Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 1.1e-125 453.4 231 100.0
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 7.4e-119 430.6 228 96.1
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 3.1e-117 425.2 231 95.2
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 3.1e-117 425.2 231 95.2
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 2.6e-116 422.2 228 95.2
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 5.9e-116 421.0 231 94.4
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 5.9e-116 421.0 231 94.4
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 1.3e-115 419.9 229 95.2
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 1.3e-115 419.9 229 95.2
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 1.6e-113 412.9 230 92.2
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 3.6e-113 411.8 230 91.7
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 7.9e-113 410.6 230 90.9
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 6.7e-112 407.5 258 84.9
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 7.4e-111 404.1 234 89.7
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 2.5e-106 389.0 231 87.4
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 2.8e-94 349.0 233 79.0
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 1.7e-91 339.7 235 74.0
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 3.8e-91 338.6 234 76.5
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 2.7e-89 332.4 232 74.1
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 1.0e-88 330.5 227 76.7
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 1.0e-88 330.5 230 74.8
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 2.3e-88 329.3 237 75.1
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 5.2e-88 328.2 230 74.3
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 6.8e-88 327.8 230 72.6
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 6.8e-88 327.8 224 75.4
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 2.0e-87 326.2 229 74.2
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 2.0e-87 326.2 235 73.2
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 3.4e-87 325.5 232 74.1
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 3.4e-87 325.5 230 72.6
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 4.4e-87 325.1 226 75.2
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 4.4e-87 325.1 236 72.5
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 4.4e-87 325.1 229 72.9
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 5.7e-87 324.7 232 73.7
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 7.5e-87 324.3 232 71.6
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 7.5e-87 324.3 228 72.4
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 9.8e-87 323.9 232 72.4
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 1.7e-86 323.2 230 73.5
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 3.7e-86 322.0 226 74.8
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 1.8e-85 319.7 229 72.1
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 2.4e-85 319.3 229 71.6
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 2.4e-85 319.3 229 71.6
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 3.1e-85 318.9 232 71.6
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 4.1e-85 318.5 222 70.3
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 7.0e-85 317.8 238 73.9
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 1.2e-84 317.0 231 71.9
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 1.6e-84 316.6 231 72.3
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 2.7e-84 315.8 231 69.3
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 3.5e-84 315.5 225 72.0
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 7.7e-84 314.3 231 72.3
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 1.7e-83 313.2 234 70.1
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 2.3e-83 312.8 236 71.2
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 2.9e-83 312.4 231 72.3
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 1.5e-82 310.1 235 70.2
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 1.9e-82 309.7 234 69.7
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 5.5e-82 308.1 233 71.2
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 5.5e-82 308.1 227 72.2
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 1.2e-81 307.0 232 71.1
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 1.2e-81 307.0 232 69.0
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 1.6e-81 306.6 221 72.4
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 4.7e-81 305.1 226 69.5
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 4.0e-80 302.0 230 67.0
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 8.9e-80 300.8 183 80.9
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 1.2e-79 300.4 230 66.5
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 4.4e-79 298.5 231 68.8
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 9.8e-79 297.4 232 66.4
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 4.9e-78 295.0 232 66.4
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 1.4e-77 293.5 230 67.0
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 2.4e-77 292.7 232 67.7
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 3.1e-77 292.4 202 76.2
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 4.1e-77 292.0 238 69.7
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 1.3e-75 287.0 237 65.8
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 5.0e-75 285.0 207 69.1
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 1.5e-74 283.5 238 68.1
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 7.3e-74 281.2 237 65.0
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 8.0e-73 277.7 221 64.3
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 1.8e-72 276.6 224 64.3
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 3.0e-72 275.8 239 64.4
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 2.6e-71 272.7 229 64.6
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 7.5e-71 271.2 233 62.2
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 4.9e-70 268.5 232 62.1
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 3.2e-69 265.8 241 59.8
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 3.2e-69 265.8 233 61.4
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 1.6e-68 263.5 225 63.1
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 2.7e-68 262.7 174 74.1
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 6.2e-65 251.5 223 59.6
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 1.1e-64 250.8 234 58.5
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 4.9e-62 241.9 231 59.7
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 4.9e-62 241.9 229 59.4
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 8.3e-62 241.1 229 59.0
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 1.1e-61 240.7 227 55.1
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 2.7e-60 236.1 165 70.9
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 4.6e-60 235.3 236 57.2
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 3.9e-59 232.3 184 66.3
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 5.6e-58 228.4 128 94.5
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 5.6e-58 228.4 142 78.2
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 2.3e-56 223.0 139 79.1
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 1.5e-55 220.3 142 76.8
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 1.4e-53 213.8 139 76.3
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 1.5e-47 193.7 231 52.8
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 3.4e-47 192.6 136 73.5
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 2.3e-43 179.9 95 86.3
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 5.1e-43 178.7 197 49.2
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 7.3e-42 174.9 193 47.2
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 2.8e-41 172.9 190 51.6
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 3.6e-41 172.6 223 49.3
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 1.3e-38 164.1 185 45.4
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 4.2e-37 159.1 140 64.3
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 4.6e-36 155.6 132 62.9
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 4.3e-34 149.1 177 42.9
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 6.4e-30 135.2 159 45.3
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 9.6e-26 121.3 232 38.8
ClCG08G017440 Citrullus lanatus HOM05D001304 ORTHO05D008890 3.1e-24 116.3 90 68.9
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 1.5e-18 97.4 57 86.0
vmacro16147 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 2.4e-16 90.1 93 58.1
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 1.8e-11 73.9 142 26.1
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 5.1e-11 72.4 174 26.4
Ah.03g133980 Amaranthus hybridus HOM05D007778 ORTHO05D009819 3.7e-09 66.2 232 28.0


User provided reference genes

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