Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g23430 Schrenkiella parvula HOM05D009767 ORTHO05D011871 0.0e+00 1160.6 627 100.0
AT1G68210 Arabidopsis thaliana HOM05D009767 ORTHO05D011871 1.2e-94 351.7 791 35.8
Sp5g23230 Schrenkiella parvula HOM05D009767 ORTHO05D011871 1.5e-92 344.7 693 37.1
Sp3g29620 Schrenkiella parvula HOM05D009767 ORTHO05D011871 9.4e-92 342.0 372 52.7
A07p34820 Brassica napus HOM05D009767 ORTHO05D011871 1.0e-90 338.6 618 39.6
BraA07t31100Z Brassica rapa HOM05D009767 ORTHO05D011871 1.0e-90 338.6 618 39.6
BcaB03g15809 Brassica carinata HOM05D009767 ORTHO05D011871 1.5e-89 334.7 645 37.2
C06p41550 Brassica napus HOM05D009767 ORTHO05D011871 2.0e-89 334.3 618 39.5
BolC6t39269H Brassica oleracea HOM05D009767 ORTHO05D011871 2.0e-89 334.3 618 39.5
AL2G27050 Arabidopsis lyrata HOM05D009767 ORTHO05D011871 2.2e-88 330.9 671 37.3
BcaC08g46284 Brassica carinata HOM05D009767 ORTHO05D011871 8.8e-82 308.9 629 36.7
Thhalv10019799m.g Eutrema salsugineum HOM05D009767 ORTHO05D011871 1.5e-76 291.6 833 34.0
Thhalv10019755m.g Eutrema salsugineum HOM05D009767 ORTHO05D011871 8.8e-74 282.3 835 33.9
BcaC08g46288 Brassica carinata HOM05D009767 ORTHO05D011871 4.9e-72 276.6 630 35.6
Thhalv10019466m.g Eutrema salsugineum HOM05D009767 ORTHO05D011871 4.1e-71 273.5 780 32.8
Carub.0002s1470 Capsella rubella HOM05D009767 ORTHO05D011871 1.5e-65 255.0 695 31.9
C06p41560 Brassica napus HOM05D009767 ORTHO05D011871 8.1e-51 206.1 259 49.0
BolC6t39268H Brassica oleracea HOM05D009767 ORTHO05D011871 8.1e-51 206.1 259 49.0
A07p34810 Brassica napus HOM05D009767 ORTHO05D011871 4.0e-50 203.8 259 49.0
BraA07t31099Z Brassica rapa HOM05D009767 ORTHO05D011871 4.4e-49 200.3 254 49.6
C06p41790 Brassica napus HOM05D009767 ORTHO05D011871 4.9e-48 196.8 638 31.2
BolC6t39249H Brassica oleracea HOM05D009767 ORTHO05D011871 4.9e-48 196.8 638 31.2
BraA07t31084Z Brassica rapa HOM05D009767 ORTHO05D011871 6.4e-48 196.4 645 30.7
BcaC08g46251 Brassica carinata HOM05D009767 ORTHO05D011871 1.5e-44 185.3 663 30.0
BcaB03g15114 Brassica carinata HOM05D009767 ORTHO05D011871 3.4e-41 174.1 637 30.8
A07p34660 Brassica napus HOM05D009767 ORTHO05D011871 2.5e-28 131.3 665 26.2
Haze_00664 Corylus avellana HOM05D000196 ORTHO05D000279 2.2e-16 91.7 402 26.6
THA.LOC104801671 Tarenaya hassleriana HOM05D000196 ORTHO05D011871 1.4e-15 89.0 286 29.0
Cfa015826 Carpinus fangiana HOM05D000196 ORTHO05D015043 2.4e-15 88.2 298 28.2
Prupe.1G317900 Prunus persica HOM05D000196 ORTHO05D015043 6.0e-14 83.6 251 30.7
ClCG01G005950 Citrullus lanatus HOM05D000196 ORTHO05D000279 2.3e-13 81.6 145 37.2
Manes.06G064200 Manihot esculenta HOM05D000196 ORTHO05D000279 1.5e-12 79.0 240 30.4
FAN07G0195 Fragaria x ananassa HOM05D000196 ORTHO05D015043 2.1e-11 75.1 266 30.5
MD16G1036100 Malus domestica HOM05D000196 ORTHO05D015043 2.8e-11 74.7 263 28.9
Dinv17522 Davidia involucrata HOM05D000196 ORTHO05D010161 3.7e-11 74.3 253 27.3
Duzib248G1184 Durio zibethinus HOM05D000196 ORTHO05D000279 4.8e-11 73.9 276 26.1
FvH4_4g26570 Fragaria vesca HOM05D000196 ORTHO05D015043 4.8e-11 73.9 274 31.0
FAN22G0213 Fragaria x ananassa HOM05D000196 ORTHO05D015043 1.1e-10 72.8 122 41.8
Actinidia17114 Actinidia chinensis HOM05D000196 ORTHO05D010161 1.4e-10 72.4 237 27.0
FAN17G0292 Fragaria x ananassa HOM05D000196 ORTHO05D015043 1.4e-10 72.4 274 30.3
Glyma.10G269601 Glycine max HOM05D000196 ORTHO05D000279 9.0e-10 69.7 161 33.5
Dinv16150 Davidia involucrata HOM05D000196 ORTHO05D000279 2.0e-09 68.6 129 33.3
Thecc.02G220000 Theobroma cacao HOM05D000196 ORTHO05D013060 2.0e-09 68.6 284 26.4
SalBow8G0367 Salvia bowleyana HOM05D000196 ORTHO05D000279 2.6e-09 68.2 158 34.2
PGSC0003DMG400047331 Solanum tuberosum HOM05D000196 ORTHO05D010161 7.6e-09 66.6 237 25.7
FAN12G2710 Fragaria x ananassa HOM05D000196 ORTHO05D015043 1.0e-08 66.2 137 38.0
FAN12G3607 Fragaria x ananassa HOM05D000196 ORTHO05D015043 1.0e-08 66.2 137 38.0
Migut.L01006 Erythranthe guttata HOM05D000196 ORTHO05D000279 1.3e-08 65.9 132 30.3
VMungo0720G2014 Vigna mungo HOM05D000196 ORTHO05D000279 2.9e-08 64.7 263 27.4
CAN.G661.3 Capsicum annuum HOM05D000196 ORTHO05D000279 3.8e-08 64.3 293 27.0
Actinidia16023 Actinidia chinensis HOM05D000196 ORTHO05D000279 1.4e-07 62.4 107 34.6
Solyc07g009110.3 Solanum lycopersicum HOM05D000196 ORTHO05D010161 1.4e-07 62.4 217 29.5
CsaV3_5G028750 Cucumis sativus L. HOM05D000196 ORTHO05D020475 9.3e-07 59.7 118 38.1
vmacro01408 Vaccinium macrocarpon HOM05D000196 ORTHO05D000279 9.3e-07 59.7 251 27.5
CiPaw.15G173300 Carya illinoinensis HOM05D000196 ORTHO05D000279 1.2e-06 59.3 142 31.0
MELO3C005336.2 Cucumis melo HOM05D000196 ORTHO05D020475 1.2e-06 59.3 146 32.2
Peaxi162Scf00000g51014 Petunia axillaris HOM05D000196 ORTHO05D010161 1.2e-06 59.3 133 36.8
Pp3c23_7400 Physcomitrium patens HOM05D000196 ORTHO05D000279 1.2e-06 59.3 253 22.9
Hund06054 Selenicereus undatus HOM05D000196 ORTHO05D000279 1.2e-06 59.3 243 23.5
CDE04G2901 Ceratophyllum demersum HOM05D000196 ORTHO05D000279 1.6e-06 58.9 234 25.2
CsaV3_2G025170 Cucumis sativus L. HOM05D000196 ORTHO05D000279 1.6e-06 58.9 232 25.9
Gohir.A08G251200 Gossypium hirsutum HOM05D000196 ORTHO05D000279 1.6e-06 58.9 255 23.9
CiPaw.16G115500 Carya illinoinensis HOM05D000196 ORTHO05D000279 2.1e-06 58.5 142 28.2
Pp3c8_21000 Physcomitrium patens HOM05D000196 ORTHO05D000279 2.1e-06 58.5 251 23.1
Sc23g0006470 Simmondsia chinensis HOM05D000196 ORTHO05D000279 2.1e-06 58.5 241 26.1
Lj5g0024540 Lotus japonicus HOM05D000196 ORTHO05D000279 2.7e-06 58.2 118 29.7
Nitab4.5_0003715g0030 Nicotiana tabacum HOM05D000196 ORTHO05D015722 2.7e-06 58.2 273 26.7
PGSC0003DMG400035052 Solanum tuberosum HOM05D022087 ORTHO05D015722 2.7e-06 58.2 251 27.5
Duzib187G1639 Durio zibethinus HOM05D000196 ORTHO05D000279 3.5e-06 57.8 141 29.1
Lj5g0006545 Lotus japonicus HOM05D000196 ORTHO05D000279 3.5e-06 57.8 118 29.7
ClCG11G003560 Citrullus lanatus HOM05D000196 ORTHO05D000279 4.6e-06 57.4 118 31.4
TAR629G3003 Trochodendron aralioides HOM05D000196 ORTHO05D000279 4.6e-06 57.4 234 21.8
MELO3C004489.2 Cucumis melo HOM05D000196 ORTHO05D000279 6.0e-06 57.0 140 28.6
CsaV3_2G003430 Cucumis sativus L. HOM05D000196 ORTHO05D000279 6.0e-06 57.0 140 28.6
Gohir.A05G050900 Gossypium hirsutum HOM05D000196 ORTHO05D000279 6.0e-06 57.0 244 23.4
Gohir.D05G052500 Gossypium hirsutum HOM05D000196 ORTHO05D000279 6.0e-06 57.0 244 23.4
Gorai.009G054200 Gossypium raimondii HOM05D000196 ORTHO05D000279 6.0e-06 57.0 244 23.4
THA.LOC104823648 Tarenaya hassleriana HOM05D000196 ORTHO05D000279 6.0e-06 57.0 266 22.9
SGA_v2.0_scaffold36G14567 Striga asiatica HOM05D000196 ORTHO05D000279 7.9e-06 56.6 260 23.5


User provided reference genes

Program Settings