Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 4.4e-242 840.9 430 100.0
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 5.1e-230 800.8 430 94.7
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 6.6e-230 800.4 430 95.3
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 1.9e-229 798.9 430 94.4
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 1.9e-229 798.9 430 94.4
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 1.2e-228 796.2 431 93.3
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 1.1e-227 793.1 432 94.4
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 1.4e-227 792.7 431 93.3
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 1.8e-227 792.3 430 94.4
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 1.2e-226 789.6 431 94.2
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 2.2e-225 785.4 431 94.0
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 4.9e-225 784.3 430 93.7
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.9e-213 745.7 428 88.1
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 2.1e-212 742.3 430 86.5
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 2.8e-204 715.3 431 84.0
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 1.4e-200 703.0 431 82.1
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 4.2e-200 701.4 431 81.7
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 7.1e-200 700.7 432 83.8
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 4.6e-199 698.0 431 81.2
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 2.3e-198 695.7 432 82.4
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 2.3e-198 695.7 432 82.4
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 3.0e-198 695.3 434 82.3
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 8.7e-198 693.7 428 82.7
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 8.7e-198 693.7 432 82.4
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 3.3e-197 691.8 446 78.7
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 5.7e-197 691.0 433 81.1
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 1.3e-196 689.9 432 81.7
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 2.2e-196 689.1 430 82.1
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 2.8e-196 688.7 432 81.7
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 3.1e-195 685.3 432 80.6
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 2.0e-194 682.6 431 80.7
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 4.5e-194 681.4 425 81.4
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 3.8e-193 678.3 432 80.6
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 1.1e-192 676.8 435 79.8
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 5.5e-192 674.5 435 79.1
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 1.6e-191 672.9 429 79.3
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 2.7e-191 672.2 435 80.5
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 3.6e-191 671.8 433 79.4
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 4.6e-191 671.4 380 87.4
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 2.3e-190 669.1 437 78.9
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 3.9e-190 668.3 431 79.8
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 8.8e-190 667.2 439 79.5
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 5.7e-189 664.5 431 79.6
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 7.4e-189 664.1 369 89.7
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 1.7e-188 662.9 431 80.3
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 2.2e-188 662.5 384 87.2
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 2.8e-188 662.1 391 85.2
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 2.8e-188 662.1 432 80.1
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 2.8e-188 662.1 434 80.0
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 3.7e-188 661.8 430 80.0
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 6.3e-188 661.0 431 79.6
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 1.1e-187 660.2 455 76.7
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 2.4e-187 659.1 431 81.0
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 4.1e-187 658.3 428 80.4
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 6.9e-187 657.5 393 85.2
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 1.2e-186 656.8 397 84.6
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 1.2e-186 656.8 395 84.3
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 2.0e-186 656.0 435 77.7
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 2.6e-186 655.6 431 79.4
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 2.6e-186 655.6 434 79.0
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 2.6e-186 655.6 442 76.7
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 5.9e-186 654.4 429 81.4
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 2.2e-185 652.5 429 79.0
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 2.9e-185 652.1 431 78.0
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 5.0e-185 651.4 425 80.0
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 3.2e-184 648.7 435 77.2
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 5.5e-184 647.9 435 77.0
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 9.4e-184 647.1 439 78.4
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 9.4e-184 647.1 393 84.5
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 1.2e-183 646.7 406 83.5
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 1.2e-183 646.7 463 75.6
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 3.6e-183 645.2 432 77.5
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 1.0e-182 643.7 439 77.4
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 3.0e-182 642.1 403 81.4
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 6.7e-182 641.0 365 88.2
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 1.1e-181 640.2 429 78.3
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 2.6e-181 639.0 431 75.9
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 1.4e-179 633.3 397 83.1
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 3.1e-179 632.1 432 77.1
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 7.0e-179 630.9 416 79.6
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 1.2e-178 630.2 432 77.8
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 2.6e-178 629.0 430 76.7
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 1.0e-177 627.1 432 77.5
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.7e-177 626.3 431 76.6
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.9e-176 622.9 431 77.0
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 2.5e-176 622.5 433 76.0
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 3.2e-176 622.1 432 75.9
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 3.2e-176 622.1 431 76.8
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 1.2e-175 620.2 429 76.7
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.2e-175 620.2 429 76.7
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 8.0e-175 617.5 431 76.3
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 8.8e-174 614.0 428 73.1
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 8.8e-174 614.0 340 87.9
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 1.5e-173 613.2 431 73.1
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 3.3e-173 612.1 328 90.9
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 7.4e-173 610.9 402 78.4
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 7.4e-173 610.9 364 85.2
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 1.7e-172 609.8 394 78.7
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 1.2e-170 603.6 430 73.7
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 2.2e-169 599.4 397 80.1
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 2.1e-167 592.8 382 78.8
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 3.6e-167 592.0 421 71.7
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 4.0e-166 588.6 437 73.7
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 5.2e-166 588.2 437 73.2
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 1.3e-164 583.6 402 71.4
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 6.3e-164 581.3 449 67.3
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 4.5e-162 575.1 411 70.6
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 2.2e-161 572.8 315 87.6
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 2.2e-161 572.8 360 77.2
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 1.5e-160 570.1 407 69.8
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 5.2e-158 561.6 384 77.9
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 4.4e-157 558.5 410 70.2
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 1.7e-156 556.6 431 68.0
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 1.2e-149 533.9 331 80.1
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 3.7e-148 528.9 425 65.9
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 5.4e-147 525.0 431 65.2
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 9.2e-147 524.2 370 76.8
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 9.2e-147 524.2 429 64.6
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 1.6e-146 523.5 429 65.0
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 3.9e-145 518.8 433 63.3
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 2.5e-144 516.2 374 69.8
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 7.3e-144 514.6 283 89.0
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 1.8e-142 510.0 434 62.0
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 4.9e-140 501.9 430 62.1
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 6.4e-140 501.5 427 62.5
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 8.3e-140 501.1 432 61.3
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 8.3e-140 501.1 432 61.3
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 1.7e-137 493.4 429 61.5
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 8.6e-137 491.1 429 61.3
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 1.5e-136 490.3 307 82.1
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 7.0e-131 471.5 268 86.2
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 8.9e-126 454.5 395 63.3
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 1.1e-123 447.6 378 60.3
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 4.6e-122 442.2 347 61.7
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 2.5e-120 436.4 314 71.0
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 2.2e-116 423.3 351 66.1
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 9.2e-115 417.9 312 66.3
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 2.7e-114 416.4 323 70.6
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.7e-113 413.7 282 73.4
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 8.4e-108 394.8 224 87.5
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 2.4e-86 323.6 224 74.1
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 3.1e-78 296.6 234 68.8
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 6.7e-73 278.9 192 72.4
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 8.5e-68 261.9 201 65.2
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 4.7e-66 256.1 297 51.9
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 7.0e-62 242.3 276 49.3
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 1.3e-60 238.0 180 67.8
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 3.6e-58 229.9 180 66.1
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 2.8e-55 220.3 153 69.3
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 2.1e-50 204.1 176 61.4
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 2.1e-50 204.1 316 38.9
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 3.6e-50 203.4 170 63.5
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 7.5e-48 195.7 101 92.1
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.4e-46 191.4 148 70.3
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 7.0e-46 189.1 101 89.1
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 1.7e-44 184.5 169 62.7
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 1.1e-43 181.8 176 58.0
Nn4g23594 Nelumbo nucifera HOM05D003910 ORTHO05D004622 3.2e-43 180.3 100 88.0
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 4.2e-43 179.9 104 84.6
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 1.0e-41 175.3 100 85.0
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 6.6e-36 156.0 76 94.7
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 2.5e-35 154.1 122 68.0
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 9.5e-35 152.1 212 39.6
Sp6g37550 Schrenkiella parvula HOM05D003910 ORTHO05D004622 9.5e-35 152.1 90 88.9
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 2.1e-34 151.0 77 89.6
TAR622G0657 Trochodendron aralioides HOM05D003910 ORTHO05D004622 2.0e-32 144.4 135 60.7
Actinidia03463 Actinidia chinensis HOM05D003910 ORTHO05D004622 8.6e-28 129.0 72 88.9
TAR371G0308 Trochodendron aralioides HOM05D003910 ORTHO05D004622 8.9e-25 119.0 74 81.1
arahy.Tifrunner.gnm1.ann1.ZWJ939 Arachis hypogaea HOM05D000074 ORTHO05D004622 2.3e-20 104.4 179 40.8
Lsat_1_v5_gn_8_139480 Lactuca sativa HOM05D003910 ORTHO05D004420 1.9e-19 101.3 106 55.7
Aa31sc107G60 Aethionema arabicum HOM05D003910 ORTHO05D059684 8.3e-15 85.9 49 87.8
Psat1g078960 Pisum sativum HOM05D003910 ORTHO05D004622 7.8e-13 79.3 77 58.4
Psat1g079000 Pisum sativum HOM05D003910 ORTHO05D004622 7.8e-13 79.3 77 58.4
SEGI_40510 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 3.9e-12 77.0 53 66.0
Nn3g17591 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.8e-09 68.2 36 91.7
Lsat_1_v5_gn_8_143861 Lactuca sativa HOM05D003910 ORTHO05D004622 4.0e-09 67.0 59 62.7
arahy.Tifrunner.gnm1.ann1.LHV34C Arachis hypogaea HOM05D003910 ORTHO05D004622 7.1e-06 56.2 62 58.1


User provided reference genes

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