Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 3.6e-89 331.6 180 100.0
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 1.0e-62 243.8 184 80.4
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 1.0e-62 243.8 180 80.0
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 6.5e-62 241.1 179 76.5
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 3.9e-59 231.9 181 78.5
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 3.7e-57 225.3 183 76.0
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 1.8e-56 223.0 180 73.3
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 1.8e-56 223.0 180 73.3
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 5.3e-56 221.5 180 73.9
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 5.3e-56 221.5 180 73.9
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 1.5e-55 219.9 180 73.3
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 2.3e-51 206.1 180 66.7
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 7.0e-40 167.9 180 59.4
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 2.0e-31 139.8 159 57.9
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 5.9e-31 138.3 181 53.6
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 2.3e-30 136.3 143 56.6
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 2.9e-30 136.0 181 51.9
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 6.5e-30 134.8 186 52.2
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 8.6e-30 134.4 180 51.7
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 1.1e-29 134.0 116 64.7
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 1.9e-29 133.3 164 54.9
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 1.9e-29 133.3 164 54.9
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 2.5e-29 132.9 164 54.3
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 3.2e-29 132.5 86 80.2
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 5.5e-29 131.7 182 52.2
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 5.5e-29 131.7 177 52.5
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 7.2e-29 131.3 182 53.3
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 7.2e-29 131.3 191 49.7
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 7.2e-29 131.3 143 55.9
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 9.5e-29 131.0 181 50.3
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 9.5e-29 131.0 93 77.4
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 1.2e-28 130.6 100 73.0
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 1.2e-28 130.6 86 79.1
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 1.2e-28 130.6 168 51.2
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 1.2e-28 130.6 181 49.7
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 1.6e-28 130.2 134 62.7
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 2.1e-28 129.8 183 52.5
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 2.8e-28 129.4 86 76.7
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 3.6e-28 129.0 184 48.9
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 8.0e-28 127.9 119 64.7
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 8.0e-28 127.9 143 55.2
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 1.0e-27 127.5 155 56.1
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 1.4e-27 127.1 125 63.2
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 1.4e-27 127.1 138 57.2
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 1.8e-27 126.7 186 50.0
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 2.3e-27 126.3 85 77.6
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 2.3e-27 126.3 86 79.1
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 2.3e-27 126.3 135 59.3
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 2.3e-27 126.3 142 54.2
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 3.0e-27 125.9 128 60.2
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 3.0e-27 125.9 86 74.4
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 3.0e-27 125.9 96 71.9
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 4.0e-27 125.6 140 57.1
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 4.0e-27 125.6 101 70.3
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 4.0e-27 125.6 135 60.0
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 4.0e-27 125.6 180 48.3
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 4.0e-27 125.6 184 52.7
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 5.2e-27 125.2 100 69.0
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 6.8e-27 124.8 148 54.1
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 6.8e-27 124.8 135 57.0
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 8.8e-27 124.4 86 75.6
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 8.8e-27 124.4 142 53.5
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.5e-26 123.6 153 54.2
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.5e-26 123.6 153 54.2
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 1.5e-26 123.6 184 46.7
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 2.0e-26 123.2 86 72.1
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 2.6e-26 122.9 86 74.4
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 4.4e-26 122.1 86 75.6
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 5.7e-26 121.7 86 75.6
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 5.7e-26 121.7 102 67.6
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 9.8e-26 120.9 154 54.5
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 9.8e-26 120.9 142 52.1
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 1.3e-25 120.6 89 71.9
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 1.3e-25 120.6 95 69.5
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 1.3e-25 120.6 103 64.1
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 1.7e-25 120.2 102 67.6
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 1.7e-25 120.2 175 49.1
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 2.2e-25 119.8 86 74.4
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 2.2e-25 119.8 142 52.1
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 2.8e-25 119.4 86 74.4
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.8e-25 119.4 86 74.4
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 2.8e-25 119.4 85 75.3
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 3.7e-25 119.0 93 71.0
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 4.9e-25 118.6 149 52.3
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 4.9e-25 118.6 86 74.4
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 4.9e-25 118.6 86 74.4
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 4.9e-25 118.6 94 70.2
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 8.3e-25 117.9 134 53.7
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.1e-24 117.5 86 73.3
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 1.1e-24 117.5 126 59.5
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 1.4e-24 117.1 186 46.8
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 1.4e-24 117.1 98 69.4
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.4e-24 117.1 86 70.9
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.4e-24 117.1 86 70.9
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 1.8e-24 116.7 175 48.0
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 3.1e-24 115.9 184 46.2
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 3.1e-24 115.9 106 61.3
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 5.4e-24 115.2 85 68.2
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 7.0e-24 114.8 150 51.3
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 1.2e-23 114.0 138 55.1
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 2.0e-23 113.2 138 55.1
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 1.1e-21 107.5 125 58.4
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.3e-21 105.9 139 48.9
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 3.3e-21 105.9 76 71.1
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 4.3e-21 105.5 85 61.2
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 7.3e-21 104.8 150 44.7
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 3.6e-20 102.4 176 42.6
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 4.7e-20 102.1 83 63.9
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 1.8e-19 100.1 102 57.8
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 1.7e-17 93.6 89 58.4
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 2.9e-17 92.8 65 73.8
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 7.8e-15 84.7 89 53.9
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.0e-14 82.8 86 54.7
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 5.0e-14 82.0 86 53.5
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 6.2e-12 75.1 178 34.3
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 2.0e-10 70.1 94 45.7
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 8.3e-09 64.7 49 65.3


User provided reference genes

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