Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g24810 Schrenkiella parvula HOM05D004366 ORTHO05D005058 1.6e-109 399.4 203 100.0
Thhalv10019150m.g Eutrema salsugineum HOM05D004366 ORTHO05D005058 3.2e-102 375.2 202 92.6
BcaB03g14744 Brassica carinata HOM05D004366 ORTHO05D005058 9.8e-99 363.6 203 90.1
BcaC08g46415 Brassica carinata HOM05D004366 ORTHO05D005058 9.8e-99 363.6 203 89.7
BolC6t39421H Brassica oleracea HOM05D004366 ORTHO05D005058 9.8e-99 363.6 203 89.7
A07p36060 Brassica napus HOM05D004366 ORTHO05D005058 2.8e-98 362.1 203 89.2
BraA07t30778Z Brassica rapa HOM05D004366 ORTHO05D005058 2.8e-98 362.1 202 89.6
BraA07t31186Z Brassica rapa HOM05D004366 ORTHO05D005058 2.8e-98 362.1 203 89.2
A07p31430 Brassica napus HOM05D004366 ORTHO05D005058 3.7e-98 361.7 202 89.1
C06p43460 Brassica napus HOM05D004366 ORTHO05D005058 3.7e-98 361.7 203 89.2
Sp3g28750 Schrenkiella parvula HOM05D004366 ORTHO05D005058 4.9e-98 361.3 206 89.8
C06p36720 Brassica napus HOM05D004366 ORTHO05D005058 1.4e-97 359.8 202 89.1
BolC6t38782H Brassica oleracea HOM05D004366 ORTHO05D005058 2.4e-97 359.0 202 88.6
AL2G28850 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 1.6e-96 356.3 203 88.7
Carub.0002s1634 Capsella rubella HOM05D004366 ORTHO05D005058 2.3e-95 352.4 203 88.7
BcaB03g15490 Brassica carinata HOM05D004366 ORTHO05D005058 5.0e-95 351.3 199 89.4
CARHR062670 Cardamine hirsuta HOM05D004366 ORTHO05D005058 8.6e-95 350.5 203 85.7
AT1G69680 Arabidopsis thaliana HOM05D004366 ORTHO05D005058 2.5e-94 349.0 203 86.7
Aa31LG4G11100 Aethionema arabicum HOM05D004366 ORTHO05D005058 8.3e-90 334.0 200 79.5
BcaC08g45875 Brassica carinata HOM05D004366 ORTHO05D005058 2.1e-85 319.3 205 81.5
THA.LOC104822115 Tarenaya hassleriana HOM05D004366 ORTHO05D005058 1.8e-84 316.2 202 75.2
AL7G43580 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 3.1e-84 315.5 184 87.0
Atru.chr11.1817 Acer truncatum HOM05D004366 ORTHO05D005058 1.3e-82 310.1 202 75.7
Eucgr.B03429 Eucalyptus grandis HOM05D004366 ORTHO05D005058 1.7e-82 309.7 203 77.3
MD13G1073400 Malus domestica HOM05D004366 ORTHO05D005058 2.2e-82 309.3 203 74.4
Manes.01G186800 Manihot esculenta HOM05D004366 ORTHO05D005058 4.9e-82 308.1 203 74.9
QL03p064520 Quercus lobata HOM05D004366 ORTHO05D005058 6.4e-82 307.8 201 75.6
CSS0003416 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.4e-81 306.6 195 78.5
Actinidia31203 Actinidia chinensis HOM05D004366 ORTHO05D005058 1.9e-81 306.2 200 76.0
FAN12G0862 Fragaria x ananassa HOM05D004366 ORTHO05D005058 4.1e-81 305.1 200 75.0
FvH4_4g31510 Fragaria vesca HOM05D004366 ORTHO05D005058 5.4e-81 304.7 200 75.0
CSS0021388 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 7.0e-81 304.3 195 77.9
Ciclev10032771m.g Citrus clementina HOM05D004366 ORTHO05D005058 1.6e-80 303.1 202 74.3
Prupe.1G272700 Prunus persica HOM05D004366 ORTHO05D005058 2.0e-80 302.8 203 73.4
Peaxi162Scf00026g03112 Petunia axillaris HOM05D004366 ORTHO05D005058 2.7e-80 302.4 195 75.4
Sc11g0001840 Simmondsia chinensis HOM05D004366 ORTHO05D005058 4.6e-80 301.6 202 73.3
ClCG05G024360 Citrullus lanatus HOM05D004366 ORTHO05D005058 1.3e-79 300.1 203 74.9
Thecc.02G350500 Theobroma cacao HOM05D004366 ORTHO05D005058 1.7e-79 299.7 198 73.2
MD16G1074700 Malus domestica HOM05D004366 ORTHO05D005058 2.3e-79 299.3 203 73.4
TWI12G0004 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 2.3e-79 299.3 196 77.0
Gohir.D13G074000 Gossypium hirsutum HOM05D004366 ORTHO05D005058 3.9e-79 298.5 203 69.5
MELO3C012087.2 Cucumis melo HOM05D004366 ORTHO05D005058 5.0e-79 298.1 203 73.9
Gorai.013G084600 Gossypium raimondii HOM05D004366 ORTHO05D005058 6.6e-79 297.7 203 69.5
FAN17G2550 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.1e-78 297.0 200 73.0
RcHm_v2.0_Chr4g0440001 Rosa chinensis HOM05D004366 ORTHO05D005058 1.1e-78 297.0 200 72.5
CAN.G473.145 Capsicum annuum HOM05D004366 ORTHO05D005058 1.5e-78 296.6 202 70.3
Aa31sc15G10 Aethionema arabicum HOM05D004366 ORTHO05D005058 1.9e-78 296.2 179 79.9
Gohir.A13G073900 Gossypium hirsutum HOM05D004366 ORTHO05D005058 1.9e-78 296.2 203 69.0
Rhsim12G0062000 Rhododendron simsii HOM05D004366 ORTHO05D005058 1.9e-78 296.2 201 73.1
CsaV3_5G032600 Cucumis sativus L. HOM05D004366 ORTHO05D005058 4.3e-78 295.0 203 73.9
Lj2g0005379 Lotus japonicus HOM05D004366 ORTHO05D005058 4.3e-78 295.0 191 75.9
CiPaw.06G083500 Carya illinoinensis HOM05D004366 ORTHO05D005058 5.6e-78 294.7 203 71.4
SalBow2G0488 Salvia bowleyana HOM05D004366 ORTHO05D005058 9.5e-78 293.9 203 71.4
Medtr8g463620 Medicago truncatula HOM05D004366 ORTHO05D005058 1.2e-77 293.5 201 71.6
Cpa.g.sc128.8 Carica papaya HOM05D004366 ORTHO05D005058 1.6e-77 293.1 200 73.0
Sed0027317 Sechium edule HOM05D004366 ORTHO05D005058 1.6e-77 293.1 203 71.9
Cc11_g13140 Coffea canephora HOM05D004366 ORTHO05D005058 2.1e-77 292.7 203 71.4
Nitab4.5_0000141g0240 Nicotiana tabacum HOM05D004366 ORTHO05D005058 2.1e-77 292.7 201 70.6
Lj3C1038T15 Lonicera japonica HOM05D004366 ORTHO05D005058 2.8e-77 292.4 196 72.4
Medtr5g039690 Medicago truncatula HOM05D004366 ORTHO05D005058 3.6e-77 292.0 201 71.1
Solyc01g010810.4 Solanum lycopersicum HOM05D004366 ORTHO05D005058 3.6e-77 292.0 202 68.8
Migut.L01306 Erythranthe guttata HOM05D004366 ORTHO05D005058 8.1e-77 290.8 202 70.8
Lalb_Chr04g0256161 Lupinus albus HOM05D004366 ORTHO05D005058 8.1e-77 290.8 198 71.7
Sopen01g006640 Solanum pennellii HOM05D004366 ORTHO05D005058 8.1e-77 290.8 202 68.3
COL.COLO4_22987 Corchorus olitorius HOM05D004366 ORTHO05D005058 4.0e-76 288.5 198 70.7
Ca_04775_v3 Cicer arietinum L. HOM05D004366 ORTHO05D005058 5.2e-76 288.1 198 70.2
FAN15G0746 Fragaria x ananassa HOM05D004366 ORTHO05D005058 5.2e-76 288.1 200 71.5
FAN24G0452 Fragaria x ananassa HOM05D004366 ORTHO05D005058 6.8e-76 287.7 200 71.0
Glyma.01G045700 Glycine max HOM05D004366 ORTHO05D005058 1.2e-75 287.0 198 70.2
Lsat_1_v5_gn_8_52741 Lactuca sativa HOM05D004366 ORTHO05D005058 1.5e-75 286.6 200 69.0
SGA_v2.0_scaffold20G09275 Striga asiatica HOM05D004366 ORTHO05D005058 1.5e-75 286.6 203 68.5
PGSC0003DMG400006558 Solanum tuberosum HOM05D004366 ORTHO05D005058 4.4e-75 285.0 195 69.7
FAN27G2895 Fragaria x ananassa HOM05D004366 ORTHO05D005058 9.8e-75 283.9 201 71.1
TWI53G1314 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 9.8e-75 283.9 202 69.8
Glyma.02G106000 Glycine max HOM05D004366 ORTHO05D005058 1.3e-74 283.5 198 69.2
Aa31LG9G5650 Aethionema arabicum HOM05D004366 ORTHO05D005058 2.9e-74 282.3 219 65.8
Psat0s2341g0040 Pisum sativum HOM05D004366 ORTHO05D005058 4.9e-74 281.6 198 70.7
EL10Ac6g13190 Beta vulgaris HOM05D004366 ORTHO05D005058 6.4e-74 281.2 197 68.0
FvH4_2g13310 Fragaria vesca HOM05D004366 ORTHO05D005058 1.4e-73 280.0 201 70.1
ECA233G4070 Erigeron canadensis HOM05D004366 ORTHO05D005058 2.4e-73 279.3 200 67.5
HanXRQChr08g0210471 Helianthus annuus HOM05D004366 ORTHO05D005058 5.4e-73 278.1 200 68.0
Hund05888 Selenicereus undatus HOM05D004366 ORTHO05D005058 5.4e-73 278.1 191 71.7
CSS0022805 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 7.1e-73 277.7 203 68.5
Nn4g23131 Nelumbo nucifera HOM05D004366 ORTHO05D005058 2.7e-72 275.8 198 70.2
AUR62026617 Chenopodium quinoa HOM05D004366 ORTHO05D005058 7.8e-72 274.2 195 70.3
Haze_12025 Corylus avellana HOM05D004366 ORTHO05D005058 7.8e-72 274.2 203 69.0
Phvul.002G086500 Phaseolus vulgaris HOM05D004366 ORTHO05D005058 7.8e-72 274.2 198 68.2
Aqoxy3G03355 Aquilegia oxysepala HOM05D004366 ORTHO05D005058 1.7e-71 273.1 198 68.2
HanXRQChr12g0362541 Helianthus annuus HOM05D004366 ORTHO05D005058 1.7e-71 273.1 202 64.9
MBI02_g23682_MAGBIO Magnolia biondii HOM05D004366 ORTHO05D005058 3.3e-70 268.9 198 68.2
arahy.Tifrunner.gnm1.ann1.5V6A51 Arachis hypogaea HOM05D004366 ORTHO05D005058 4.3e-70 268.5 206 65.0
Sabra13G0046200 Salix brachista HOM05D004366 ORTHO05D005058 5.6e-70 268.1 200 66.0
Nitab4.5_0005950g0010 Nicotiana tabacum HOM05D004366 ORTHO05D005058 1.2e-69 266.9 203 66.5
ATR0564G205 Amborella trichopoda HOM05D004366 ORTHO05D005058 2.1e-69 266.2 198 67.7
PGR102G1003 Punica granatum HOM05D004366 ORTHO05D005058 4.7e-69 265.0 198 66.2
HPP92_006020 Vanilla planifolia HOM05D004366 ORTHO05D005058 6.2e-69 264.6 184 70.1
unitig_22.g6909 Utricularia gibba HOM05D004366 ORTHO05D005058 1.8e-68 263.1 203 64.0
Oeu028302.2 Olea europaea HOM05D004366 ORTHO05D005058 8.9e-68 260.8 204 65.7
AUR62005764 Chenopodium quinoa HOM05D004366 ORTHO05D005058 1.2e-67 260.4 182 69.8
PSO339G1196 Papaver somniferum HOM05D004366 ORTHO05D005058 1.2e-67 260.4 195 66.7
AUR62034912 Chenopodium quinoa HOM05D004366 ORTHO05D005058 2.0e-67 259.6 181 70.2
CANSAT25G1390 Cannabis sativa HOM05D004366 ORTHO05D005058 2.6e-67 259.2 193 67.4
PSO384G0235 Papaver somniferum HOM05D004366 ORTHO05D005058 2.6e-67 259.2 195 66.7
CANSAT54G1616 Cannabis sativa HOM05D004366 ORTHO05D005058 4.4e-67 258.5 193 66.8
Os04g0459600 Oryza sativa ssp. japonica HOM05D004366 ORTHO05D005058 5.8e-67 258.1 203 63.5
SEGI_03925 Sequoiadendron giganteum HOM05D004366 ORTHO05D005058 1.9e-65 253.1 197 62.9
Potri.013G049900 Populus trichocarpa HOM05D004366 ORTHO05D005058 7.1e-65 251.1 191 66.5
AUR62028793 Chenopodium quinoa HOM05D004366 ORTHO05D005058 1.2e-64 250.4 195 65.6
arahy.Tifrunner.gnm1.ann1.QXP3RB Arachis hypogaea HOM05D004366 ORTHO05D005058 1.6e-64 250.0 178 66.9
PSO675G4203 Papaver somniferum HOM05D004366 ORTHO05D005058 2.1e-64 249.6 195 63.6
VMungo1215G0984 Vigna mungo HOM05D004366 ORTHO05D005058 7.8e-64 247.7 179 68.2
Hma1.2p1_0598F.1_g186660 Hydrangea macrophylla HOM05D004366 ORTHO05D005058 1.0e-63 247.3 326 46.0
Zm00001eb080830 Zea mays HOM05D004366 ORTHO05D005058 2.3e-63 246.1 198 60.6
Duzib248G1524 Durio zibethinus HOM05D004366 ORTHO05D005058 3.3e-62 242.3 203 62.1
Oeu013622.3 Olea europaea HOM05D004366 ORTHO05D005058 7.3e-62 241.1 198 62.6
Ah.03g135200 Amaranthus hybridus HOM05D004366 ORTHO05D005058 2.1e-61 239.6 198 61.6
SGA_v2.0_scaffold53G19387 Striga asiatica HOM05D004366 ORTHO05D005058 9.9e-59 230.7 240 53.3
vmacro01244 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 9.9e-59 230.7 252 50.8
GSVIVG01020010001 Vitis vinifera HOM05D004366 ORTHO05D005058 1.3e-58 230.3 168 69.6
Cfa008996 Carpinus fangiana HOM05D004366 ORTHO05D005058 7.8e-56 221.1 222 54.1
FAN22G2022 Fragaria x ananassa HOM05D004366 ORTHO05D005058 5.1e-55 218.4 235 53.2
TPR.G39101 Trifolium pratense HOM05D004366 ORTHO05D005058 5.3e-52 208.4 167 63.5
Pp3c9_14930 Physcomitrium patens HOM05D004366 ORTHO05D005058 1.2e-51 207.2 198 53.5
AagrBONN_evm.TU.Sc2ySwM_344.5131 Anthoceros agrestis HOM05D004366 ORTHO05D005058 2.6e-51 206.1 195 52.8
vmacro01242 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 3.5e-48 195.7 225 49.8
SMO147G0050 Selaginella moellendorffii HOM05D004366 ORTHO05D005058 8.1e-45 184.5 198 52.5
CBR_g17957 Chara braunii HOM05D004366 ORTHO05D005058 1.7e-42 176.8 195 46.2
DCAR_027406 Daucus carota HOM05D002775 ORTHO05D005058 1.4e-41 173.7 128 68.0
Dinv16634 Davidia involucrata HOM05D004366 ORTHO05D005058 4.6e-40 168.7 105 77.1
arahy.Tifrunner.gnm1.ann1.4LW61L Arachis hypogaea HOM05D004366 ORTHO05D005058 1.5e-38 163.7 120 63.3
AagrBONN_evm.TU.Sc2ySwM_362.1786 Anthoceros agrestis HOM05D004366 ORTHO05D005058 7.4e-38 161.4 173 49.1
TAR629G2773 Trochodendron aralioides HOM05D004366 ORTHO05D005058 2.4e-36 156.4 105 70.5
Pp3c15_14240 Physcomitrium patens HOM05D004366 ORTHO05D005058 3.1e-36 156.0 152 53.3
SalBow2G3183 Salvia bowleyana HOM05D004366 ORTHO05D005058 1.2e-35 154.1 115 67.0
MD11G1061500 Malus domestica HOM05D004366 ORTHO05D005058 1.6e-32 143.7 112 64.3
Mapoly0113s0045 Marchantia polymorpha HOM05D004366 ORTHO05D005058 4.6e-32 142.1 206 41.3
Potri.019G023800 Populus trichocarpa HOM05D004366 ORTHO05D005058 5.7e-30 135.2 88 70.5
MSTRG.695 Avicennia marina HOM05D004366 ORTHO05D005058 3.7e-29 132.5 81 75.3
arahy.Tifrunner.gnm1.ann1.MY0RSE Arachis hypogaea HOM05D004366 ORTHO05D005058 1.1e-28 131.0 103 62.1
CSS0042124 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.2e-27 127.5 81 75.3
CSS0000370 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.5e-27 127.1 74 81.1
MCO13G325 Micromonas commoda HOM05D004366 ORTHO05D005058 2.2e-26 123.2 209 37.3
Lj6A789T49 Lonicera japonica HOM05D004366 ORTHO05D005058 6.5e-26 121.7 90 67.8
arahy.Tifrunner.gnm1.ann1.J913Y5 Arachis hypogaea HOM05D004366 ORTHO05D005058 7.2e-25 118.2 74 74.3
CAN.G154.11 Capsicum annuum HOM05D004366 ORTHO05D005058 1.6e-24 117.1 131 47.3
BcaC07g37109 Brassica carinata HOM05D004366 ORTHO05D005058 2.7e-24 116.3 102 62.7
arahy.Tifrunner.gnm1.ann1.D4KK35 Arachis hypogaea HOM05D004366 ORTHO05D005058 2.3e-23 113.2 129 47.3
C08p04780 Brassica napus HOM05D004366 ORTHO05D005058 3.0e-23 112.8 89 67.4
BolC8t47277H Brassica oleracea HOM05D004366 ORTHO05D005058 5.7e-22 108.6 94 64.9
PGSC0003DMG400015729 Solanum tuberosum HOM05D004366 ORTHO05D005058 5.7e-22 108.6 102 55.9
FAN07G2952 Fragaria x ananassa HOM05D004366 ORTHO05D005058 9.7e-22 107.8 72 69.4
PRCOL_00002884 Prasinoderma coloniale HOM05D004366 ORTHO05D005058 2.2e-18 96.7 195 32.8
Rhsim11G0057700 Rhododendron simsii HOM05D004366 ORTHO05D005058 2.2e-18 96.7 82 62.2
arahy.Tifrunner.gnm1.ann1.N9R1JE Arachis hypogaea HOM05D004366 ORTHO05D005058 6.5e-18 95.1 90 55.6
arahy.Tifrunner.gnm1.ann1.8CQ436 Arachis hypogaea HOM05D004366 ORTHO05D005058 1.9e-17 93.6 68 66.2
Lsat_1_v5_gn_1_103541 Lactuca sativa HOM05D004366 ORTHO05D005058 2.0e-14 83.6 105 42.9
Cre05.g244850 Chlamydomonas reinhardtii HOM05D004366 ORTHO05D005058 4.3e-14 82.4 200 29.5
arahy.Tifrunner.gnm1.ann1.NKT7G2 Arachis hypogaea HOM05D004366 ORTHO05D005058 1.4e-12 77.4 115 40.0
SalBow1G5797 Salvia bowleyana HOM05D004366 ORTHO05D005058 1.5e-11 73.9 45 73.3
CANSAT54G0841 Cannabis sativa HOM05D001400 ORTHO05D001795 3.4e-11 72.8 49 67.3
A08p04480 Brassica napus HOM05D004366 ORTHO05D005058 7.7e-11 71.6 71 52.1
BraA08t32473Z Brassica rapa HOM05D004366 ORTHO05D005058 4.2e-09 65.9 41 73.2
AUR62028525 Chenopodium quinoa HOM05D004366 ORTHO05D000022 1.2e-08 64.3 45 66.7
PSO339G3282 Papaver somniferum HOM05D000073 ORTHO05D000033 1.8e-07 60.5 48 60.4
Atru.chr9.1643 Acer truncatum HOM05D004366 ORTHO05D005058 3.9e-07 59.3 43 62.8


User provided reference genes

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