Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g27700 Schrenkiella parvula HOM05D006979 ORTHO05D008857 7.8e-164 580.5 311 100.0
Carub.0002s1948 Capsella rubella HOM05D006979 ORTHO05D008857 2.7e-148 528.9 311 88.4
AL2G32310 Arabidopsis lyrata HOM05D006979 ORTHO05D008857 1.7e-147 526.2 312 87.5
BcaNung07150 Brassica carinata HOM05D006979 ORTHO05D008857 1.7e-142 509.6 312 85.6
C06p46960 Brassica napus HOM05D006979 ORTHO05D008857 7.1e-141 504.2 312 85.6
BolC6t39737H Brassica oleracea HOM05D006979 ORTHO05D008857 7.1e-141 504.2 312 85.6
A07p38800 Brassica napus HOM05D006979 ORTHO05D008857 1.6e-140 503.1 334 79.9
BraA07t31434Z Brassica rapa HOM05D006979 ORTHO05D008857 1.6e-140 503.1 334 79.9
BcaC08g46707 Brassica carinata HOM05D006979 ORTHO05D008857 4.6e-140 501.5 312 85.9
Thhalv10018914m.g Eutrema salsugineum HOM05D006979 ORTHO05D008857 5.8e-135 484.6 287 87.8
Aa31LG4G3010 Aethionema arabicum HOM05D006979 ORTHO05D008857 2.6e-127 459.1 315 77.5
THA.LOC104813956 Tarenaya hassleriana HOM05D006979 ORTHO05D008857 3.5e-116 422.2 310 74.5
AT1G72640 Arabidopsis thaliana HOM05D006979 ORTHO05D008857 6.7e-115 417.9 263 84.4
Cpa.g.sc25.110 Carica papaya HOM05D006979 ORTHO05D008857 1.0e-99 367.5 313 62.0
Ciclev10026147m.g Citrus clementina HOM05D006979 ORTHO05D008857 2.2e-94 349.7 307 59.6
Sabra03G0037400 Salix brachista HOM05D006979 ORTHO05D008857 6.5e-94 348.2 307 59.6
Potri.003G063800 Populus trichocarpa HOM05D006979 ORTHO05D008857 7.2e-93 344.7 306 58.8
Atru.chr1.3953 Acer truncatum HOM05D006979 ORTHO05D008857 3.6e-92 342.4 316 57.6
CARHR065560 Cardamine hirsuta HOM05D006979 ORTHO05D008857 4.7e-92 342.0 196 89.8
Duzib235G1224 Durio zibethinus HOM05D006979 ORTHO05D008857 2.8e-89 332.8 305 59.7
FAN09G4734 Fragaria x ananassa HOM05D006979 ORTHO05D008857 2.8e-89 332.8 292 59.2
Manes.11G021300 Manihot esculenta HOM05D006979 ORTHO05D008857 6.3e-89 331.6 305 58.0
FvH4_6g34590 Fragaria vesca HOM05D006979 ORTHO05D008857 8.2e-89 331.3 298 59.1
Medtr8g019510 Medicago truncatula HOM05D006979 ORTHO05D008857 8.2e-89 331.3 272 62.5
RcHm_v2.0_Chr2g0145111 Rosa chinensis HOM05D006979 ORTHO05D008857 8.2e-89 331.3 293 59.0
MD09G1184500 Malus domestica HOM05D006979 ORTHO05D008857 2.4e-88 329.7 307 57.3
AUR62001490 Chenopodium quinoa HOM05D006979 ORTHO05D008857 4.1e-88 328.9 274 61.3
Lj3g0022239 Lotus japonicus HOM05D006979 ORTHO05D008857 7.0e-88 328.2 269 61.7
Eucgr.F03173 Eucalyptus grandis HOM05D006979 ORTHO05D008857 9.1e-88 327.8 278 62.6
Thecc.06G118900 Theobroma cacao HOM05D006979 ORTHO05D008857 9.1e-88 327.8 309 57.0
Prupe.3G042700 Prunus persica HOM05D006979 ORTHO05D008857 3.5e-87 325.9 309 56.3
Rhsim08G0237900 Rhododendron simsii HOM05D006979 ORTHO05D008857 4.5e-87 325.5 272 60.7
Cfa003539 Carpinus fangiana HOM05D006979 ORTHO05D008857 5.9e-87 325.1 301 56.5
Phvul.010G133500 Phaseolus vulgaris HOM05D006979 ORTHO05D008857 5.9e-87 325.1 270 60.7
SGA_v2.0_scaffold4G02061 Striga asiatica HOM05D006979 ORTHO05D008857 5.9e-87 325.1 273 61.2
vmacro15023 Vaccinium macrocarpon HOM05D006979 ORTHO05D008857 7.7e-87 324.7 305 55.7
Lalb_Chr04g0263421 Lupinus albus HOM05D006979 ORTHO05D008857 1.3e-86 323.9 300 58.3
AUR62009880 Chenopodium quinoa HOM05D006979 ORTHO05D008857 2.2e-86 323.2 275 60.0
TAR383G0452 Trochodendron aralioides HOM05D006979 ORTHO05D008857 2.2e-86 323.2 296 59.5
GSVIVG01016774001 Vitis vinifera HOM05D006979 ORTHO05D008857 2.9e-86 322.8 303 56.4
Gohir.D05G142800 Gossypium hirsutum HOM05D006979 ORTHO05D008857 3.8e-86 322.4 308 56.5
Gorai.009G146700 Gossypium raimondii HOM05D006979 ORTHO05D008857 5.0e-86 322.0 308 56.5
Actinidia32181 Actinidia chinensis HOM05D006979 ORTHO05D008857 6.5e-86 321.6 268 61.6
Glyma.07G036000 Glycine max HOM05D006979 ORTHO05D008857 1.1e-85 320.9 298 57.4
TPR.G16442 Trifolium pratense HOM05D006979 ORTHO05D008857 1.5e-85 320.5 313 55.6
CiPaw.01G219600 Carya illinoinensis HOM05D006979 ORTHO05D008857 1.9e-85 320.1 257 60.3
COL.COLO4_30769 Corchorus olitorius HOM05D006979 ORTHO05D008857 3.2e-85 319.3 309 56.3
Glyma.16G005300 Glycine max HOM05D006979 ORTHO05D008857 5.5e-85 318.5 313 55.0
CANSAT56G2284 Cannabis sativa HOM05D006979 ORTHO05D008857 1.2e-84 317.4 296 56.1
Dinv04035 Davidia involucrata HOM05D006979 ORTHO05D008857 1.6e-84 317.0 263 60.8
TWI31G0112 Tripterygium wilfordii HOM05D006979 ORTHO05D008857 1.6e-84 317.0 300 57.3
Migut.D00941 Erythranthe guttata HOM05D006979 ORTHO05D008857 4.7e-84 315.5 272 59.2
CSS0018635 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 8.0e-84 314.7 309 55.7
CSS0026622 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 8.0e-84 314.7 309 55.7
PGSC0003DMG400011606 Solanum tuberosum HOM05D006979 ORTHO05D008857 1.0e-83 314.3 261 60.5
FAN05G0457 Fragaria x ananassa HOM05D006979 ORTHO05D008857 3.0e-83 312.8 277 59.9
Sed0019772 Sechium edule HOM05D006979 ORTHO05D008857 3.0e-83 312.8 269 58.7
Nitab4.5_0001199g0130 Nicotiana tabacum HOM05D006979 ORTHO05D008857 5.2e-83 312.0 259 59.1
CAN.G1368.7 Capsicum annuum HOM05D006979 ORTHO05D008857 6.8e-83 311.6 270 57.4
Nitab4.5_0000189g0250 Nicotiana tabacum HOM05D006979 ORTHO05D008857 4.4e-82 308.9 259 59.1
Oeu015481.1 Olea europaea HOM05D006979 ORTHO05D008857 4.4e-82 308.9 259 59.1
Sopen12g023760 Solanum pennellii HOM05D006979 ORTHO05D008857 5.7e-82 308.5 261 59.8
QL05p008051 Quercus lobata HOM05D006979 ORTHO05D008857 7.5e-82 308.1 365 48.5
SalBow7G2243 Salvia bowleyana HOM05D006979 ORTHO05D008857 7.5e-82 308.1 308 55.8
VMungo0331G0985 Vigna mungo HOM05D006979 ORTHO05D008857 9.7e-82 307.8 282 57.1
ECA234G1570 Erigeron canadensis HOM05D006979 ORTHO05D008857 8.3e-81 304.7 275 57.5
CDE05G0714 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 2.4e-80 303.1 264 58.0
Sc08g0005680 Simmondsia chinensis HOM05D006979 ORTHO05D008857 2.4e-80 303.1 297 54.2
CsaV3_7G034520 Cucumis sativus L. HOM05D006979 ORTHO05D008857 1.6e-79 300.4 284 55.6
Atru.chr1.3954 Acer truncatum HOM05D006979 ORTHO05D008857 2.0e-79 300.1 248 61.3
Os03g0410700 Oryza sativa ssp. japonica HOM05D006979 ORTHO05D008857 4.5e-79 298.9 257 59.5
Solyc12g049280.3 Solanum lycopersicum HOM05D006979 ORTHO05D008857 4.5e-79 298.9 244 60.7
PGR119G0938 Punica granatum HOM05D006979 ORTHO05D008857 1.3e-78 297.4 294 54.4
Hund05741 Selenicereus undatus HOM05D006979 ORTHO05D008857 5.0e-78 295.4 320 50.9
Lsat_1_v5_gn_5_135940 Lactuca sativa HOM05D006979 ORTHO05D008857 8.5e-78 294.7 308 54.2
Peaxi162Scf00177g00513 Petunia axillaris HOM05D006979 ORTHO05D008857 8.5e-78 294.7 268 56.0
Lj9A522T69 Lonicera japonica HOM05D006979 ORTHO05D008857 2.5e-77 293.1 254 58.7
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 3.6e-76 289.3 273 54.9
Aqoxy5G02291 Aquilegia oxysepala HOM05D006979 ORTHO05D008857 6.1e-76 288.5 299 51.5
ATR0598G212 Amborella trichopoda HOM05D006979 ORTHO05D008857 5.2e-75 285.4 256 57.0
MBI19_g11849_MAGBIO Magnolia biondii HOM05D006979 ORTHO05D008857 3.4e-74 282.7 268 54.9
ClCG09G000940 Citrullus lanatus HOM05D006979 ORTHO05D008857 4.4e-74 282.3 314 50.3
Gohir.A05G140600 Gossypium hirsutum HOM05D006979 ORTHO05D008857 9.1e-72 274.6 270 57.8
PSO210G5065 Papaver somniferum HOM05D006979 ORTHO05D008857 2.7e-71 273.1 321 49.2
PSO210G4684 Papaver somniferum HOM05D006979 ORTHO05D008857 7.7e-71 271.6 316 49.1
Cc04_g01400 Coffea canephora HOM05D006979 ORTHO05D008857 6.6e-70 268.5 245 55.5
Haze_16022 Corylus avellana HOM05D006979 ORTHO05D008857 1.0e-67 261.2 309 49.2
arahy.Tifrunner.gnm1.ann1.IV001U Arachis hypogaea HOM05D006979 ORTHO05D008857 3.4e-66 256.1 309 48.2
arahy.Tifrunner.gnm1.ann1.4E7AR5 Arachis hypogaea HOM05D006979 ORTHO05D008857 9.8e-66 254.6 309 47.9
Ca_05018_v3 Cicer arietinum L. HOM05D006979 ORTHO05D008857 1.2e-63 247.7 197 61.9
Pp3c11_2100 Physcomitrium patens HOM05D006979 ORTHO05D008857 5.0e-62 242.3 305 43.9
Psat4g183680 Pisum sativum HOM05D006979 ORTHO05D008857 1.5e-61 240.7 193 62.2
Zm00001eb019720 Zea mays HOM05D006979 ORTHO05D008857 2.9e-57 226.5 208 56.2
Nn6g35601 Nelumbo nucifera HOM05D006979 ORTHO05D008857 1.1e-56 224.6 275 45.1
Hma1.2p1_0496F.1_g166210 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 5.4e-56 222.2 170 64.7
EL10Ac7g16405 Beta vulgaris HOM05D006979 ORTHO05D008857 1.9e-53 213.8 320 41.6
Hma1.2p1_0496F.1_g166200 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 9.2e-48 194.9 212 51.9
AagrBONN_evm.TU.Sc2ySwM_362.1497 Anthoceros agrestis HOM05D006979 ORTHO05D008857 7.8e-47 191.8 202 51.5
MELO3C024358.2 Cucumis melo HOM05D006979 ORTHO05D008857 4.3e-45 186.0 164 60.4
FAN14G3231 Fragaria x ananassa HOM05D006979 ORTHO05D008857 4.3e-45 186.0 156 57.1
SMO117G0249 Selaginella moellendorffii HOM05D006979 ORTHO05D008857 1.5e-42 177.6 305 39.3
Ah.08g216750 Amaranthus hybridus HOM05D006979 ORTHO05D008857 2.0e-34 150.6 151 54.3
SEGI_25115 Sequoiadendron giganteum HOM05D006979 ORTHO05D008857 2.0e-34 150.6 124 60.5
Mapoly0030s0153 Marchantia polymorpha HOM05D006979 ORTHO05D008857 7.8e-31 138.7 147 54.4
CDE05G2075 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 1.2e-18 98.2 189 34.4
MCO12G160 Micromonas commoda HOM05D006979 ORTHO05D008857 4.5e-18 96.3 274 31.0
Cre02.g095133 Chlamydomonas reinhardtii HOM05D006979 ORTHO05D008857 1.1e-13 81.6 260 29.2
Medtr8g019490 Medicago truncatula HOM05D006979 ORTHO05D008857 1.6e-12 77.8 102 43.1
C02p30170 Brassica napus HOM05D006979 ORTHO05D033722 1.7e-09 67.8 52 69.2
BolC2t09067H Brassica oleracea HOM05D006979 ORTHO05D033722 1.7e-09 67.8 52 69.2
RcHm_v2.0_Chr6g0307231 Rosa chinensis HOM05D006979 ORTHO05D008857 1.7e-09 67.8 52 65.4
RcHm_v2.0_Chr3g0497381 Rosa chinensis HOM05D006979 ORTHO05D008857 1.9e-08 64.3 52 61.5
PRCOL_00001479 Prasinoderma coloniale HOM05D006979 ORTHO05D008857 2.5e-08 63.9 121 32.2
PSO339G6694 Papaver somniferum HOM05D006655 ORTHO05D007986 3.2e-08 63.5 252 26.2
SEGI_01007 Sequoiadendron giganteum HOM05D006655 ORTHO05D007986 1.2e-07 61.6 237 26.6
MD03G1169200 Malus domestica HOM05D006655 ORTHO05D007986 2.1e-07 60.8 256 26.2
Pp3c18_4890 Physcomitrium patens HOM05D006655 ORTHO05D007986 3.5e-07 60.1 231 26.4
AagrBONN_evm.TU.Sc2ySwM_228.2449 Anthoceros agrestis HOM05D006655 ORTHO05D007986 6.0e-07 59.3 234 25.2
Thhalv10025684m.g Eutrema salsugineum HOM05D006655 ORTHO05D007986 6.0e-07 59.3 229 25.3
Cc01_g05880 Coffea canephora HOM05D006655 ORTHO05D007986 7.9e-07 58.9 256 24.6
Lsat_1_v5_gn_1_77640 Lactuca sativa HOM05D006655 ORTHO05D007986 1.0e-06 58.5 229 24.9
AUR62027611 Chenopodium quinoa HOM05D005455 ORTHO05D007017 1.3e-06 58.2 205 28.8
FvH4_3g28150 Fragaria vesca HOM05D006655 ORTHO05D007986 1.8e-06 57.8 231 25.5
FAN11G1204 Fragaria x ananassa HOM05D006655 ORTHO05D007986 1.8e-06 57.8 231 25.5
arahy.Tifrunner.gnm1.ann1.760I9C Arachis hypogaea HOM05D006655 ORTHO05D007986 3.0e-06 57.0 231 25.5
Cfa009833 Carpinus fangiana HOM05D006655 ORTHO05D007986 3.0e-06 57.0 231 25.5
AUR62030234 Chenopodium quinoa HOM05D005455 ORTHO05D007017 5.1e-06 56.2 205 28.8
SMO347G0004 Selaginella moellendorffii HOM05D006655 ORTHO05D007986 5.1e-06 56.2 215 25.1
Aqoxy1G00312 Aquilegia oxysepala HOM05D006655 ORTHO05D007986 6.7e-06 55.8 231 25.5
vmacro03379 Vaccinium macrocarpon HOM05D005455 ORTHO05D007017 6.7e-06 55.8 210 29.0
DCAR_027944 Daucus carota HOM05D000361 ORTHO05D007313 8.7e-06 55.5 208 28.8
Hma1.2p1_0137F.1_g062520 Hydrangea macrophylla HOM05D005455 ORTHO05D007017 8.7e-06 55.5 209 28.2


User provided reference genes

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