Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g25080 Schrenkiella parvula HOM05D010176 ORTHO05D012455 1.8e-48 195.7 105 100.0
Thhalv10019352m.g Eutrema salsugineum HOM05D010176 ORTHO05D012455 6.3e-41 170.6 105 86.7
AT1G69970 Arabidopsis thaliana HOM05D010176 ORTHO05D012455 1.6e-36 156.0 105 82.9
A02p16280 Brassica napus HOM05D010176 ORTHO05D012455 2.1e-36 155.6 103 78.6
BcaC03g15148 Brassica carinata HOM05D010176 ORTHO05D012455 2.7e-36 155.2 103 77.7
BcaC08g45847 Brassica carinata HOM05D010176 ORTHO05D012455 1.4e-35 152.9 105 80.0
CARHR063070 Cardamine hirsuta HOM05D010176 ORTHO05D012455 6.7e-35 150.6 108 77.8
AL2G29210 Arabidopsis lyrata HOM05D010176 ORTHO05D012455 8.8e-35 150.2 106 81.1
BcaB03g15521 Brassica carinata HOM05D010176 ORTHO05D012455 4.4e-34 147.9 105 76.2
BcaC08g46447 Brassica carinata HOM05D010176 ORTHO05D012455 5.7e-34 147.5 105 78.1
A07p36420 Brassica napus HOM05D010176 ORTHO05D012455 2.2e-33 145.6 105 77.1
Carub.0002s1667 Capsella rubella HOM05D010176 ORTHO05D012455 4.8e-33 144.4 114 76.3
BraA02t06686Z Brassica rapa HOM05D010176 ORTHO05D012455 2.0e-31 139.0 92 78.3
BolC2t08773H Brassica oleracea HOM05D010176 ORTHO05D012455 2.6e-31 138.7 92 77.2
C02p27100 Brassica napus HOM05D010176 ORTHO05D012455 5.0e-30 134.4 92 76.1
BcaB03g14774 Brassica carinata HOM05D010176 ORTHO05D012455 6.5e-30 134.0 105 74.3
BcaB05g24507 Brassica carinata HOM05D010176 ORTHO05D012455 8.0e-28 127.1 105 67.6
C06p43840 Brassica napus HOM05D010176 ORTHO05D012455 8.0e-28 127.1 92 76.1
BolC6t39456H Brassica oleracea HOM05D010176 ORTHO05D012455 8.0e-28 127.1 92 76.1
BcaB03g15522 Brassica carinata HOM05D010176 ORTHO05D031964 1.6e-20 102.8 81 70.4
BraA07t31214Z Brassica rapa HOM05D010176 ORTHO05D012455 1.0e-14 83.6 69 71.0
BcaC05g28357 Brassica carinata HOM05D010176 ORTHO05D012455 3.8e-14 81.6 65 63.1
A05p28930 Brassica napus HOM05D010176 ORTHO05D012455 3.4e-10 68.6 43 72.1
Potri.008G191500 Populus trichocarpa HOM05D004965 ORTHO05D004401 4.9e-09 64.7 107 44.9
Thecc.02G237300 Theobroma cacao HOM05D004965 ORTHO05D004401 1.8e-08 62.8 102 43.1
Potri.010G039800 Populus trichocarpa HOM05D004965 ORTHO05D004401 7.0e-08 60.8 103 41.7
Cc11_g13890 Coffea canephora HOM05D004965 ORTHO05D004401 1.6e-07 59.7 96 42.7
CiPaw.04G021200 Carya illinoinensis HOM05D004965 ORTHO05D004401 3.5e-07 58.5 97 43.3
MBI04_g09739_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 3.5e-07 58.5 34 85.3
Dinv24933 Davidia involucrata HOM05D004965 ORTHO05D004401 4.5e-07 58.2 93 47.3
EL10Ac6g13083 Beta vulgaris HOM05D004965 ORTHO05D004401 5.9e-07 57.8 34 82.4
TAR374G1442 Trochodendron aralioides HOM05D004965 ORTHO05D004401 1.0e-06 57.0 93 43.0
Atru.chr11.1915 Acer truncatum HOM05D004965 ORTHO05D004401 1.7e-06 56.2 34 79.4
Manes.05G094200 Manihot esculenta HOM05D004965 ORTHO05D004401 1.7e-06 56.2 103 42.7
Cpa.g.sc14.63 Carica papaya HOM05D004965 ORTHO05D004401 2.3e-06 55.8 97 40.2
Glyma.02G025700 Glycine max HOM05D004965 ORTHO05D004401 2.3e-06 55.8 93 41.9
PGR119G0489 Punica granatum HOM05D004965 ORTHO05D004401 2.3e-06 55.8 105 40.0
Ciclev10033175m.g Citrus clementina HOM05D004965 ORTHO05D004401 3.8e-06 55.1 100 44.0
MD16G1082900 Malus domestica HOM05D004965 ORTHO05D004401 3.8e-06 55.1 97 35.1
arahy.Tifrunner.gnm1.ann1.0GIF91 Arachis hypogaea HOM05D004965 ORTHO05D004401 6.6e-06 54.3 40 67.5
Duzib268G0529 Durio zibethinus HOM05D004965 ORTHO05D004401 6.6e-06 54.3 98 34.7
Gohir.A03G144700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 6.6e-06 54.3 34 79.4
MBI01_g13075_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 6.6e-06 54.3 98 41.8
Nn3g17067 Nelumbo nucifera HOM05D004965 ORTHO05D004401 6.6e-06 54.3 97 38.1
Nn4g22977 Nelumbo nucifera HOM05D004965 ORTHO05D004401 6.6e-06 54.3 66 51.5
Gohir.D02G167800 Gossypium hirsutum HOM05D004965 ORTHO05D004401 8.6e-06 53.9 34 76.5
Gorai.005G188200 Gossypium raimondii HOM05D004965 ORTHO05D004401 8.6e-06 53.9 34 76.5


User provided reference genes

Program Settings