Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g24250 Schrenkiella parvula HOM05D005225 ORTHO05D006830 1.0e-282 976.1 487 100.0
Thhalv10019460m.g Eutrema salsugineum HOM05D005225 ORTHO05D006830 4.7e-248 860.9 480 89.4
AT1G69190 Arabidopsis thaliana HOM05D005225 ORTHO05D006830 1.6e-232 809.3 489 83.2
AT4G30000 Arabidopsis thaliana HOM05D005225 ORTHO05D006830 1.8e-223 779.2 485 80.2
Sp7g27800 Schrenkiella parvula HOM05D005225 ORTHO05D006830 5.2e-223 777.7 485 79.6
AL2G28280 Arabidopsis lyrata HOM05D005225 ORTHO05D006830 3.4e-222 775.0 456 83.1
AL7G22240 Arabidopsis lyrata HOM05D005225 ORTHO05D006830 5.8e-222 774.2 485 79.8
Carub.0007s1065 Capsella rubella HOM05D005225 ORTHO05D006830 6.4e-221 770.8 486 78.6
Thhalv10024845m.g Eutrema salsugineum HOM05D005225 ORTHO05D006830 1.4e-220 769.6 485 79.6
CARHR237920 Cardamine hirsuta HOM05D005225 ORTHO05D006830 4.1e-220 768.1 482 79.7
Aa31LG2G20560 Aethionema arabicum HOM05D005225 ORTHO05D006830 3.0e-218 761.9 481 78.6
BraA01t00759Z Brassica rapa HOM05D005225 ORTHO05D006830 6.6e-218 760.8 482 78.0
BcaC09g51778 Brassica carinata HOM05D005225 ORTHO05D006830 1.6e-216 756.1 482 76.8
C01p09090 Brassica napus HOM05D005225 ORTHO05D006830 1.6e-216 756.1 482 76.8
BolC1t00900H Brassica oleracea HOM05D005225 ORTHO05D006830 1.6e-216 756.1 482 76.8
A01p08120 Brassica napus HOM05D005225 ORTHO05D006830 2.8e-216 755.4 482 76.8
THA.LOC104821999 Tarenaya hassleriana HOM05D005225 ORTHO05D006830 1.4e-212 743.0 482 77.0
Thecc.02G327800 Theobroma cacao HOM05D005225 ORTHO05D006830 2.9e-197 692.2 465 72.5
COL.COLO4_27858 Corchorus olitorius HOM05D005225 ORTHO05D006830 6.4e-197 691.0 467 71.1
Manes.10G001000 Manihot esculenta HOM05D005225 ORTHO05D006830 8.4e-197 690.6 467 72.2
Aa31sc367G20 Aethionema arabicum HOM05D005225 ORTHO05D006830 2.7e-195 685.6 469 70.8
TWI79G0826 Tripterygium wilfordii HOM05D005225 ORTHO05D006830 3.5e-195 685.3 482 68.7
Cpa.g.sc1.153 Carica papaya HOM05D005225 ORTHO05D006830 1.3e-194 683.3 463 70.2
Dinv34052 Davidia involucrata HOM05D005225 ORTHO05D006830 8.7e-194 680.6 467 70.7
Potri.008G097400 Populus trichocarpa HOM05D005225 ORTHO05D006830 1.1e-193 680.2 481 69.2
TWI75G0045 Tripterygium wilfordii HOM05D005225 ORTHO05D006830 1.5e-193 679.9 482 68.9
RcHm_v2.0_Chr7g0212391 Rosa chinensis HOM05D005225 ORTHO05D006830 3.3e-193 678.7 467 71.7
arahy.Tifrunner.gnm1.ann1.BAL663 Arachis hypogaea HOM05D005225 ORTHO05D006830 7.3e-193 677.6 481 68.2
Lalb_Chr04g0255551 Lupinus albus HOM05D005225 ORTHO05D006830 7.3e-193 677.6 467 69.6
Sabra08G0073600 Salix brachista HOM05D005225 ORTHO05D006830 1.6e-192 676.4 482 68.7
arahy.Tifrunner.gnm1.ann1.W47LMS Arachis hypogaea HOM05D005225 ORTHO05D006830 2.8e-192 675.6 481 68.2
MSTRG.7736 Avicennia marina HOM05D005225 ORTHO05D006830 2.8e-192 675.6 467 69.2
Lj2g0003273 Lotus japonicus HOM05D005225 ORTHO05D006830 2.8e-192 675.6 481 67.4
arahy.Tifrunner.gnm1.ann1.BYWX90 Arachis hypogaea HOM05D005225 ORTHO05D006830 8.1e-192 674.1 481 67.8
Duzib251G0330 Durio zibethinus HOM05D005225 ORTHO05D006830 8.1e-192 674.1 467 70.4
arahy.Tifrunner.gnm1.ann1.1IY8V2 Arachis hypogaea HOM05D005225 ORTHO05D006830 1.1e-191 673.7 481 68.0
Gorai.008G176100 Gossypium raimondii HOM05D005225 ORTHO05D006830 1.1e-191 673.7 467 69.8
Cfa008863 Carpinus fangiana HOM05D005225 ORTHO05D006830 3.1e-191 672.2 484 68.6
Ciclev10031260m.g Citrus clementina HOM05D005225 ORTHO05D006830 3.1e-191 672.2 481 68.6
Eucgr.F03034 Eucalyptus grandis HOM05D005225 ORTHO05D006830 3.1e-191 672.2 468 69.4
Rhsim09G0126000 Rhododendron simsii HOM05D005225 ORTHO05D006830 9.0e-191 670.6 467 69.4
DCAR_004043 Daucus carota HOM05D005225 ORTHO05D006830 1.5e-190 669.8 467 69.8
Prupe.1G566200 Prunus persica HOM05D005225 ORTHO05D006830 2.0e-190 669.5 467 69.2
Haze_11886 Corylus avellana HOM05D005225 ORTHO05D006830 4.5e-190 668.3 481 68.6
CsaV3_5G008630 Cucumis sativus L. HOM05D005225 ORTHO05D006830 4.5e-190 668.3 467 69.2
SalBow2G3373 Salvia bowleyana HOM05D005225 ORTHO05D006830 4.5e-190 668.3 467 67.9
QL03p073750 Quercus lobata HOM05D005225 ORTHO05D006830 7.6e-190 667.5 485 66.6
Peaxi162Scf00175g00052 Petunia axillaris HOM05D005225 ORTHO05D006830 9.9e-190 667.2 468 68.2
Cc11_g11810 Coffea canephora HOM05D005225 ORTHO05D006830 1.7e-189 666.4 470 68.7
Hund25165 Selenicereus undatus HOM05D005225 ORTHO05D006830 1.7e-189 666.4 480 65.8
MELO3C020077.2 Cucumis melo HOM05D005225 ORTHO05D006830 2.9e-189 665.6 483 67.5
Migut.L01174 Erythranthe guttata HOM05D005225 ORTHO05D006830 2.9e-189 665.6 469 67.6
Medtr5g044980 Medicago truncatula HOM05D005225 ORTHO05D006830 3.8e-189 665.2 482 66.0
TPR.G23155 Trifolium pratense HOM05D005225 ORTHO05D006830 8.4e-189 664.1 484 65.9
vmacro01311 Vaccinium macrocarpon HOM05D005225 ORTHO05D006830 8.4e-189 664.1 482 66.6
FvH4_4g10620 Fragaria vesca HOM05D005225 ORTHO05D006830 1.9e-188 662.9 467 68.7
FAN12G0824 Fragaria x ananassa HOM05D005225 ORTHO05D006830 1.9e-188 662.9 467 69.0
MD16G1281400 Malus domestica HOM05D005225 ORTHO05D006830 1.9e-188 662.9 467 68.3
Sed0018680 Sechium edule HOM05D005225 ORTHO05D006830 4.2e-188 661.8 477 67.3
Sopen05g006880 Solanum pennellii HOM05D005225 ORTHO05D006830 4.2e-188 661.8 473 67.0
AUR62003082 Chenopodium quinoa HOM05D005225 ORTHO05D006830 7.1e-188 661.0 480 64.8
CSS0003869 Camellia sinensis var. sinensis HOM05D005225 ORTHO05D006830 9.3e-188 660.6 482 65.4
FAN12G2267 Fragaria x ananassa HOM05D005225 ORTHO05D006830 1.2e-187 660.2 467 68.7
Glyma.02G120400 Glycine max HOM05D005225 ORTHO05D006830 1.2e-187 660.2 481 66.5
PGR102G0586 Punica granatum HOM05D005225 ORTHO05D006830 1.2e-187 660.2 477 67.1
Atru.chr11.1603 Acer truncatum HOM05D005225 ORTHO05D006830 1.6e-187 659.8 480 67.3
CAN.G707.21 Capsicum annuum HOM05D005225 ORTHO05D006830 1.6e-187 659.8 467 67.7
ClCG11G000950 Citrullus lanatus HOM05D005225 ORTHO05D006830 1.6e-187 659.8 467 67.9
QL02p092646 Quercus lobata HOM05D005225 ORTHO05D006830 1.6e-187 659.8 485 65.8
Ah.03g138790 Amaranthus hybridus HOM05D005225 ORTHO05D006830 2.1e-187 659.4 463 68.3
Ca_05000_v3 Cicer arietinum L. HOM05D005225 ORTHO05D006830 2.1e-187 659.4 481 65.1
PGSC0003DMG400028362 Solanum tuberosum HOM05D005225 ORTHO05D006830 3.5e-187 658.7 467 67.2
Psat2g131720 Pisum sativum HOM05D005225 ORTHO05D006830 4.6e-187 658.3 467 67.5
PSO017G1582 Papaver somniferum HOM05D005225 ORTHO05D006830 7.9e-187 657.5 467 67.5
VMungo1215G0332 Vigna mungo HOM05D005225 ORTHO05D006830 1.0e-186 657.1 478 66.3
Hma1.2p1_0051F.1_g029440 Hydrangea macrophylla HOM05D005225 ORTHO05D006830 1.7e-186 656.4 482 67.4
MBI16_g03095_MAGBIO Magnolia biondii HOM05D005225 ORTHO05D006830 1.7e-186 656.4 467 68.3
HanXRQChr12g0375111 Helianthus annuus HOM05D005225 ORTHO05D006830 3.0e-186 655.6 479 65.8
TPR.G23738 Trifolium pratense HOM05D005225 ORTHO05D006830 8.7e-186 654.1 484 65.1
CANSAT80G1664 Cannabis sativa HOM05D005225 ORTHO05D006830 1.9e-185 652.9 467 68.5
Sc04g0007480 Simmondsia chinensis HOM05D005225 ORTHO05D006830 7.4e-185 651.0 475 65.9
Lsat_1_v5_gn_3_53701 Lactuca sativa HOM05D005225 ORTHO05D006830 1.6e-184 649.8 479 67.2
unitig_22.g6894 Utricularia gibba HOM05D005225 ORTHO05D006830 3.6e-184 648.7 483 65.6
ECA246G3793 Erigeron canadensis HOM05D005225 ORTHO05D006830 1.8e-183 646.4 481 66.1
Lj3P1029T28 Lonicera japonica HOM05D005225 ORTHO05D006830 1.8e-183 646.4 476 66.6
HanXRQChr03g0092011 Helianthus annuus HOM05D005225 ORTHO05D006830 2.4e-183 646.0 479 64.7
Aqoxy6G03037 Aquilegia oxysepala HOM05D005225 ORTHO05D006830 9.9e-182 640.6 442 70.4
Nn8g41224 Nelumbo nucifera HOM05D005225 ORTHO05D006830 2.2e-181 639.4 452 68.4
GSVIVG01012238001 Vitis vinifera HOM05D005225 ORTHO05D006830 6.4e-181 637.9 481 66.5
Lalb_Chr10g0098931 Lupinus albus HOM05D005225 ORTHO05D006830 3.5e-179 632.1 481 64.0
CiPaw.06G093200 Carya illinoinensis HOM05D005225 ORTHO05D006830 5.6e-177 624.8 445 69.7
Nitab4.5_0000231g0060 Nicotiana tabacum HOM05D005225 ORTHO05D006830 9.6e-177 624.0 442 67.2
Nitab4.5_0007734g0040 Nicotiana tabacum HOM05D005225 ORTHO05D006830 6.2e-176 621.3 442 67.2
EL10Ac6g15018 Beta vulgaris HOM05D005225 ORTHO05D006830 5.3e-175 618.2 452 65.5
HPP92_017786 Vanilla planifolia HOM05D005225 ORTHO05D006830 2.9e-173 612.5 482 61.4
Oeu055095.2 Olea europaea HOM05D005225 ORTHO05D006830 3.8e-173 612.1 442 67.2
Os07g0618500 Oryza sativa ssp. japonica HOM05D005225 ORTHO05D006830 4.9e-173 611.7 463 62.4
Zm00001eb319990 Zea mays HOM05D005225 ORTHO05D006830 4.2e-172 608.6 479 60.8
Gohir.A12G160100 Gossypium hirsutum HOM05D005225 ORTHO05D006830 9.3e-172 607.4 465 64.7
SEGI_35565 Sequoiadendron giganteum HOM05D005225 ORTHO05D006830 1.8e-170 603.2 469 61.0
Gohir.D12G163500 Gossypium hirsutum HOM05D005225 ORTHO05D006830 8.7e-170 600.9 467 63.8
SGA_v2.0_scaffold85G26791 Striga asiatica HOM05D005225 ORTHO05D006830 1.8e-167 593.2 463 62.9
ATR0827G107 Amborella trichopoda HOM05D005225 ORTHO05D006830 5.3e-167 591.7 472 61.2
SHI01330 Sapria himalayana HOM05D005225 ORTHO05D006830 2.2e-165 586.3 465 65.2
CSS0031076 Camellia sinensis var. sinensis HOM05D005225 ORTHO05D006830 7.9e-163 577.8 467 60.8
FAN17G1346 Fragaria x ananassa HOM05D005225 ORTHO05D006830 1.1e-161 573.9 407 69.0
TAR629G1144 Trochodendron aralioides HOM05D005225 ORTHO05D006830 2.8e-160 569.3 483 61.1
FAN07G1983 Fragaria x ananassa HOM05D005225 ORTHO05D006830 2.3e-154 549.7 387 68.7
Solyc05g012090.4 Solanum lycopersicum HOM05D005225 ORTHO05D006830 3.4e-150 535.8 378 67.7
Pp3c27_4310 Physcomitrium patens HOM05D005225 ORTHO05D006830 7.9e-147 524.6 478 53.1
MD06G1024100 Malus domestica HOM05D005225 ORTHO05D006830 1.4e-146 523.9 442 58.4
Actinidia00572 Actinidia chinensis HOM05D005225 ORTHO05D006830 5.2e-146 521.9 467 59.1
AagrBONN_evm.TU.Sc2ySwM_362.716 Anthoceros agrestis HOM05D005225 ORTHO05D006830 1.7e-144 516.9 463 52.1
Mapoly0021s0079 Marchantia polymorpha HOM05D005225 ORTHO05D006830 2.5e-140 503.1 450 54.2
SEGI_04122 Sequoiadendron giganteum HOM05D005225 ORTHO05D006830 3.7e-136 489.2 469 51.8
SMO358G0268 Selaginella moellendorffii HOM05D005225 ORTHO05D006830 5.3e-135 485.3 462 48.7
Nn2g15478 Nelumbo nucifera HOM05D005225 ORTHO05D006830 8.0e-131 471.5 326 69.0
AUR62007898 Chenopodium quinoa HOM05D005225 ORTHO05D006830 3.4e-129 466.1 340 64.7
Glyma.01G062200 Glycine max HOM05D005225 ORTHO05D006830 4.4e-129 465.7 346 65.6
RcHm_v2.0_Chr2g0139541 Rosa chinensis HOM05D005225 ORTHO05D006830 9.1e-127 458.0 318 71.1
CBR_g61480 Chara braunii HOM05D005225 ORTHO05D006830 2.9e-117 426.4 480 46.7
Phvul.007G262101 Phaseolus vulgaris HOM05D005225 ORTHO05D006830 6.6e-117 425.2 293 69.3
Phvul.001G131450 Phaseolus vulgaris HOM05D005225 ORTHO05D006830 3.3e-116 422.9 293 69.3
SGA_v2.0_scaffold45G17115 Striga asiatica HOM05D001733 ORTHO05D001882 2.3e-109 400.2 381 54.3
CDE04G0587 Ceratophyllum demersum HOM05D005225 ORTHO05D006830 1.7e-101 374.0 284 64.8
MCO11G893 Micromonas commoda HOM05D005225 ORTHO05D006830 1.2e-94 351.3 548 39.4
HanXRQChr04g0120931 Helianthus annuus HOM05D005225 ORTHO05D006830 4.0e-90 336.3 251 64.9
Cre10.g428550 Chlamydomonas reinhardtii HOM05D005225 ORTHO05D006830 4.4e-89 332.8 618 35.4
Cfa024768 Carpinus fangiana HOM05D005225 ORTHO05D124687 1.0e-77 295.0 478 39.1
PRCOL_00003253 Prasinoderma coloniale HOM05D005225 ORTHO05D006830 1.0e-77 295.0 461 38.8
Nn4g23480 Nelumbo nucifera HOM05D005225 ORTHO05D006830 7.9e-54 215.7 157 65.0
LjContig00272g0016968 Lotus japonicus HOM05D005225 ORTHO05D006830 4.6e-46 189.9 215 47.9
SGA_v2.0_scaffold16G07808 Striga asiatica HOM05D005225 ORTHO05D006830 1.1e-44 185.3 242 43.8
Actinidia16153 Actinidia chinensis HOM05D005225 ORTHO05D006830 2.0e-36 157.9 309 34.6
RcHm_v2.0_Chr2g0139531 Rosa chinensis HOM05D005225 ORTHO05D006830 4.2e-31 140.2 134 56.7
Nn4g23481 Nelumbo nucifera HOM05D005225 ORTHO05D006830 1.2e-30 138.7 110 63.6
SGA_v2.0_scaffold16G07809 Striga asiatica HOM05D005225 ORTHO05D048239 2.1e-30 137.9 118 55.9
TAR371G0727 Trochodendron aralioides HOM05D005225 ORTHO05D006830 3.9e-29 133.7 242 37.2
HanXRQChr04g0120941 Helianthus annuus HOM05D005225 ORTHO05D048239 6.3e-27 126.3 87 63.2
CARHR062340 Cardamine hirsuta HOM05D005225 ORTHO05D006830 8.2e-27 125.9 75 80.0
HanXRQChr15g0477151 Helianthus annuus HOM05D005225 ORTHO05D044060 2.2e-24 117.9 94 63.8
QL06p011620 Quercus lobata HOM05D005225 ORTHO05D006830 5.3e-18 96.7 68 69.1
AUR62007899 Chenopodium quinoa HOM05D005225 ORTHO05D044060 3.8e-16 90.5 70 57.1
Medtr0076s0050 Medicago truncatula HOM05D005225 ORTHO05D265034 4.7e-14 83.6 95 46.3


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