06g022120 Solanum pennellii HOM05D000140 ORTHO05D008077 1.2e-23 114.4 142 43.0
FvH4_6g33540 Fragaria vesca HOM05D000140 ORTHO05D008077 3.4e-23 112.8 141 41.1
FAN14G2243 Fragaria x ananassa HOM05D000140 ORTHO05D008077 3.4e-23 112.8 141 41.1
Solyc06g062660.4 Solanum lycopersicum HOM05D000140 ORTHO05D008077 3.4e-23 112.8 142 42.3
CAN.G825.37 Capsicum annuum HOM05D000140 ORTHO05D008077 4.5e-23 112.5 138 42.0
Duzib192G0008 Durio zibethinus HOM05D000140 ORTHO05D008077 4.5e-23 112.5 140 40.7
Nitab4.5_0000255g0220 Nicotiana tabacum HOM05D000140 ORTHO05D008077 4.5e-23 112.5 141 42.6
FAN09G3885 Fragaria x ananassa HOM05D000140 ORTHO05D008077 5.9e-23 112.1 141 40.4
RcHm_v2.0_Chr2g0143451 Rosa chinensis HOM05D000140 ORTHO05D008077 7.7e-23 111.7 139 41.0
GSVIVG01016865001 Vitis vinifera HOM05D000140 ORTHO05D008077 7.7e-23 111.7 140 40.7
ECA232G0751 Erigeron canadensis HOM05D000140 ORTHO05D008077 1.0e-22 111.3 142 42.3
Cc04_g01880 Coffea canephora HOM05D000140 ORTHO05D008077 1.3e-22 110.9 136 44.1
FAN02G0242 Fragaria x ananassa HOM05D000140 ORTHO05D008077 1.3e-22 110.9 141 40.4
FAN05G3919 Fragaria x ananassa HOM05D000140 ORTHO05D008077 2.2e-22 110.2 141 40.4
Oeu011886.1 Olea europaea HOM05D000140 ORTHO05D008077 3.8e-22 109.4 137 38.7
HanXRQChr05g0140791 Helianthus annuus HOM05D000140 ORTHO05D008077 5.0e-22 109.0 136 45.6
Lsat_1_v5_gn_0_11160 Lactuca sativa HOM05D000140 ORTHO05D008077 5.0e-22 109.0 141 43.3
SalBow6G5199 Salvia bowleyana HOM05D000140 ORTHO05D008077 8.5e-22 108.2 141 40.4
SalBow6G5580 Salvia bowleyana HOM05D000140 ORTHO05D008077 1.4e-21 107.5 141 40.4
DCAR_000353 Daucus carota HOM05D000140 ORTHO05D008077 2.5e-21 106.7 139 40.3
DCAR_016153 Daucus carota HOM05D000140 ORTHO05D008077 2.5e-21 106.7 139 40.3
Prupe.3G048800 Prunus persica HOM05D000140 ORTHO05D008077 2.5e-21 106.7 141 41.1
Migut.I01031 Erythranthe guttata HOM05D000140 ORTHO05D008077 5.5e-21 105.5 134 40.3
MD09G1192500 Malus domestica HOM05D000140 ORTHO05D008077 1.6e-20 104.0 142 39.4
Os05g0539400 Oryza sativa ssp. japonica HOM05D000140 ORTHO05D008077 1.0e-19 101.3 149 38.9
Lj5A44G111 Lonicera japonica HOM05D000140 ORTHO05D008077 2.3e-19 100.1 138 42.8
unitig_0.g871 Utricularia gibba HOM05D000140 ORTHO05D008077 3.0e-19 99.8 129 41.1
HPP92_005527 Vanilla planifolia HOM05D000140 ORTHO05D008077 1.1e-18 97.8 138 40.6
Zm00001eb294210 Zea mays HOM05D000140 ORTHO05D008077 1.5e-18 97.4 149 36.9
Cpa.g.sc25.44 Carica papaya HOM05D000140 ORTHO05D008077 4.8e-17 92.4 96 46.9
ATR0716G096 Amborella trichopoda HOM05D000140 ORTHO05D008077 4.1e-16 89.4 133 35.3
Actinidia26056 Actinidia chinensis HOM05D000140 ORTHO05D008077 2.2e-14 83.6 127 36.2
Sc15g0000170 Simmondsia chinensis HOM05D000140 ORTHO05D008077 1.5e-13 80.9 96 40.6
Pp3c13_7050 Physcomitrium patens HOM05D000140 ORTHO05D008077 2.1e-12 77.0 72 48.6
CBR_g21797 Chara braunii HOM05D000019 ORTHO05D000353 4.7e-12 75.9 83 43.4
SMO351G0560 Selaginella moellendorffii HOM05D000140 ORTHO05D008077 1.4e-11 74.3 83 44.6
Pp3c26_2000 Physcomitrium patens HOM05D000140 ORTHO05D008077 1.8e-11 73.9 72 45.8


User provided reference genes

Program Settings