Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 5.1e-145 517.7 257 100.0
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 5.1e-145 517.7 257 100.0
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 7.4e-144 513.8 257 99.2
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 1.8e-142 509.2 257 98.1
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 1.8e-142 509.2 257 98.1
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 1.8e-142 509.2 257 98.1
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 1.8e-142 509.2 257 98.1
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 1.8e-142 509.2 257 98.1
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 1.1e-139 500.0 257 96.5
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 1.1e-139 500.0 257 96.5
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 2.5e-139 498.8 257 96.5
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 1.6e-138 496.1 257 95.7
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 5.3e-134 481.1 257 92.2
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 4.7e-130 468.0 257 87.2
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 2.8e-127 458.8 257 87.2
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 2.8e-127 458.8 257 86.0
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 1.4e-126 456.4 257 85.6
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 1.4e-126 456.4 257 85.6
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 2.9e-124 448.7 257 84.0
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 3.8e-124 448.4 257 83.3
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 1.5e-123 446.4 257 83.7
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 1.5e-123 446.4 254 86.2
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 1.9e-123 446.0 256 84.4
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 4.2e-123 444.9 257 82.9
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 5.5e-123 444.5 256 82.4
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 7.2e-123 444.1 257 82.9
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 3.6e-122 441.8 257 83.7
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 8.0e-122 440.7 254 85.0
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 1.0e-121 440.3 256 82.8
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 1.4e-121 439.9 257 82.5
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 4.0e-121 438.3 257 80.9
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 5.2e-121 438.0 256 82.4
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 5.2e-121 438.0 258 83.3
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 6.7e-121 437.6 257 81.3
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 8.8e-121 437.2 257 82.9
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 8.8e-121 437.2 257 82.9
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 8.8e-121 437.2 257 82.9
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 8.8e-121 437.2 257 82.1
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 1.2e-120 436.8 257 82.1
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 1.2e-120 436.8 257 82.1
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 1.2e-120 436.8 256 83.6
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 1.5e-120 436.4 257 83.7
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 2.6e-120 435.6 257 80.9
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 2.6e-120 435.6 256 83.2
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 5.7e-120 434.5 257 84.0
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 5.7e-120 434.5 257 84.0
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 9.7e-120 433.7 255 83.9
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 9.7e-120 433.7 257 82.5
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 1.3e-119 433.3 257 80.2
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 1.3e-119 433.3 256 80.5
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 1.3e-119 433.3 256 80.5
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 2.2e-119 432.6 257 80.5
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 2.2e-119 432.6 302 72.2
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 3.7e-119 431.8 257 81.3
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 3.7e-119 431.8 265 80.8
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 3.7e-119 431.8 257 80.9
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 4.8e-119 431.4 254 81.1
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 8.2e-119 430.6 255 82.0
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 8.2e-119 430.6 257 81.7
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 1.1e-118 430.3 257 82.9
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 1.1e-118 430.3 257 82.1
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 1.8e-118 429.5 257 80.2
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 1.8e-118 429.5 257 82.5
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 2.4e-118 429.1 255 80.4
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 7.0e-118 427.6 257 80.9
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 7.0e-118 427.6 258 81.0
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 9.1e-118 427.2 257 79.8
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 3.5e-117 425.2 257 81.3
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 3.5e-117 425.2 257 81.3
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 3.5e-117 425.2 257 81.3
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 5.9e-117 424.5 257 79.8
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 5.9e-117 424.5 257 80.5
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 5.9e-117 424.5 257 80.5
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.0e-116 423.7 257 79.8
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 1.7e-116 422.9 257 79.0
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 3.8e-116 421.8 257 79.4
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 3.8e-116 421.8 257 79.4
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 3.8e-116 421.8 257 80.9
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 3.8e-116 421.8 255 79.2
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 6.5e-116 421.0 271 76.4
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 8.5e-116 420.6 257 79.4
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 2.5e-115 419.1 257 78.2
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 2.5e-115 419.1 257 80.2
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 3.2e-115 418.7 271 75.6
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 3.6e-114 415.2 263 76.8
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 1.2e-112 410.2 257 77.4
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 2.2e-111 406.0 255 74.9
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 6.3e-111 404.4 252 77.4
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 5.4e-110 401.4 255 75.3
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 1.7e-108 396.4 257 78.6
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 5.0e-108 394.8 254 75.2
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 5.0e-108 394.8 257 74.3
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 1.5e-107 393.3 255 74.5
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 1.2e-106 390.2 230 82.2
vmacro21201 Vaccinium macrocarpon HOM05D005529 ORTHO05D006800 1.4e-105 386.7 417 52.0
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 8.8e-105 384.0 250 74.0
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 1.0e-100 370.5 257 73.5
TAR381G0607 Trochodendron aralioides HOM05D005529 ORTHO05D006800 1.3e-100 370.2 281 68.7
Nitab4.5_0004295g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 8.6e-100 367.5 223 80.3
Hma1.2p1_0358F.1_g134920 Hydrangea macrophylla HOM05D005529 ORTHO05D006800 1.4e-97 360.1 214 79.4
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 8.9e-97 357.5 231 74.0
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 1.4e-94 350.1 255 69.8
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 3.6e-90 335.5 255 65.1
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 6.2e-90 334.7 251 64.5
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 1.5e-88 330.1 247 64.8
SMO141G0273 Selaginella moellendorffii HOM05D005529 ORTHO05D006800 1.7e-87 326.6 250 65.2
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 6.4e-87 324.7 198 79.8
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 8.6e-84 314.3 251 62.9
CARHR290990 Cardamine hirsuta HOM05D005529 ORTHO05D006800 2.1e-82 309.7 153 97.4
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 1.8e-81 306.6 198 74.7
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 1.9e-70 270.0 159 84.3
Zm00001eb018520 Zea mays HOM05D005529 ORTHO05D006800 1.2e-69 267.3 170 73.5
Ca_10643_v3 Cicer arietinum L. HOM05D005529 ORTHO05D006800 9.9e-64 247.7 142 81.7
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 6.0e-61 238.4 132 86.4
PRCOL_00004850 Prasinoderma coloniale HOM05D005529 ORTHO05D006800 2.5e-59 233.0 254 48.8
Haze_27340 Corylus avellana HOM05D005529 ORTHO05D006800 1.8e-57 226.9 247 45.7
Glyma.06G212500 Glycine max HOM05D005529 ORTHO05D006800 7.1e-54 214.9 130 79.2
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 3.3e-51 206.1 105 99.0
CSS0032133 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.1e-49 201.1 119 79.0
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 9.0e-49 198.0 198 57.1
Lsat_1_v5_gn_8_71180 Lactuca sativa HOM05D005529 ORTHO05D006800 5.8e-48 195.3 156 62.2
Glyma.09G074800 Glycine max HOM05D005529 ORTHO05D006800 4.9e-47 192.2 114 80.7
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 3.2e-46 189.5 112 83.0
Cfa022509 Carpinus fangiana HOM05D005529 ORTHO05D006800 1.6e-45 187.2 267 37.8
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 1.5e-43 180.6 105 83.8
AUR62022308 Chenopodium quinoa HOM05D005529 ORTHO05D006800 6.2e-42 175.3 257 42.8
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 1.4e-41 174.1 105 81.9
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.4e-38 164.1 105 76.2
Glyma.04G140500 Glycine max HOM05D005529 ORTHO05D006800 2.5e-38 163.3 104 76.9
Lsat_1_v5_gn_3_73520 Lactuca sativa HOM05D005529 ORTHO05D006800 6.9e-33 145.2 91 70.3
Actinidia17753 Actinidia chinensis HOM05D005529 ORTHO05D006800 3.2e-30 136.3 116 59.5
HPP92_020744 Vanilla planifolia HOM05D005529 ORTHO05D006800 5.9e-24 115.5 102 57.8
HPP92_020745 Vanilla planifolia HOM05D005529 ORTHO05D006800 9.4e-22 108.2 95 58.9
SalBow7G1408 Salvia bowleyana HOM05D005529 ORTHO05D006800 2.7e-21 106.7 67 80.6
MD10G1041000 Malus domestica HOM05D005529 ORTHO05D006800 5.1e-20 102.4 60 78.3
HPP92_020839 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.3e-15 87.8 55 76.4
Glyma.16G101900 Glycine max HOM05D005529 ORTHO05D006800 1.8e-09 67.4 58 63.8
VMungo0464G1177 Vigna mungo HOM05D005529 ORTHO05D006800 4.2e-06 56.2 46 63.0


User provided reference genes

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