Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g23900 Schrenkiella parvula HOM05D005816 ORTHO05D006915 3.9e-44 181.4 115 100.0
BcaB05g24412 Brassica carinata HOM05D005816 ORTHO05D006915 2.3e-36 155.6 115 73.0
BcaC03g14990 Brassica carinata HOM05D005816 ORTHO05D006915 6.9e-33 144.1 115 77.4
Thhalv10019343m.g Eutrema salsugineum HOM05D005816 ORTHO05D006915 9.0e-33 143.7 115 72.2
BcaB03g15849 Brassica carinata HOM05D005816 ORTHO05D006915 2.5e-30 135.6 115 73.0
AL2G27750 Arabidopsis lyrata HOM05D005816 ORTHO05D006915 5.5e-30 134.4 115 66.1
CARHR061620 Cardamine hirsuta HOM05D005816 ORTHO05D006915 2.1e-29 132.5 115 66.1
BcaC08g46328 Brassica carinata HOM05D005816 ORTHO05D006915 3.5e-29 131.7 115 66.1
BolC6t39316H Brassica oleracea HOM05D005816 ORTHO05D006915 3.5e-29 131.7 115 66.1
AT1G68795 Arabidopsis thaliana HOM05D005816 ORTHO05D006915 2.8e-26 122.1 115 72.2
Carub.0002s1536 Capsella rubella HOM05D005816 ORTHO05D006915 2.8e-26 122.1 117 63.2
THA.LOC104821965 Tarenaya hassleriana HOM05D005816 ORTHO05D006915 6.3e-18 94.4 125 50.4
Aa31sc79G90 Aethionema arabicum HOM05D005816 ORTHO05D006915 3.4e-16 88.6 114 50.0
Nn3g17700 Nelumbo nucifera HOM05D005816 ORTHO05D006915 1.6e-13 79.7 124 42.7
Lalb_Chr21g0313371 Lupinus albus HOM05D005816 ORTHO05D006915 2.1e-13 79.3 118 44.1
CiPaw.16G002600 Carya illinoinensis HOM05D005816 ORTHO05D006915 3.6e-13 78.6 117 44.4
QL01p001040 Quercus lobata HOM05D005816 ORTHO05D006915 7.9e-13 77.4 122 41.8
Ciclev10033717m.g Citrus clementina HOM05D005816 ORTHO05D006915 1.4e-12 76.6 125 39.2
PGR119G1376 Punica granatum HOM05D005816 ORTHO05D006915 2.3e-12 75.9 116 40.5
Lalb_Chr10g0099661 Lupinus albus HOM05D005816 ORTHO05D006915 6.7e-12 74.3 115 40.0
FAN17G1568 Fragaria x ananassa HOM05D005816 ORTHO05D006915 1.5e-11 73.2 78 51.3
FAN07G2890 Fragaria x ananassa HOM05D005816 ORTHO05D006915 2.5e-11 72.4 78 51.3
Duzib251G0462 Durio zibethinus HOM05D005816 ORTHO05D006915 3.3e-11 72.0 119 41.2
TPR.G9813 Trifolium pratense HOM05D005816 ORTHO05D006915 4.3e-11 71.6 116 42.2
Lsat_1_v5_gn_4_19200 Lactuca sativa HOM05D005816 ORTHO05D006915 5.7e-11 71.2 115 40.9
Atru.chr11.1371 Acer truncatum HOM05D005816 ORTHO05D006915 7.4e-11 70.9 131 38.2
FvH4_4g28190 Fragaria vesca HOM05D005816 ORTHO05D006915 7.4e-11 70.9 78 51.3
FAN12G1213 Fragaria x ananassa HOM05D005816 ORTHO05D006915 7.4e-11 70.9 78 51.3
Manes.06G073000 Manihot esculenta HOM05D005816 ORTHO05D006915 7.4e-11 70.9 122 40.2
Cc11_g10680 Coffea canephora HOM05D005816 ORTHO05D006915 1.7e-10 69.7 112 41.1
MELO3C005357.2 Cucumis melo HOM05D005816 ORTHO05D006915 2.8e-10 68.9 123 39.0
Thecc.02G362100 Theobroma cacao HOM05D005816 ORTHO05D006915 2.8e-10 68.9 126 41.3
Sed0000064 Sechium edule HOM05D005816 ORTHO05D006915 3.7e-10 68.6 121 40.5
Potri.010G130400 Populus trichocarpa HOM05D005816 ORTHO05D006915 4.8e-10 68.2 116 38.8
TAR629G1032 Trochodendron aralioides HOM05D005816 ORTHO05D006915 4.8e-10 68.2 115 42.6
CSS0007623 Camellia sinensis var. sinensis HOM05D005816 ORTHO05D006915 6.3e-10 67.8 117 42.7
Medtr1g093800 Medicago truncatula HOM05D005816 ORTHO05D006915 6.3e-10 67.8 116 42.2
HanXRQChr16g0528861 Helianthus annuus HOM05D005816 ORTHO05D006915 1.1e-09 67.0 115 39.1
Glyma.10G205100 Glycine max HOM05D005816 ORTHO05D006915 1.4e-09 66.6 116 40.5
Gorai.013G079400 Gossypium raimondii HOM05D005816 ORTHO05D006915 1.4e-09 66.6 121 41.3
Prupe.1G304500 Prunus persica HOM05D005816 ORTHO05D006915 1.8e-09 66.2 142 36.6
Sabra08G0087500 Salix brachista HOM05D005816 ORTHO05D006915 1.8e-09 66.2 122 41.8
Hma1.2p1_0862F.1_g229870 Hydrangea macrophylla HOM05D005816 ORTHO05D006915 2.4e-09 65.9 115 40.0
Gohir.A07G038800 Gossypium hirsutum HOM05D005816 ORTHO05D006915 4.1e-09 65.1 117 39.3
Gohir.A13G071300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 4.1e-09 65.1 121 39.7
RcHm_v2.0_Chr4g0435951 Rosa chinensis HOM05D005816 ORTHO05D006915 4.1e-09 65.1 80 46.2
CiPaw.15G002700 Carya illinoinensis HOM05D005816 ORTHO05D006915 5.3e-09 64.7 133 38.3
COL.COLO4_07860 Corchorus olitorius HOM05D005816 ORTHO05D006915 5.3e-09 64.7 129 37.2
Duzib248G0754 Durio zibethinus HOM05D005816 ORTHO05D006915 5.3e-09 64.7 120 39.2
Eucgr.G02356 Eucalyptus grandis HOM05D005816 ORTHO05D006915 5.3e-09 64.7 58 55.2
Gohir.D13G069300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 5.3e-09 64.7 121 41.3
Manes.14G096700 Manihot esculenta HOM05D005816 ORTHO05D006915 5.3e-09 64.7 119 41.2
Glyma.20G185400 Glycine max HOM05D005816 ORTHO05D006915 6.9e-09 64.3 118 38.1
VMungo0720G2795 Vigna mungo HOM05D005816 ORTHO05D006915 6.9e-09 64.3 116 41.4
Phvul.007G101800 Phaseolus vulgaris HOM05D005816 ORTHO05D006915 1.5e-08 63.2 116 39.7
Thecc.03G027700 Theobroma cacao HOM05D005816 ORTHO05D006915 1.5e-08 63.2 116 40.5
Aqoxy3G00384 Aquilegia oxysepala HOM05D005816 ORTHO05D006915 2.6e-08 62.4 116 42.2
HanXRQChr05g0149681 Helianthus annuus HOM05D005816 ORTHO05D006915 5.9e-08 61.2 113 35.4
ClCG01G005730 Citrullus lanatus HOM05D005816 ORTHO05D006915 7.7e-08 60.8 110 37.3
Glyma.05G013600 Glycine max HOM05D005816 ORTHO05D006915 1.0e-07 60.5 132 41.7
Migut.E00293 Erythranthe guttata HOM05D005816 ORTHO05D006915 1.7e-07 59.7 74 47.3
Lj4g0025770 Lotus japonicus HOM05D005816 ORTHO05D006915 2.2e-07 59.3 58 56.9
Aqoxy3G03898 Aquilegia oxysepala HOM05D005816 ORTHO05D006915 5.0e-07 58.2 118 38.1
Migut.L01100 Erythranthe guttata HOM05D005816 ORTHO05D006915 5.0e-07 58.2 72 50.0
Lj5g0018872 Lotus japonicus HOM05D005816 ORTHO05D006915 5.0e-07 58.2 105 38.1
Lalb_Chr07g0178581 Lupinus albus HOM05D005816 ORTHO05D006915 6.5e-07 57.8 127 40.9
Manes.05G118800 Manihot esculenta HOM05D005816 ORTHO05D006915 6.5e-07 57.8 117 35.0
Dinv36900 Davidia involucrata HOM05D005816 ORTHO05D006915 8.5e-07 57.4 59 52.5
A07p39820 Brassica napus HOM05D005816 ORTHO05D006915 1.1e-06 57.0 50 62.0
BraA07t31528Z Brassica rapa HOM05D005816 ORTHO05D006915 1.1e-06 57.0 50 62.0
FvH4_5g12751 Fragaria vesca HOM05D005816 ORTHO05D006915 1.1e-06 57.0 120 42.5
Medtr8g076990 Medicago truncatula HOM05D005816 ORTHO05D006915 1.1e-06 57.0 70 45.7
Potri.008G115600 Populus trichocarpa HOM05D005816 ORTHO05D006915 1.1e-06 57.0 120 39.2
SalBow8G0077 Salvia bowleyana HOM05D005816 ORTHO05D006915 1.1e-06 57.0 115 37.4
Aa31LG4G4260 Aethionema arabicum HOM05D005816 ORTHO05D006915 1.4e-06 56.6 58 56.9
Thhalv10019753m.g Eutrema salsugineum HOM05D005816 ORTHO05D006915 1.4e-06 56.6 48 62.5
Gohir.D07G042900 Gossypium hirsutum HOM05D005816 ORTHO05D006915 1.4e-06 56.6 117 35.9
HanXRQChr16g0502081 Helianthus annuus HOM05D005816 ORTHO05D006915 1.4e-06 56.6 64 56.2
Oeu044626.1 Olea europaea HOM05D005816 ORTHO05D006915 1.4e-06 56.6 119 37.8
Carub.0002s2074 Capsella rubella HOM05D005816 ORTHO05D006915 1.9e-06 56.2 48 60.4
AT1G73965 Arabidopsis thaliana HOM05D005816 ORTHO05D006915 2.5e-06 55.8 57 56.1
COL.COLO4_22708 Corchorus olitorius HOM05D005816 ORTHO05D006915 2.5e-06 55.8 114 42.1
Gorai.001G045900 Gossypium raimondii HOM05D005816 ORTHO05D006915 2.5e-06 55.8 117 35.9
Prupe.5G216700 Prunus persica HOM05D005816 ORTHO05D006915 2.5e-06 55.8 118 37.3
BcaC08g46825 Brassica carinata HOM05D005816 ORTHO05D006915 3.2e-06 55.5 48 56.2
Sc11g0003040 Simmondsia chinensis HOM05D005816 ORTHO05D006915 3.2e-06 55.5 71 46.5
Atru.chr9.746 Acer truncatum HOM05D005816 ORTHO05D006915 5.5e-06 54.7 60 55.0
AL2G33800 Arabidopsis lyrata HOM05D005816 ORTHO05D006915 5.5e-06 54.7 52 59.6
BolC6t39843H Brassica oleracea HOM05D005816 ORTHO05D006915 5.5e-06 54.7 48 58.3
FAN18G0325 Fragaria x ananassa HOM05D005816 ORTHO05D006915 5.5e-06 54.7 120 43.3
MBI16_g06255_MAGBIO Magnolia biondii HOM05D005816 ORTHO05D006915 5.5e-06 54.7 117 36.8
Oeu024099.1 Olea europaea HOM05D005816 ORTHO05D006915 5.5e-06 54.7 119 37.0
Psat4g043720 Pisum sativum HOM05D005816 ORTHO05D006915 5.5e-06 54.7 115 40.0
TPR.G26768 Trifolium pratense HOM05D005816 ORTHO05D006915 5.5e-06 54.7 125 40.0
Glyma.17G121800 Glycine max HOM05D005816 ORTHO05D006915 7.2e-06 54.3 126 42.9
Gohir.A11G007200 Gossypium hirsutum HOM05D005816 ORTHO05D006915 7.2e-06 54.3 57 57.9
Nn4g23710 Nelumbo nucifera HOM05D005816 ORTHO05D006915 7.2e-06 54.3 126 38.1
PGR044G2006 Punica granatum HOM05D005816 ORTHO05D006915 7.2e-06 54.3 119 38.7
CANSAT64G1761 Cannabis sativa HOM05D005816 ORTHO05D006915 9.4e-06 53.9 29 86.2
Gohir.D11G006300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 9.4e-06 53.9 25 92.0
Gorai.007G007600 Gossypium raimondii HOM05D005816 ORTHO05D006915 9.4e-06 53.9 25 92.0
Potri.012G059600 Populus trichocarpa HOM05D005816 ORTHO05D006915 9.4e-06 53.9 117 35.9


User provided reference genes

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