Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g23400 Schrenkiella parvula HOM05D007903 ORTHO05D009925 5.5e-84 314.3 163 100.0
Thhalv10019802m.g Eutrema salsugineum HOM05D007903 ORTHO05D009925 1.1e-65 253.4 169 79.9
BcaB03g15412 Brassica carinata HOM05D007903 ORTHO05D009925 3.8e-61 238.4 164 76.8
BcaB05g24366 Brassica carinata HOM05D007903 ORTHO05D009925 2.5e-60 235.7 163 79.1
BcaC08g45975 Brassica carinata HOM05D007903 ORTHO05D009925 4.2e-60 235.0 164 76.8
C06p37650 Brassica napus HOM05D007903 ORTHO05D009925 4.2e-60 235.0 164 76.8
BolC6t38868H Brassica oleracea HOM05D007903 ORTHO05D009925 4.2e-60 235.0 164 76.8
BraA02t06557Z Brassica rapa HOM05D007903 ORTHO05D009925 3.3e-57 225.3 165 73.3
CARHR061060 Cardamine hirsuta HOM05D007903 ORTHO05D009925 7.7e-54 214.2 166 74.7
AL2G27200 Arabidopsis lyrata HOM05D007903 ORTHO05D009925 1.3e-53 213.4 166 73.5
AT1G68350 Arabidopsis thaliana HOM05D007903 ORTHO05D009925 2.2e-53 212.6 166 74.7
Carub.0002s1485 Capsella rubella HOM05D007903 ORTHO05D009925 3.8e-53 211.8 166 73.5
THA.LOC104821918 Tarenaya hassleriana HOM05D007903 ORTHO05D009925 4.7e-27 125.2 165 47.3
Hma1.2p1_1875F.1_g306260 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 2.9e-21 105.9 164 40.2
CSS0015489 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 1.1e-20 104.0 162 42.0
CiPaw.05G239700 Carya illinoinensis HOM05D007903 ORTHO05D009925 1.9e-20 103.2 160 38.8
Haze_00633 Corylus avellana HOM05D007903 ORTHO05D009925 7.3e-20 101.3 169 39.1
C06p38420 Brassica napus HOM05D000305 ORTHO05D000065 1.6e-19 100.1 85 71.8
BolC6t38941H Brassica oleracea HOM05D000305 ORTHO05D000065 1.6e-19 100.1 85 71.8
Cfa015866 Carpinus fangiana HOM05D007903 ORTHO05D009925 2.1e-19 99.8 169 38.5
Potri.010G122600 Populus trichocarpa HOM05D007903 ORTHO05D009925 9.8e-17 90.9 163 38.7
Hma1.2p1_2787F.1_g328510 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 1.3e-16 90.5 140 39.3
Ciclev10017603m.g Citrus clementina HOM05D007903 ORTHO05D009925 8.3e-16 87.8 170 38.8
QL01p040711 Quercus lobata HOM05D007903 ORTHO05D009925 8.3e-16 87.8 140 40.7
Potri.008G122700 Populus trichocarpa HOM05D007903 ORTHO05D009925 2.4e-15 86.3 164 37.2
TAR374G1449 Trochodendron aralioides HOM05D007903 ORTHO05D009925 5.4e-15 85.1 168 36.9
MD13G1039400 Malus domestica HOM05D007903 ORTHO05D009925 7.0e-15 84.7 170 34.7
MD16G1040300 Malus domestica HOM05D007903 ORTHO05D009925 9.2e-15 84.3 171 34.5
DCAR_030171 Daucus carota HOM05D007903 ORTHO05D009925 1.2e-14 84.0 167 34.1
Cpa.g.sc65.47 Carica papaya HOM05D007903 ORTHO05D009925 2.0e-14 83.2 165 38.2
A02p14900 Brassica napus HOM05D007903 ORTHO05D009925 3.5e-14 82.4 52 75.0
Sabra10G0092700 Salix brachista HOM05D007903 ORTHO05D009925 3.5e-14 82.4 163 36.2
PGSC0003DMG400006002 Solanum tuberosum HOM05D007903 ORTHO05D009925 8.6e-13 77.8 173 34.1
Prupe.1G313800 Prunus persica HOM05D007903 ORTHO05D009925 1.1e-12 77.4 164 36.0
RcHm_v2.0_Chr4g0434841 Rosa chinensis HOM05D007903 ORTHO05D009925 1.1e-12 77.4 176 34.7
Nn4g23903 Nelumbo nucifera HOM05D007903 ORTHO05D009925 1.5e-12 77.0 177 35.6
Manes.14G104700 Manihot esculenta HOM05D007903 ORTHO05D009925 1.9e-12 76.6 164 37.8
TWI31G0067 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 2.5e-12 76.3 168 33.9
Oeu057730.1 Olea europaea HOM05D007903 ORTHO05D009925 9.5e-12 74.3 156 37.8
PGR119G1971 Punica granatum HOM05D007903 ORTHO05D009925 2.8e-11 72.8 165 37.0
Aqoxy3G00252 Aquilegia oxysepala HOM05D007903 ORTHO05D009925 3.6e-11 72.4 172 35.5
CSS0009081 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 4.7e-11 72.0 157 33.8
Sabra08G0093200 Salix brachista HOM05D007903 ORTHO05D009925 6.2e-11 71.6 154 35.1
Lalb_Chr06g0165971 Lupinus albus HOM05D007903 ORTHO05D009925 8.0e-11 71.2 165 35.8
Thecc.02G225400 Theobroma cacao HOM05D007903 ORTHO05D009925 1.8e-10 70.1 171 32.7
CAN.G25.18 Capsicum annuum HOM05D007903 ORTHO05D009925 2.3e-10 69.7 172 31.4
CANSAT01G0431 Cannabis sativa HOM05D007903 ORTHO05D009925 2.0e-09 66.6 175 32.0
FvH4_4g27040 Fragaria vesca HOM05D007903 ORTHO05D009925 2.0e-09 66.6 174 28.7
FAN12G1984 Fragaria x ananassa HOM05D007903 ORTHO05D009925 2.0e-09 66.6 174 28.7
FAN07G0160 Fragaria x ananassa HOM05D007903 ORTHO05D009925 2.6e-09 66.2 171 29.8
FAN12G2568 Fragaria x ananassa HOM05D007903 ORTHO05D009925 2.6e-09 66.2 160 30.6
Solyc04g007360.1 Solanum lycopersicum HOM05D007903 ORTHO05D009925 4.4e-09 65.5 172 30.2
FAN17G2767 Fragaria x ananassa HOM05D007903 ORTHO05D009925 5.8e-09 65.1 172 29.1
FAN22G0942 Fragaria x ananassa HOM05D007903 ORTHO05D009925 5.8e-09 65.1 172 29.1
Peaxi162Scf00564g00039 Petunia axillaris HOM05D007903 ORTHO05D009925 5.8e-09 65.1 136 33.8
Sc04g0006190 Simmondsia chinensis HOM05D007903 ORTHO05D009925 7.5e-09 64.7 165 31.5
CSS0036148 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 1.3e-08 63.9 157 32.5
Duzib268G0450 Durio zibethinus HOM05D007903 ORTHO05D009925 1.3e-08 63.9 169 34.9
CsaV3_5G034450 Cucumis sativus L. HOM05D007903 ORTHO05D009925 1.7e-08 63.5 140 36.4
Sopen04g002420 Solanum pennellii HOM05D007903 ORTHO05D009925 2.9e-08 62.8 135 32.6
Gohir.A09G042700 Gossypium hirsutum HOM05D007903 ORTHO05D009925 3.7e-08 62.4 176 34.1
Gohir.D09G043400 Gossypium hirsutum HOM05D007903 ORTHO05D009925 6.4e-08 61.6 170 33.5
Gorai.006G050300 Gossypium raimondii HOM05D007903 ORTHO05D009925 6.4e-08 61.6 170 33.5
ClCG05G022570 Citrullus lanatus HOM05D007903 ORTHO05D009925 1.1e-07 60.8 137 36.5
Sed0015064 Sechium edule HOM05D007903 ORTHO05D009925 5.4e-07 58.5 159 33.3
Lj5g0001705 Lotus japonicus HOM05D007903 ORTHO05D009925 1.6e-06 57.0 171 32.7
Eucgr.G02306 Eucalyptus grandis HOM05D007903 ORTHO05D009925 2.1e-06 56.6 172 32.6
Migut.E00359 Erythranthe guttata HOM05D007903 ORTHO05D009925 3.5e-06 55.8 162 31.5


User provided reference genes

Program Settings