Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g25940 Schrenkiella parvula HOM05D007477 ORTHO05D009428 2.5e-107 392.1 194 100.0
BcaC08g46513 Brassica carinata HOM05D007477 ORTHO05D009428 2.8e-95 352.1 195 90.3
C06p44830 Brassica napus HOM05D007477 ORTHO05D009428 9.0e-94 347.1 196 89.3
BraA07t31278Z Brassica rapa HOM05D007477 ORTHO05D009428 1.2e-93 346.7 196 88.8
BcaC03g15231 Brassica carinata HOM05D007477 ORTHO05D009428 2.6e-93 345.5 194 89.7
C02p28170 Brassica napus HOM05D007477 ORTHO05D009428 2.6e-93 345.5 194 89.7
BolC2t08861H Brassica oleracea HOM05D007477 ORTHO05D009428 2.6e-93 345.5 194 89.7
A07p37160 Brassica napus HOM05D007477 ORTHO05D009428 5.9e-93 344.4 196 88.3
BolC6t39542H Brassica oleracea HOM05D007477 ORTHO05D009428 7.7e-93 344.0 196 88.8
BraA02t06739Z Brassica rapa HOM05D007477 ORTHO05D009428 7.7e-93 344.0 194 89.7
BcaB05g24610 Brassica carinata HOM05D007477 ORTHO05D009428 8.5e-92 340.5 193 87.6
A02p16850 Brassica napus HOM05D007477 ORTHO05D009428 8.5e-92 340.5 194 89.2
Thhalv10019160m.g Eutrema salsugineum HOM05D007477 ORTHO05D009428 1.1e-91 340.1 200 88.0
CARHR064020 Cardamine hirsuta HOM05D007477 ORTHO05D009428 1.7e-84 316.2 193 82.9
Carub.0002s1750 Capsella rubella HOM05D007477 ORTHO05D009428 5.0e-84 314.7 192 83.3
AL2G30200 Arabidopsis lyrata HOM05D007477 ORTHO05D009428 3.2e-83 312.0 192 81.8
AT1G70760 Arabidopsis thaliana HOM05D007477 ORTHO05D009428 1.0e-81 307.0 192 81.8
Aa31LG4G10230 Aethionema arabicum HOM05D007477 ORTHO05D009428 3.5e-69 265.4 193 68.4
THA.LOC104823000 Tarenaya hassleriana HOM05D007477 ORTHO05D009428 8.3e-63 244.2 189 61.4
Thecc.02G287400 Theobroma cacao HOM05D007477 ORTHO05D009428 4.0e-57 225.3 164 65.9
Duzib251G0266 Durio zibethinus HOM05D007477 ORTHO05D009428 1.5e-56 223.4 184 61.4
Cpa.g.sc1084.2 Carica papaya HOM05D007477 ORTHO05D009428 2.8e-55 219.2 187 59.9
Gohir.D02G141700 Gossypium hirsutum HOM05D007477 ORTHO05D009428 1.4e-54 216.9 196 59.2
Lalb_Chr07g0187731 Lupinus albus HOM05D007477 ORTHO05D009428 5.4e-54 214.9 185 57.3
Gohir.A03G118700 Gossypium hirsutum HOM05D007477 ORTHO05D009428 2.0e-53 213.0 195 58.5
Manes.15G131100 Manihot esculenta HOM05D007477 ORTHO05D009428 1.7e-52 209.9 172 60.5
Prupe.1G330000 Prunus persica HOM05D007477 ORTHO05D009428 2.3e-52 209.5 187 56.7
Dinv28044 Davidia involucrata HOM05D007477 ORTHO05D009428 6.6e-52 208.0 188 54.3
QL03p033890 Quercus lobata HOM05D007477 ORTHO05D009428 1.9e-51 206.5 179 58.7
GSVIVG01011707001 Vitis vinifera HOM05D007477 ORTHO05D009428 2.5e-51 206.1 166 57.2
Lj4g0016169 Lotus japonicus HOM05D007477 ORTHO05D009428 3.3e-51 205.7 184 57.6
Ciclev10016822m.g Citrus clementina HOM05D007477 ORTHO05D009428 9.5e-51 204.1 194 56.7
Cfa014979 Carpinus fangiana HOM05D007477 ORTHO05D009428 1.6e-50 203.4 130 68.5
CANSAT01G0728 Cannabis sativa HOM05D007477 ORTHO05D009428 2.8e-50 202.6 182 55.5
MELO3C005297.2 Cucumis melo HOM05D007477 ORTHO05D009428 1.4e-49 200.3 138 70.3
DCAR_023590 Daucus carota HOM05D007477 ORTHO05D009428 4.0e-49 198.7 192 56.8
RcHm_v2.0_Chr4g0443591 Rosa chinensis HOM05D007477 ORTHO05D009428 4.0e-49 198.7 192 53.6
CiPaw.06G048300 Carya illinoinensis HOM05D007477 ORTHO05D009428 5.2e-49 198.4 172 56.4
CsaV3_5G028340 Cucumis sativus L. HOM05D005212 ORTHO05D006353 5.2e-49 198.4 197 57.9
PGR004G1414 Punica granatum HOM05D007477 ORTHO05D009428 1.2e-48 197.2 142 65.5
Sed0009759 Sechium edule HOM05D007477 ORTHO05D009428 9.8e-48 194.1 191 55.0
TWI74G0372 Tripterygium wilfordii HOM05D007477 ORTHO05D009428 2.2e-47 193.0 162 56.8
Gorai.005G159500 Gossypium raimondii HOM05D007477 ORTHO05D009428 2.9e-47 192.6 194 54.1
Eucgr.G02161 Eucalyptus grandis HOM05D007477 ORTHO05D009428 1.8e-46 189.9 186 52.7
Actinidia12373 Actinidia chinensis HOM05D007477 ORTHO05D009428 5.4e-46 188.3 175 54.9
Atru.chr11.654 Acer truncatum HOM05D007477 ORTHO05D009428 7.0e-46 188.0 183 53.0
arahy.Tifrunner.gnm1.ann1.4G9RAC Arachis hypogaea HOM05D007477 ORTHO05D009428 1.6e-45 186.8 184 53.8
arahy.Tifrunner.gnm1.ann1.KUTA9A Arachis hypogaea HOM05D007477 ORTHO05D009428 1.6e-45 186.8 184 53.8
Potri.010G110400 Populus trichocarpa HOM05D007477 ORTHO05D009428 3.5e-45 185.7 192 52.6
Actinidia36649 Actinidia chinensis HOM05D007477 ORTHO05D009428 1.7e-44 183.3 179 52.0
ECA233G5235 Erigeron canadensis HOM05D007477 ORTHO05D009428 6.6e-44 181.4 181 54.1
AUR62014194 Chenopodium quinoa HOM05D007477 ORTHO05D009428 2.5e-43 179.5 145 57.9
HanXRQChr12g0363541 Helianthus annuus HOM05D007477 ORTHO05D009428 2.5e-43 179.5 174 52.3
Nn4g24250 Nelumbo nucifera HOM05D007477 ORTHO05D009428 4.3e-43 178.7 168 54.2
Psat7g082600 Pisum sativum HOM05D007477 ORTHO05D009428 4.3e-43 178.7 196 52.6
Lj3A866T67 Lonicera japonica HOM05D007477 ORTHO05D009428 9.5e-43 177.6 188 51.1
Nitab4.5_0002473g0010 Nicotiana tabacum HOM05D007477 ORTHO05D009428 1.2e-42 177.2 172 54.1
SalBow8G0293 Salvia bowleyana HOM05D007477 ORTHO05D009428 1.6e-42 176.8 126 65.1
Ca_11592_v3 Cicer arietinum L. HOM05D007477 ORTHO05D009428 2.1e-42 176.4 196 52.6
Solyc05g026550.3 Solanum lycopersicum HOM05D007477 ORTHO05D009428 2.1e-42 176.4 133 63.9
Nitab4.5_0003022g0050 Nicotiana tabacum HOM05D007477 ORTHO05D009428 3.6e-42 175.6 162 54.9
MSTRG.7617 Avicennia marina HOM05D007477 ORTHO05D009428 4.7e-42 175.3 197 49.2
FAN07G0335 Fragaria x ananassa HOM05D007477 ORTHO05D009428 6.2e-42 174.9 193 50.8
Lsat_1_v5_gn_8_44241 Lactuca sativa HOM05D007477 ORTHO05D009428 6.2e-42 174.9 140 60.0
Peaxi162Scf00376g00125 Petunia axillaris HOM05D007477 ORTHO05D009428 6.2e-42 174.9 193 49.7
Sopen05g023010 Solanum pennellii HOM05D007477 ORTHO05D002065 1.0e-41 174.1 133 63.2
PGSC0003DMG400015900 Solanum tuberosum HOM05D007477 ORTHO05D009428 1.0e-41 174.1 133 63.2
FAN17G0828 Fragaria x ananassa HOM05D007477 ORTHO05D009428 1.4e-41 173.7 193 50.3
Phvul.002G183200 Phaseolus vulgaris HOM05D007477 ORTHO05D009428 1.4e-41 173.7 188 51.6
unitig_26.g9564 Utricularia gibba HOM05D000544 ORTHO05D009428 1.8e-41 173.3 126 61.9
Glyma.05G139800 Glycine max HOM05D007477 ORTHO05D009428 4.0e-41 172.2 184 49.5
MBI12_g05373_MAGBIO Magnolia biondii HOM05D007477 ORTHO05D009428 8.9e-41 171.0 167 52.7
FvH4_4g34090 Fragaria vesca HOM05D007477 ORTHO05D009428 1.2e-40 170.6 193 49.7
FAN12G2365 Fragaria x ananassa HOM05D007477 ORTHO05D009428 1.5e-40 170.2 193 49.7
Cc11_g08270 Coffea canephora HOM05D007477 ORTHO05D009428 2.6e-40 169.5 134 59.7
VMungo0251G0485 Vigna mungo HOM05D007477 ORTHO05D009428 2.6e-40 169.5 181 51.4
Migut.L00398 Erythranthe guttata HOM05D007477 ORTHO05D009428 9.8e-40 167.5 188 51.1
PSO478G2137 Papaver somniferum HOM05D007477 ORTHO05D009428 4.9e-39 165.2 127 59.1
CAN.G439.27 Capsicum annuum HOM05D007477 ORTHO05D009428 2.4e-38 162.9 167 52.1
ClCG01G006330 Citrullus lanatus HOM05D007477 ORTHO05D009428 2.0e-37 159.8 194 47.4
Haze_10942 Corylus avellana HOM05D007477 ORTHO05D009428 1.7e-36 156.8 130 56.2
CDE05G1013 Ceratophyllum demersum HOM05D007477 ORTHO05D009428 1.1e-35 154.1 171 50.9
Rhsim09G0093900 Rhododendron simsii HOM05D007477 ORTHO05D009428 1.5e-35 153.7 197 46.2
Aqoxy3G00052 Aquilegia oxysepala HOM05D007477 ORTHO05D009428 3.3e-35 152.5 130 56.2
vmacro10662 Vaccinium macrocarpon HOM05D007477 ORTHO05D009428 6.2e-34 148.3 183 47.5
EL10Ac9g22714 Beta vulgaris HOM05D007477 ORTHO05D009428 4.4e-32 142.1 122 53.3
ATR0564G098 Amborella trichopoda HOM05D007477 ORTHO05D009428 2.2e-31 139.8 121 56.2
MD16G1022900 Malus domestica HOM05D007477 ORTHO05D009428 1.6e-29 133.7 140 52.1
Ah.01g007630 Amaranthus hybridus HOM05D007477 ORTHO05D009428 7.8e-29 131.3 125 52.8
Zm00001eb312390 Zea mays HOM05D007477 ORTHO05D009428 7.8e-29 131.3 105 56.2
Glyma.08G095100 Glycine max HOM05D007477 ORTHO05D009428 1.3e-28 130.6 183 42.6
Zm00001eb099410 Zea mays HOM05D007477 ORTHO05D009428 3.9e-28 129.0 103 56.3
Os05g0348100 Oryza sativa ssp. japonica HOM05D007477 ORTHO05D009428 3.2e-22 109.4 70 65.7
MD13G1021900 Malus domestica HOM05D007477 ORTHO05D009428 1.6e-21 107.1 101 51.5
SEGI_14142 Sequoiadendron giganteum HOM05D007477 ORTHO05D009428 5.2e-17 92.0 88 51.1
AUR62039526 Chenopodium quinoa HOM05D007477 ORTHO05D009428 1.2e-16 90.9 183 32.8
FAN22G0194 Fragaria x ananassa HOM05D007477 ORTHO05D009428 2.2e-15 86.7 193 33.7
Sabra10G0080700 Salix brachista HOM05D007477 ORTHO05D009428 4.2e-14 82.4 112 43.8
Pp3c24_18490 Physcomitrium patens HOM05D007477 ORTHO05D009428 5.4e-14 82.0 76 56.6
Mapoly0003s0200 Marchantia polymorpha HOM05D007477 ORTHO05D009428 3.5e-13 79.3 107 45.8
COL.COLO4_13101 Corchorus olitorius HOM05D007477 ORTHO05D009428 7.8e-13 78.2 108 43.5
TAR622G1153 Trochodendron aralioides HOM05D007477 ORTHO05D009428 6.2e-10 68.6 56 50.0
AagrBONN_evm.TU.Sc2ySwM_344.2533 Anthoceros agrestis HOM05D007477 ORTHO05D009428 3.8e-07 59.3 59 49.2


User provided reference genes

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