Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g26990 Schrenkiella parvula HOM05D004678 ORTHO05D005880 6.8e-240 833.6 414 100.0
Carub.0002s1870 Capsella rubella HOM05D004678 ORTHO05D005880 5.1e-227 790.8 414 94.0
AT5G10330 Arabidopsis thaliana HOM05D004678 ORTHO05D005880 8.6e-227 790.0 418 93.3
Thhalv10007345m.g Eutrema salsugineum HOM05D004678 ORTHO05D005880 9.5e-226 786.6 414 92.8
AL2G31530 Arabidopsis lyrata HOM05D004678 ORTHO05D005880 2.8e-225 785.0 418 93.1
AT1G71920 Arabidopsis thaliana HOM05D004678 ORTHO05D005880 4.4e-223 777.7 418 92.3
BcaB03g14912 Brassica carinata HOM05D004678 ORTHO05D005880 7.8e-220 766.9 414 91.8
CARHR064740 Cardamine hirsuta HOM05D004678 ORTHO05D005880 6.8e-216 753.8 419 89.5
BcaC08g46628 Brassica carinata HOM05D004678 ORTHO05D005880 4.2e-213 744.6 410 90.0
BraA07t31374Z Brassica rapa HOM05D004678 ORTHO05D005880 7.1e-213 743.8 425 87.8
A07p38090 Brassica napus HOM05D004678 ORTHO05D005880 2.3e-211 738.8 419 88.1
C06p45990 Brassica napus HOM05D004678 ORTHO05D005880 3.9e-211 738.0 414 88.9
BolC6t39653H Brassica oleracea HOM05D004678 ORTHO05D005880 3.9e-211 738.0 414 88.9
Aa31LG4G8700 Aethionema arabicum HOM05D004678 ORTHO05D005880 1.9e-210 735.7 422 87.7
BcaC03g15310 Brassica carinata HOM05D004678 ORTHO05D005880 6.2e-209 730.7 415 88.9
THA.LOC104800109 Tarenaya hassleriana HOM05D004678 ORTHO05D005880 1.1e-208 729.9 417 86.6
BcaB05g24693 Brassica carinata HOM05D004678 ORTHO05D005880 1.2e-207 726.5 414 89.1
BraA02t06800Z Brassica rapa HOM05D004678 ORTHO05D005880 9.9e-207 723.4 415 88.2
A02p17560 Brassica napus HOM05D004678 ORTHO05D005880 2.9e-206 721.8 415 88.0
BolC2t08971H Brassica oleracea HOM05D004678 ORTHO05D005880 3.8e-206 721.5 428 86.2
C02p29210 Brassica napus HOM05D004678 ORTHO05D005880 2.5e-202 708.8 408 88.0
BcaC08g46629 Brassica carinata HOM05D004678 ORTHO05D005880 5.3e-200 701.0 363 94.8
BcaB05g24692 Brassica carinata HOM05D004678 ORTHO05D005880 4.2e-189 664.8 414 83.1
CANSAT21G1357 Cannabis sativa HOM05D004678 ORTHO05D005880 2.0e-183 646.0 420 74.5
Aqoxy6G00120 Aquilegia oxysepala HOM05D004678 ORTHO05D005880 1.0e-182 643.7 421 75.8
Ciclev10001274m.g Citrus clementina HOM05D004678 ORTHO05D005880 2.7e-180 635.6 371 82.2
Sc23g0001180 Simmondsia chinensis HOM05D004678 ORTHO05D005880 2.7e-180 635.6 369 82.4
QL02p033997 Quercus lobata HOM05D004678 ORTHO05D005880 3.5e-180 635.2 426 72.5
Prupe.6G194700 Prunus persica HOM05D004678 ORTHO05D005880 4.6e-180 634.8 414 74.6
CSS0026818 Camellia sinensis var. sinensis HOM05D004678 ORTHO05D005880 6.1e-180 634.4 417 75.3
Cfa018194 Carpinus fangiana HOM05D004678 ORTHO05D005880 6.1e-180 634.4 423 74.0
CiPaw.15G082000 Carya illinoinensis HOM05D004678 ORTHO05D005880 6.1e-180 634.4 367 82.6
COL.COLO4_19882 Corchorus olitorius HOM05D004678 ORTHO05D005880 6.1e-180 634.4 418 74.4
Actinidia04312 Actinidia chinensis HOM05D004678 ORTHO05D005880 7.9e-180 634.0 409 76.8
PGSC0003DMG400032541 Solanum tuberosum HOM05D004678 ORTHO05D005880 1.3e-179 633.3 415 75.2
AUR62023572 Chenopodium quinoa HOM05D004678 ORTHO05D005880 1.8e-179 632.9 426 73.9
ClCG09G010470 Citrullus lanatus HOM05D004678 ORTHO05D005880 2.3e-179 632.5 420 74.3
Lalb_Chr01g0010011 Lupinus albus HOM05D004678 ORTHO05D005880 2.3e-179 632.5 422 74.9
Duzib177G0967 Durio zibethinus HOM05D004678 ORTHO05D005880 3.0e-179 632.1 421 73.6
FvH4_7g02740 Fragaria vesca HOM05D004678 ORTHO05D005880 3.0e-179 632.1 414 74.6
FAN03G3192 Fragaria x ananassa HOM05D004678 ORTHO05D005880 3.9e-179 631.7 414 74.6
Solyc04g009350.3 Solanum lycopersicum HOM05D004678 ORTHO05D005880 3.9e-179 631.7 415 74.7
ClCG07G016110 Citrullus lanatus HOM05D004678 ORTHO05D005880 6.7e-179 630.9 420 74.0
FAN06G1846 Fragaria x ananassa HOM05D004678 ORTHO05D005880 6.7e-179 630.9 414 74.6
Sopen04g004470 Solanum pennellii HOM05D004678 ORTHO05D005880 6.7e-179 630.9 415 74.7
Hund27082 Selenicereus undatus HOM05D004678 ORTHO05D005880 1.1e-178 630.2 420 74.8
Cc02_g14680 Coffea canephora HOM05D004678 ORTHO05D005880 1.5e-178 629.8 432 73.6
CiPaw.16G062100 Carya illinoinensis HOM05D004678 ORTHO05D005880 1.9e-178 629.4 401 77.3
Eucgr.L00028 Eucalyptus grandis HOM05D004678 ORTHO05D005880 1.9e-178 629.4 363 83.2
FAN10G3317 Fragaria x ananassa HOM05D004678 ORTHO05D005880 1.9e-178 629.4 414 74.4
QL04p000013 Quercus lobata HOM05D004678 ORTHO05D005880 1.9e-178 629.4 427 73.1
MD12G1021300 Malus domestica HOM05D004678 ORTHO05D005880 2.5e-178 629.0 418 73.7
Nitab4.5_0002113g0110 Nicotiana tabacum HOM05D004678 ORTHO05D005880 3.3e-178 628.6 394 78.2
PGR142G3802 Punica granatum HOM05D004678 ORTHO05D005880 4.3e-178 628.2 382 79.3
Eucgr.G01597 Eucalyptus grandis HOM05D004678 ORTHO05D005880 5.7e-178 627.9 363 83.2
Hma1.2p1_0285F.1_g113940 Hydrangea macrophylla HOM05D004678 ORTHO05D005880 9.7e-178 627.1 410 76.1
MELO3C023659.2 Cucumis melo HOM05D004678 ORTHO05D005880 1.3e-177 626.7 401 76.3
Gohir.D09G114300 Gossypium hirsutum HOM05D004678 ORTHO05D005880 1.6e-177 626.3 419 73.0
Hma1.2p1_1487F.1_g286570 Hydrangea macrophylla HOM05D004678 ORTHO05D005880 1.6e-177 626.3 365 83.0
LjContig00222g0007085 Lotus japonicus HOM05D004678 ORTHO05D005880 2.2e-177 625.9 414 75.4
GSVIVG01034496001 Vitis vinifera HOM05D004678 ORTHO05D005880 2.2e-177 625.9 357 83.5
PSO017G6114 Papaver somniferum HOM05D004678 ORTHO05D005880 3.7e-177 625.2 367 80.4
PSO063G1958 Papaver somniferum HOM05D004678 ORTHO05D005880 3.7e-177 625.2 378 78.6
Thecc.08G181800 Theobroma cacao HOM05D004678 ORTHO05D005880 3.7e-177 625.2 373 80.7
TAR381G1101 Trochodendron aralioides HOM05D004678 ORTHO05D005880 4.8e-177 624.8 418 74.9
Migut.L01374 Erythranthe guttata HOM05D004678 ORTHO05D005880 6.3e-177 624.4 428 73.6
TWI34G1123 Tripterygium wilfordii HOM05D004678 ORTHO05D005880 6.3e-177 624.4 413 75.5
CsaV3_7G024070 Cucumis sativus L. HOM05D004678 ORTHO05D005880 8.2e-177 624.0 370 80.5
Ca_07561_v3 Cicer arietinum L. HOM05D004678 ORTHO05D005880 1.1e-176 623.6 419 74.0
Gohir.A09G117500 Gossypium hirsutum HOM05D004678 ORTHO05D005880 1.4e-176 623.2 419 72.8
Phvul.004G083900 Phaseolus vulgaris HOM05D004678 ORTHO05D005880 1.4e-176 623.2 421 73.2
Hund16801 Selenicereus undatus HOM05D004678 ORTHO05D005880 1.4e-176 623.2 367 80.4
Glyma.16G155800 Glycine max HOM05D004678 ORTHO05D005880 1.8e-176 622.9 422 73.7
Medtr6g033540 Medicago truncatula HOM05D004678 ORTHO05D005880 1.8e-176 622.9 412 73.8
MSTRG.13391 Avicennia marina HOM05D004678 ORTHO05D005880 4.1e-176 621.7 425 73.4
TPR.G36715 Trifolium pratense HOM05D004678 ORTHO05D005880 4.1e-176 621.7 414 74.6
TWI32G0349 Tripterygium wilfordii HOM05D004678 ORTHO05D005880 4.1e-176 621.7 360 82.5
QL04p003199 Quercus lobata HOM05D004678 ORTHO05D005880 5.3e-176 621.3 442 70.8
HanXRQChr14g0428861 Helianthus annuus HOM05D004678 ORTHO05D005880 9.0e-176 620.5 404 76.7
Peaxi162Scf00760g00021 Petunia axillaris HOM05D004678 ORTHO05D005880 9.0e-176 620.5 424 73.3
RcHm_v2.0_Chr1g0322001 Rosa chinensis HOM05D004678 ORTHO05D005880 1.2e-175 620.2 418 73.0
VMungo0464G0500 Vigna mungo HOM05D004678 ORTHO05D005880 2.0e-175 619.4 421 72.9
Manes.02G191200 Manihot esculenta HOM05D004678 ORTHO05D005880 4.5e-175 618.2 421 73.4
Lsat_1_v5_gn_9_80761 Lactuca sativa HOM05D004678 ORTHO05D005880 7.7e-175 617.5 416 73.3
ATR0152G001 Amborella trichopoda HOM05D004678 ORTHO05D005880 2.2e-174 615.9 368 80.7
Oeu044536.1 Olea europaea HOM05D004678 ORTHO05D005880 3.8e-174 615.1 366 80.9
SalBow2G0558 Salvia bowleyana HOM05D004678 ORTHO05D005880 5.0e-174 614.8 400 74.8
SalBow2G2825 Salvia bowleyana HOM05D004678 ORTHO05D005880 5.0e-174 614.8 400 74.8
Cpa.g.sc36.40 Carica papaya HOM05D004678 ORTHO05D005880 6.5e-174 614.4 362 82.6
Lj3A851T66 Lonicera japonica HOM05D004678 ORTHO05D005880 8.5e-174 614.0 429 72.7
DCAR_026915 Daucus carota HOM05D004678 ORTHO05D005880 1.1e-173 613.6 421 73.2
Nitab4.5_0007261g0010 Nicotiana tabacum HOM05D004678 ORTHO05D005880 1.1e-173 613.6 454 69.4
SGA_v2.0_scaffold8G04287 Striga asiatica HOM05D004678 ORTHO05D005880 4.2e-173 611.7 409 73.8
ECA236G1055 Erigeron canadensis HOM05D004678 ORTHO05D005880 5.5e-173 611.3 407 75.2
Potri.013G113900 Populus trichocarpa HOM05D004678 ORTHO05D005880 5.5e-173 611.3 368 80.7
EL10Ac1g00076 Beta vulgaris HOM05D004678 ORTHO05D005880 9.4e-173 610.5 388 75.8
HanXRQChr06g0184941 Helianthus annuus HOM05D004678 ORTHO05D005880 1.6e-172 609.8 397 75.3
CAN.G624.22 Capsicum annuum HOM05D004678 ORTHO05D005880 2.7e-172 609.0 400 76.0
Zm00001eb252330 Zea mays HOM05D004678 ORTHO05D005880 7.9e-172 607.4 398 74.1
Atru.chr13.1797 Acer truncatum HOM05D004678 ORTHO05D005880 3.9e-171 605.1 374 78.1
Os02g0709200 Oryza sativa ssp. japonica HOM05D004678 ORTHO05D005880 8.8e-171 604.0 365 79.2
unitig_699.g19496 Utricularia gibba HOM05D004678 ORTHO05D005880 1.7e-169 599.7 371 77.1
Sabra13G0096400 Salix brachista HOM05D004678 ORTHO05D005880 1.1e-168 597.0 372 78.0
CDE04G3296 Ceratophyllum demersum HOM05D004678 ORTHO05D005880 3.8e-166 588.6 365 77.8
arahy.Tifrunner.gnm1.ann1.57RIKC Arachis hypogaea HOM05D004678 ORTHO05D005880 5.0e-166 588.2 424 70.0
Rhsim09G0073000 Rhododendron simsii HOM05D004678 ORTHO05D005880 2.1e-164 582.8 445 68.3
Ah.05g178040 Amaranthus hybridus HOM05D004678 ORTHO05D005880 2.3e-163 579.3 460 65.7
AUR62004653 Chenopodium quinoa HOM05D004678 ORTHO05D005880 2.3e-163 579.3 418 70.1
arahy.Tifrunner.gnm1.ann1.7PLX29 Arachis hypogaea HOM05D004678 ORTHO05D005880 3.0e-163 578.9 422 69.2
Gorai.006G132200 Gossypium raimondii HOM05D004678 ORTHO05D005880 5.0e-158 561.6 378 73.3
Dinv30099 Davidia involucrata HOM05D004678 ORTHO05D005880 8.8e-155 550.8 327 82.9
Mapoly0007s0122 Marchantia polymorpha HOM05D004678 ORTHO05D005880 1.8e-152 543.1 369 71.5
Pp3c19_9420 Physcomitrium patens HOM05D004678 ORTHO05D005880 3.2e-149 532.3 373 68.6
HPP92_016059 Vanilla planifolia HOM05D004678 ORTHO05D005880 2.0e-146 523.1 327 76.8
SMO343G0150 Selaginella moellendorffii HOM05D004678 ORTHO05D005880 3.4e-146 522.3 362 68.2
Cre16.g672385 Chlamydomonas reinhardtii HOM05D004678 ORTHO05D005880 2.6e-138 496.1 357 66.7
Nn6g34909 Nelumbo nucifera HOM05D004678 ORTHO05D005880 4.4e-138 495.4 414 62.3
Haze_17921 Corylus avellana HOM05D004678 ORTHO05D005880 2.7e-135 486.1 494 54.3
Sed0015109 Sechium edule HOM05D004678 ORTHO05D005880 8.6e-134 481.1 309 76.1
Sopen11g017200 Solanum pennellii HOM05D004678 ORTHO05D005880 1.6e-132 476.9 313 74.4
PRCOL_00004069 Prasinoderma coloniale HOM05D004678 ORTHO05D005880 9.8e-130 467.6 343 64.7
MD14G1018500 Malus domestica HOM05D004678 ORTHO05D005880 1.7e-126 456.8 415 58.3
MCO01G265 Micromonas commoda HOM05D004678 ORTHO05D005880 4.9e-121 438.7 362 59.9
Medtr6g033600 Medicago truncatula HOM05D004678 ORTHO05D005880 1.7e-113 413.7 252 78.6
TAR629G2521 Trochodendron aralioides HOM05D004678 ORTHO05D005880 3.0e-110 402.9 306 67.3
Psat1g098720 Pisum sativum HOM05D004678 ORTHO05D005880 1.5e-109 400.6 341 63.0
Ca_29915_v3 Cicer arietinum L. HOM05D004678 ORTHO05D005880 2.9e-105 386.3 251 76.1
AagrBONN_evm.TU.Sc2ySwM_362.1592 Anthoceros agrestis HOM05D004678 ORTHO05D005880 2.1e-103 380.2 259 69.5
HPP92_016095 Vanilla planifolia HOM05D004678 ORTHO05D005880 7.3e-93 345.1 369 50.9
CDE07G1916 Ceratophyllum demersum HOM05D004678 ORTHO05D005880 3.6e-92 342.8 258 67.4
Nitab4.5_0003152g0020 Nicotiana tabacum HOM05D004678 ORTHO05D005880 4.0e-83 312.8 384 47.4
Cfa005301 Carpinus fangiana HOM05D004678 ORTHO05D005880 1.7e-81 307.4 178 81.5
Cfa009297 Carpinus fangiana HOM05D004678 ORTHO05D005880 6.0e-79 298.9 179 79.9
GSVIVG01025260001 Vitis vinifera HOM05D004678 ORTHO05D005880 2.9e-73 280.0 170 80.0
Prupe.8G056800 Prunus persica HOM05D004678 ORTHO05D005880 5.7e-69 265.8 188 70.7
MBI17_g38771_MAGBIO Magnolia biondii HOM05D004678 ORTHO05D005880 9.1e-59 231.9 143 76.9
MBI17_g42088_MAGBIO Magnolia biondii HOM05D004678 ORTHO05D005880 9.1e-59 231.9 143 76.9
CBR_g40358 Chara braunii HOM05D000019 ORTHO05D000048 5.7e-53 212.6 150 65.3
DCAR_023441 Daucus carota HOM05D004678 ORTHO05D005880 2.2e-52 210.7 154 69.5
GSVIVG01025261001 Vitis vinifera HOM05D004678 ORTHO05D005880 2.8e-52 210.3 124 76.6
SMO367G0035 Selaginella moellendorffii HOM05D004678 ORTHO05D005880 3.6e-47 193.4 128 70.3
Solyc11g040030.3 Solanum lycopersicum HOM05D004678 ORTHO05D005880 6.3e-44 182.6 171 58.5
SHI09056 Sapria himalayana HOM05D004678 ORTHO05D005880 3.7e-36 156.8 106 72.6
Cfa024628 Carpinus fangiana HOM05D004678 ORTHO05D005880 1.1e-35 155.2 372 30.6
SMO035G0001 Selaginella moellendorffii HOM05D004678 ORTHO05D005880 3.8e-33 146.7 186 50.5
SHI09055 Sapria himalayana HOM05D004678 ORTHO05D005880 5.0e-33 146.4 90 73.3
PGSC0003DMG400008416 Solanum tuberosum HOM05D004678 ORTHO05D005880 1.2e-29 135.2 135 54.1
Psat0s2699g0120 Pisum sativum HOM05D004678 ORTHO05D005880 2.7e-26 124.0 77 76.6
SMO343G0161 Selaginella moellendorffii HOM05D004678 ORTHO05D005880 4.5e-26 123.2 121 51.2
CAN.G137.23 Capsicum annuum HOM05D004678 ORTHO05D000493 1.1e-24 118.6 168 41.7
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 1.1e-24 118.6 127 51.2
CDE07G1051 Ceratophyllum demersum HOM05D004678 ORTHO05D043902 5.9e-18 96.3 71 69.0
Psat0s2699g0200 Pisum sativum HOM05D004678 ORTHO05D043902 2.3e-14 84.3 50 82.0
Pp3s32_480 Physcomitrium patens HOM05D003605 ORTHO05D309393 2.0e-13 81.3 277 27.1
PRCOL_00006728 Prasinoderma coloniale HOM05D004678 ORTHO05D333305 7.5e-13 79.3 402 24.9
Haze_27183 Corylus avellana HOM05D003605 ORTHO05D004292 3.7e-12 77.0 372 24.2
Pp3c20_8270 Physcomitrium patens HOM05D004697 ORTHO05D006015 1.8e-11 74.7 299 26.1
Ca_29349_v3 Cicer arietinum L. HOM05D002023 ORTHO05D044259 1.2e-10 72.0 305 25.9
Mapoly0192s0009 Marchantia polymorpha HOM05D004697 ORTHO05D006015 2.0e-10 71.2 370 23.5
Lj1A20T48 Lonicera japonica HOM05D002771 ORTHO05D003078 4.6e-10 70.1 259 25.1
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 7.8e-10 69.3 247 25.1
Eucgr.F04444 Eucalyptus grandis HOM05D002771 ORTHO05D003078 1.0e-09 68.9 326 24.8
Eucgr.F04446 Eucalyptus grandis HOM05D002771 ORTHO05D003078 1.0e-09 68.9 326 24.8
COL.COLO4_19765 Corchorus olitorius HOM05D004678 ORTHO05D005880 1.3e-09 68.6 36 77.8
MSTRG.4725 Avicennia marina HOM05D004697 ORTHO05D006015 3.0e-09 67.4 237 25.7
Lsat_1_v5_gn_7_11140 Lactuca sativa HOM05D002771 ORTHO05D003078 3.9e-09 67.0 256 27.3
Zm00001eb122460 Zea mays HOM05D004697 ORTHO05D006015 3.9e-09 67.0 379 23.2
Ciclev10025775m.g Citrus clementina HOM05D004697 ORTHO05D006015 6.6e-09 66.2 290 24.5
DCAR_012361 Daucus carota HOM05D002771 ORTHO05D003078 6.6e-09 66.2 233 25.8
Ah.01g021080 Amaranthus hybridus HOM05D004697 ORTHO05D006015 8.6e-09 65.9 289 23.2
arahy.Tifrunner.gnm1.ann1.HZ04KR Arachis hypogaea HOM05D000658 ORTHO05D000826 1.5e-08 65.1 234 27.8
CBR_g36553 Chara braunii HOM05D003605 ORTHO05D003078 4.3e-08 63.5 165 27.9
Cpa.g.sc36.33 Carica papaya HOM05D002771 ORTHO05D003078 5.6e-08 63.2 245 22.4
Lalb_Chr21g0309431 Lupinus albus HOM05D002771 ORTHO05D003078 5.6e-08 63.2 260 26.2
AUR62011602 Chenopodium quinoa HOM05D004697 ORTHO05D006015 9.5e-08 62.4 295 24.1
Mapoly0162s0009 Marchantia polymorpha HOM05D002771 ORTHO05D003078 9.5e-08 62.4 231 21.6
SMO196G0040 Selaginella moellendorffii HOM05D004697 ORTHO05D006015 3.6e-07 60.5 288 22.9
CDE01G0614 Ceratophyllum demersum HOM05D004697 ORTHO05D006015 4.7e-07 60.1 306 22.9
Lsat_1_v5_gn_4_104321 Lactuca sativa HOM05D004697 ORTHO05D006015 1.1e-06 58.9 236 25.4
ECA236G0232 Erigeron canadensis HOM05D002771 ORTHO05D003078 5.2e-06 56.6 264 24.6
Sed0005010 Sechium edule HOM05D002771 ORTHO05D003078 5.2e-06 56.6 168 25.6


User provided reference genes

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