Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G27600 Arabidopsis lyrata HOM05D007420 ORTHO05D009353 8.3e-35 149.8 76 100.0
Sp5g23780 Schrenkiella parvula HOM05D007420 ORTHO05D009353 8.3e-35 149.8 76 100.0
Thhalv10019233m.g Eutrema salsugineum HOM05D007420 ORTHO05D009353 2.4e-34 148.3 76 98.7
CARHR061490 Cardamine hirsuta HOM05D007420 ORTHO05D009353 9.2e-34 146.4 76 97.4
AT1G68680 Arabidopsis thaliana HOM05D007420 ORTHO05D009353 1.2e-33 146.0 76 97.4
BolC6t38847H Brassica oleracea HOM05D007420 ORTHO05D009353 7.8e-33 143.3 76 94.7
Carub.0002s1522 Capsella rubella HOM05D007420 ORTHO05D009353 1.1e-31 139.4 76 93.4
THA.LOC104809007 Tarenaya hassleriana HOM05D007420 ORTHO05D009353 2.6e-28 128.3 80 82.5
C06p37440 Brassica napus HOM05D007420 ORTHO05D032647 2.2e-27 125.2 69 89.9
BcaB03g15440 Brassica carinata HOM05D007420 ORTHO05D009353 3.7e-27 124.4 67 92.5
BcaC08g45947 Brassica carinata HOM05D007420 ORTHO05D009353 3.7e-27 124.4 67 92.5
BraA07t30816Z Brassica rapa HOM05D007420 ORTHO05D009353 1.4e-26 122.5 66 90.9
A07p31870 Brassica napus HOM05D007420 ORTHO05D009353 3.2e-26 121.3 69 87.0
Phvul.003G161000 Phaseolus vulgaris HOM05D007420 ORTHO05D009353 1.2e-25 119.4 78 76.9
Oeu021594.1 Olea europaea HOM05D007420 ORTHO05D009353 1.6e-25 119.0 77 80.5
CANSAT56G4260 Cannabis sativa HOM05D007420 ORTHO05D009353 2.7e-25 118.2 78 79.5
Atru.chr7.1239 Acer truncatum HOM05D007420 ORTHO05D009353 3.5e-25 117.9 78 78.2
BcaB03g15439 Brassica carinata HOM05D007420 ORTHO05D009353 4.6e-25 117.5 66 92.4
Eucgr.C01109 Eucalyptus grandis HOM05D007420 ORTHO05D009353 4.6e-25 117.5 78 79.5
SalBow1G2150 Salvia bowleyana HOM05D007420 ORTHO05D009353 4.6e-25 117.5 71 83.1
Aa31sc12G90 Aethionema arabicum HOM05D007420 ORTHO05D009353 1.0e-24 116.3 74 79.7
Migut.L01525 Erythranthe guttata HOM05D007420 ORTHO05D009353 3.9e-24 114.4 71 80.3
CiPaw.03G239800 Carya illinoinensis HOM05D007420 ORTHO05D009353 5.0e-24 114.0 78 76.9
Cc06_g08970 Coffea canephora HOM05D007420 ORTHO05D009353 5.0e-24 114.0 73 76.7
Sed0006703 Sechium edule HOM05D007420 ORTHO05D009353 1.9e-23 112.1 77 76.6
ClCG11G002810 Citrullus lanatus HOM05D007420 ORTHO05D009353 4.3e-23 110.9 76 73.7
Eucgr.C01288 Eucalyptus grandis HOM05D007420 ORTHO05D009353 4.3e-23 110.9 66 83.3
Potri.011G024500 Populus trichocarpa HOM05D007420 ORTHO05D009353 4.3e-23 110.9 80 71.2
TPR.G9078 Trifolium pratense HOM05D007420 ORTHO05D009353 5.6e-23 110.5 65 81.5
Lalb_Chr13g0302091 Lupinus albus HOM05D007420 ORTHO05D009353 7.3e-23 110.2 78 73.1
HanXRQChr03g0062071 Helianthus annuus HOM05D007420 ORTHO05D009353 1.2e-22 109.4 77 72.7
CAN.G1424.4 Capsicum annuum HOM05D007420 ORTHO05D009353 2.8e-22 108.2 76 71.1
Manes.06G052500 Manihot esculenta HOM05D007420 ORTHO05D009353 2.8e-22 108.2 78 70.5
ECA240G1805 Erigeron canadensis HOM05D007420 ORTHO05D009353 1.1e-21 106.3 73 71.2
Gohir.A06G058200 Gossypium hirsutum HOM05D007420 ORTHO05D009353 1.1e-21 106.3 78 71.8
Gohir.D06G056500 Gossypium hirsutum HOM05D007420 ORTHO05D009353 1.1e-21 106.3 78 71.8
CsaV3_2G002630 Cucumis sativus L. HOM05D007420 ORTHO05D009353 2.3e-21 105.1 71 73.2
Nn8g39361 Nelumbo nucifera HOM05D007420 ORTHO05D009353 2.3e-21 105.1 78 69.2
Psat4g040560 Pisum sativum HOM05D007420 ORTHO05D009353 6.8e-21 103.6 79 69.6
CDE01G0426 Ceratophyllum demersum HOM05D007420 ORTHO05D009353 8.9e-21 103.2 77 70.1
TWI32G1185 Tripterygium wilfordii HOM05D007420 ORTHO05D009353 8.9e-21 103.2 80 67.5
MD15G1177800 Malus domestica HOM05D007420 ORTHO05D009353 1.5e-20 102.4 74 67.6
PGR102G0502 Punica granatum HOM05D007420 ORTHO05D009353 1.5e-20 102.4 74 64.9
Solyc07g005430.3 Solanum lycopersicum HOM05D007420 ORTHO05D009353 1.5e-20 102.4 63 79.4
CDE03G0079 Ceratophyllum demersum HOM05D007420 ORTHO05D009353 2.6e-20 101.7 77 70.1
Nn2g11931 Nelumbo nucifera HOM05D007420 ORTHO05D009353 3.4e-20 101.3 78 67.9
Sopen07g001360 Solanum pennellii HOM05D007420 ORTHO05D009353 3.4e-20 101.3 63 77.8
TWI34G1269 Tripterygium wilfordii HOM05D007420 ORTHO05D009353 3.4e-20 101.3 80 67.5
Glyma.05G010400 Glycine max HOM05D007420 ORTHO05D009353 5.8e-20 100.5 68 76.5
Haze_25622 Corylus avellana HOM05D007420 ORTHO05D009353 2.2e-19 98.6 71 71.8
RcHm_v2.0_Chr2g0089401 Rosa chinensis HOM05D007420 ORTHO05D009353 2.9e-19 98.2 77 66.2
Actinidia22015 Actinidia chinensis HOM05D007420 ORTHO05D009353 3.7e-19 97.8 68 70.6
EL10Ac8g18588 Beta vulgaris HOM05D007420 ORTHO05D009353 3.7e-19 97.8 77 66.2
Eucgr.C01298 Eucalyptus grandis HOM05D007420 ORTHO05D009353 3.7e-19 97.8 68 76.5
Eucgr.L02717 Eucalyptus grandis HOM05D007420 ORTHO05D009353 3.7e-19 97.8 68 76.5
QL02p087339 Quercus lobata HOM05D007420 ORTHO05D009353 4.9e-19 97.4 69 73.9
arahy.Tifrunner.gnm1.ann1.QR7ILI Arachis hypogaea HOM05D007420 ORTHO05D009353 6.4e-19 97.1 64 78.1
arahy.Tifrunner.gnm1.ann1.XPL4AE Arachis hypogaea HOM05D007420 ORTHO05D009353 6.4e-19 97.1 64 78.1
PSO170G5167 Papaver somniferum HOM05D007420 ORTHO05D009353 8.3e-19 96.7 61 73.8
Duzib150G1214 Durio zibethinus HOM05D007420 ORTHO05D009353 2.4e-18 95.1 59 78.0
CSS0016223 Camellia sinensis var. sinensis HOM05D007420 ORTHO05D009353 5.4e-18 94.0 68 69.1
Cfa003340 Carpinus fangiana HOM05D007420 ORTHO05D009353 5.4e-18 94.0 68 73.5
Hma1.2p1_0018F.1_g012820 Hydrangea macrophylla HOM05D007420 ORTHO05D009353 5.4e-18 94.0 67 70.1
GSVIVG01015481001 Vitis vinifera HOM05D007420 ORTHO05D009353 5.4e-18 94.0 78 62.8
unitig_85.g27256 Utricularia gibba HOM05D000953 ORTHO05D000231 1.6e-17 92.4 54 83.3
Peaxi162Scf00361g00611 Petunia axillaris HOM05D007420 ORTHO05D009353 2.7e-17 91.7 66 69.7
SalBow6G6280 Salvia bowleyana HOM05D007420 ORTHO05D009353 3.5e-17 91.3 63 76.2
Gorai.010G066200 Gossypium raimondii HOM05D007420 ORTHO05D009353 6.0e-17 90.5 72 68.1
Ciclev10009973m.g Citrus clementina HOM05D007420 ORTHO05D009353 7.8e-17 90.1 72 65.3
Lj4g0001906 Lotus japonicus HOM05D007420 ORTHO05D009353 7.8e-17 90.1 67 68.7
FvH4_1g03930 Fragaria vesca HOM05D007420 ORTHO05D009353 1.0e-16 89.7 72 63.9
Thecc.09G120400 Theobroma cacao HOM05D007420 ORTHO05D009353 1.0e-16 89.7 68 70.6
Pp3c11_6600 Physcomitrium patens HOM05D007420 ORTHO05D009353 1.3e-16 89.4 63 66.7
Nitab4.5_0000750g0050 Nicotiana tabacum HOM05D007420 ORTHO05D009353 1.7e-16 89.0 66 66.7
Nitab4.5_0001193g0010 Nicotiana tabacum HOM05D007420 ORTHO05D009353 1.7e-16 89.0 66 66.7
Hma1.2p1_0018F.1_g012830 Hydrangea macrophylla HOM05D007420 ORTHO05D009353 3.0e-16 88.2 58 70.7
DCAR_014860 Daucus carota HOM05D007420 ORTHO05D009353 3.9e-16 87.8 68 67.6
Sc14g0000270 Simmondsia chinensis HOM05D007420 ORTHO05D009353 5.1e-16 87.4 74 63.5
Dinv36572 Davidia involucrata HOM05D007420 ORTHO05D009353 6.6e-16 87.0 72 62.5
MELO3C004528.2 Cucumis melo HOM05D007420 ORTHO05D009353 1.1e-15 86.3 61 68.9
Prupe.7G237700 Prunus persica HOM05D007420 ORTHO05D009353 1.1e-15 86.3 66 68.2
Hund09157 Selenicereus undatus HOM05D007420 ORTHO05D009353 1.5e-15 85.9 68 70.6
Zm00001eb283090 Zea mays HOM05D007420 ORTHO05D009353 4.3e-15 84.3 57 68.4
Sabra11G0015300 Salix brachista HOM05D007420 ORTHO05D009353 5.6e-15 84.0 70 67.1
HPP92_024085 Vanilla planifolia HOM05D007420 ORTHO05D009353 5.6e-15 84.0 68 67.6
Mapoly0048s0106 Marchantia polymorpha HOM05D007420 ORTHO05D009353 7.3e-15 83.6 58 69.0
AagrBONN_evm.TU.Sc2ySwM_362.2614 Anthoceros agrestis HOM05D007420 ORTHO05D009353 9.5e-15 83.2 63 65.1
FAN22G2307 Fragaria x ananassa HOM05D022909 ORTHO05D009353 1.2e-14 82.8 67 67.2
FAN23G1905 Fragaria x ananassa HOM05D007420 ORTHO05D009353 1.2e-14 82.8 67 67.2
FAN26G1322 Fragaria x ananassa HOM05D007420 ORTHO05D009353 1.2e-14 82.8 67 67.2
FAN28G1248 Fragaria x ananassa HOM05D007420 ORTHO05D009353 1.2e-14 82.8 67 67.2
vmacro20648 Vaccinium macrocarpon HOM05D007420 ORTHO05D009353 1.6e-14 82.4 68 64.7
AUR62033448 Chenopodium quinoa HOM05D007420 ORTHO05D009353 2.1e-14 82.0 70 62.9
MD02G1037600 Malus domestica HOM05D007420 ORTHO05D009353 4.7e-14 80.9 63 61.9
SEGI_24866 Sequoiadendron giganteum HOM05D007420 ORTHO05D009353 1.1e-13 79.7 68 61.8
FAN19G3121 Fragaria x ananassa HOM05D007420 ORTHO05D009353 4.0e-13 77.8 55 69.1
SHI28897 Sapria himalayana HOM05D007420 ORTHO05D009353 5.2e-13 77.4 68 58.8
CBR_g3296 Chara braunii HOM05D007420 ORTHO05D009353 9.9e-12 73.2 74 50.0
PGSC0003DMG401011174 Solanum tuberosum HOM05D007420 ORTHO05D009353 9.9e-12 73.2 85 52.9
Os05g0176600 Oryza sativa ssp. japonica HOM05D007420 ORTHO05D009353 7.1e-10 67.0 43 76.7
MBI01_g34140_MAGBIO Magnolia biondii HOM05D007420 ORTHO05D009353 7.8e-09 63.5 43 67.4
Glyma.13G033951 Glycine max HOM05D007420 ORTHO05D009353 1.0e-08 63.2 37 78.4
MCO15G341 Micromonas commoda HOM05D007420 ORTHO05D009353 1.5e-07 59.3 61 47.5
BcaB03g15444 Brassica carinata HOM05D007420 ORTHO05D009353 9.6e-07 56.6 34 88.2
Eucgr.C01292 Eucalyptus grandis HOM05D007420 ORTHO05D009353 4.7e-06 54.3 30 86.7


User provided reference genes

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