Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 2.6e-161 572.0 288 100.0
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 1.4e-151 539.7 289 94.8
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 8.9e-146 520.4 289 91.3
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 8.9e-146 520.4 289 91.7
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 3.7e-144 515.0 290 90.7
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 1.1e-143 513.5 291 89.7
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 2.4e-143 512.3 291 91.1
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 2.4e-143 512.3 291 91.1
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 7.8e-142 507.3 297 88.9
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 7.8e-142 507.3 297 88.9
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 2.7e-134 482.3 295 84.1
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 3.9e-109 398.7 285 74.0
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 1.5e-108 396.7 291 72.9
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 1.1e-106 390.6 293 70.3
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.4e-106 390.2 289 70.2
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 9.0e-106 387.5 259 74.5
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 3.4e-105 385.6 283 72.1
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 4.4e-105 385.2 293 68.9
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 3.8e-104 382.1 231 82.7
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.4e-103 380.2 298 67.8
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 1.9e-103 379.8 289 70.6
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.9e-103 379.8 293 70.0
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 2.4e-103 379.4 235 79.6
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 3.2e-103 379.0 231 81.0
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 3.2e-103 379.0 294 69.7
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 7.1e-103 377.9 225 81.3
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 2.7e-102 375.9 231 81.4
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 2.7e-102 375.9 291 68.7
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 2.7e-102 375.9 225 80.4
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 2.7e-102 375.9 234 79.1
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 3.5e-102 375.6 227 82.8
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 6.0e-102 374.8 227 79.7
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 6.0e-102 374.8 227 80.2
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 6.0e-102 374.8 237 78.5
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 6.0e-102 374.8 237 78.5
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 7.9e-102 374.4 233 78.1
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 7.9e-102 374.4 303 67.0
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 7.9e-102 374.4 243 77.0
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 7.9e-102 374.4 227 82.4
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 7.9e-102 374.4 227 82.4
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 1.0e-101 374.0 289 68.5
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.0e-101 374.0 232 81.0
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.0e-101 374.0 232 81.0
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 1.3e-101 373.6 277 72.2
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 1.7e-101 373.2 250 74.4
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 2.3e-101 372.9 235 77.9
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 2.3e-101 372.9 229 79.0
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 2.3e-101 372.9 226 81.4
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 3.9e-101 372.1 270 70.7
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 5.1e-101 371.7 229 78.2
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 8.7e-101 370.9 227 80.6
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 1.1e-100 370.5 278 69.4
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 1.1e-100 370.5 233 80.7
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 1.5e-100 370.2 293 68.3
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 1.9e-100 369.8 227 81.1
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 1.9e-100 369.8 260 73.5
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 3.3e-100 369.0 293 67.2
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 5.6e-100 368.2 291 68.0
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 9.6e-100 367.5 249 73.5
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 9.6e-100 367.5 232 78.9
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 1.6e-99 366.7 247 75.7
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 2.1e-99 366.3 315 63.2
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 4.8e-99 365.2 231 78.4
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 8.1e-99 364.4 289 66.4
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 8.1e-99 364.4 225 79.1
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 1.8e-98 363.2 232 77.6
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 2.4e-98 362.8 290 65.5
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 5.3e-98 361.7 248 73.8
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 6.9e-98 361.3 291 66.0
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 9.0e-98 360.9 242 73.6
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 9.0e-98 360.9 288 66.7
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 1.2e-97 360.5 327 63.0
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 1.5e-97 360.1 275 69.8
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 2.0e-97 359.8 246 73.6
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 2.0e-97 359.8 249 73.5
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 7.6e-97 357.8 245 70.6
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 2.2e-96 356.3 231 75.3
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 4.9e-96 355.1 228 76.8
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 6.4e-96 354.8 231 78.8
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 8.4e-96 354.4 236 73.7
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 1.1e-95 354.0 304 62.8
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 3.2e-95 352.4 209 81.8
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 4.2e-95 352.1 288 66.0
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 4.2e-95 352.1 211 81.0
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 7.1e-95 351.3 298 65.4
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 2.7e-94 349.4 229 76.0
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 4.6e-94 348.6 247 71.3
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.3e-93 347.1 290 63.4
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 2.3e-93 346.3 299 62.5
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 8.7e-93 344.4 262 67.9
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 1.5e-92 343.6 235 72.3
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.9e-92 343.2 299 61.9
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 2.5e-92 342.8 299 61.9
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 4.3e-92 342.0 300 60.0
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 7.4e-92 341.3 309 60.5
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 2.2e-88 329.7 234 70.9
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 8.4e-88 327.8 227 70.5
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 2.1e-83 313.2 232 66.8
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 2.1e-78 296.6 191 78.0
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 2.7e-78 296.2 226 67.3
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 4.3e-76 288.9 229 62.0
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 1.4e-74 283.9 243 58.4
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 2.9e-72 276.2 209 69.4
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 5.0e-72 275.4 242 61.6
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 1.9e-71 273.5 202 62.9
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 1.2e-65 254.2 226 60.2
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 5.9e-65 251.9 212 60.8
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 2.2e-64 250.0 230 61.7
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 4.0e-37 159.5 170 53.5
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 4.0e-37 159.5 239 43.1
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 3.1e-34 149.8 273 36.3
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 7.8e-33 145.2 177 45.2
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.2e-30 137.9 93 75.3
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 3.6e-30 136.3 94 74.5
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 4.7e-30 136.0 156 43.6
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 2.2e-27 127.1 86 73.3
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 1.5e-23 114.4 131 45.8
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 2.3e-08 63.9 118 38.1
Cre02.g093650 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D044287 4.7e-06 56.2 129 31.0


User provided reference genes

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