Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g22550 Schrenkiella parvula HOM05D010720 ORTHO05D009355 1.3e-126 456.4 247 100.0
Thhalv10019017m.g Eutrema salsugineum HOM05D010720 ORTHO05D009355 3.7e-92 342.0 220 80.9
AL2G26210 Arabidopsis lyrata HOM05D010720 ORTHO05D009355 1.2e-87 327.0 220 79.1
AT1G67540 Arabidopsis thaliana HOM05D010720 ORTHO05D009355 4.5e-82 308.5 220 73.6
BcaB05g24293 Brassica carinata HOM05D010720 ORTHO05D009355 1.0e-81 307.4 222 72.1
BcaC03g14845 Brassica carinata HOM05D010720 ORTHO05D009355 1.0e-81 307.4 222 73.0
C02p23110 Brassica napus HOM05D010720 ORTHO05D009355 2.3e-81 306.2 222 73.0
BolC2t08453H Brassica oleracea HOM05D010720 ORTHO05D009355 2.3e-81 306.2 222 72.5
A02p14300 Brassica napus HOM05D010720 ORTHO05D009355 6.6e-81 304.7 222 72.5
BraA02t06491Z Brassica rapa HOM05D010720 ORTHO05D009355 6.6e-81 304.7 222 72.5
Carub.0002s1388 Capsella rubella HOM05D010720 ORTHO05D009355 5.5e-80 301.6 220 72.3
BcaNung05070 Brassica carinata HOM05D010720 ORTHO05D009355 2.8e-79 299.3 224 70.5
A07p34090 Brassica napus HOM05D010720 ORTHO05D009355 8.9e-78 294.3 224 72.8
C06p42700 Brassica napus HOM05D010720 ORTHO05D009355 9.8e-77 290.8 224 74.6
BolC6t39169H Brassica oleracea HOM05D010720 ORTHO05D009355 9.8e-77 290.8 224 74.6
BraA07t31035Z Brassica rapa HOM05D010720 ORTHO05D009355 6.3e-76 288.1 224 73.2
CARHR060110 Cardamine hirsuta HOM05D010720 ORTHO05D009355 4.1e-75 285.4 222 73.9
BcaB03g15187 Brassica carinata HOM05D010720 ORTHO05D009355 6.6e-73 278.1 224 71.4
Aa31sc48G30 Aethionema arabicum HOM05D010720 ORTHO05D009355 1.1e-67 260.8 221 63.3
THA.LOC104807888 Tarenaya hassleriana HOM05D010720 ORTHO05D009355 2.2e-44 183.3 214 50.5
Hma1.2p1_1239F.1_g269420 Hydrangea macrophylla HOM05D007857 ORTHO05D009355 4.3e-16 89.4 136 38.2
Eucgr.H04657 Eucalyptus grandis HOM05D007857 ORTHO05D009355 7.4e-16 88.6 261 27.2
Lalb_Chr07g0187361 Lupinus albus HOM05D007857 ORTHO05D009355 9.6e-16 88.2 263 27.4
Actinidia20693 Actinidia chinensis HOM05D007857 ORTHO05D009355 2.1e-15 87.0 99 47.5
COL.COLO4_20347 Corchorus olitorius HOM05D007857 ORTHO05D009355 2.1e-15 87.0 244 30.7
CSS0005757 Camellia sinensis var. sinensis HOM05D007857 ORTHO05D009355 2.8e-15 86.7 253 32.0
Glyma.05G146200 Glycine max HOM05D007857 ORTHO05D009355 2.8e-15 86.7 128 37.5
Dinv10979 Davidia involucrata HOM05D007857 ORTHO05D009355 6.3e-15 85.5 241 27.0
Oeu020304.1 Olea europaea HOM05D001334 ORTHO05D001119 6.3e-15 85.5 107 43.0
Dinv14814 Davidia involucrata HOM05D007857 ORTHO05D009355 8.2e-15 85.1 99 41.4
Solyc04g045390.1 Solanum lycopersicum HOM05D007857 ORTHO05D009355 4.1e-14 82.8 126 34.9
Prupe.1G231500 Prunus persica HOM05D007857 ORTHO05D009355 5.3e-14 82.4 225 30.2
RcHm_v2.0_Chr4g0430861 Rosa chinensis HOM05D007857 ORTHO05D009355 6.9e-14 82.0 119 40.3
MD13G1115600 Malus domestica HOM05D007857 ORTHO05D009355 1.2e-13 81.3 239 27.6
PSO063G0898 Papaver somniferum HOM05D007857 ORTHO05D009355 1.2e-13 81.3 101 42.6
PGSC0003DMG400017971 Solanum tuberosum HOM05D007857 ORTHO05D009355 1.5e-13 80.9 158 35.4
Potri.008G177300 Populus trichocarpa HOM05D007857 ORTHO05D009355 2.0e-13 80.5 138 37.0
MD16G1115600 Malus domestica HOM05D007857 ORTHO05D009355 4.5e-13 79.3 101 45.5
PSO782G1056 Papaver somniferum HOM05D007857 ORTHO05D009355 4.5e-13 79.3 101 41.6
Sabra10G0047600 Salix brachista HOM05D007857 ORTHO05D009355 4.5e-13 79.3 147 37.4
TWI75G0924 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 4.5e-13 79.3 255 29.8
QL03p054319 Quercus lobata HOM05D007857 ORTHO05D009355 5.9e-13 79.0 237 27.0
Phvul.002G175100 Phaseolus vulgaris HOM05D007857 ORTHO05D009355 1.0e-12 78.2 207 30.0
Thecc.02G276200 Theobroma cacao HOM05D007857 ORTHO05D009355 1.0e-12 78.2 130 37.7
TWI36G0032 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.0e-12 78.2 131 35.1
TWI36G1497 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.0e-12 78.2 131 35.1
Lj4g0021592 Lotus japonicus HOM05D007857 ORTHO05D009355 2.2e-12 77.0 279 26.5
TAR374G0584 Trochodendron aralioides HOM05D007857 ORTHO05D009355 2.2e-12 77.0 265 28.3
Rhsim12G0103100 Rhododendron simsii HOM05D007857 ORTHO05D009355 2.9e-12 76.6 99 43.4
DCAR_031188 Daucus carota HOM05D007857 ORTHO05D009355 6.5e-12 75.5 214 28.5
Migut.K00709 Erythranthe guttata HOM05D007857 ORTHO05D009355 6.5e-12 75.5 139 33.8
Gohir.A03G127600 Gossypium hirsutum HOM05D007857 ORTHO05D009355 8.4e-12 75.1 134 34.3
Ca_18058_v3 Cicer arietinum L. HOM05D007857 ORTHO05D009355 1.1e-11 74.7 219 30.1
Gohir.D02G151200 Gossypium hirsutum HOM05D007857 ORTHO05D009355 1.1e-11 74.7 134 35.1
Gorai.005G169600 Gossypium raimondii HOM05D007857 ORTHO05D009355 1.1e-11 74.7 134 35.1
Sopen04g010360 Solanum pennellii HOM05D007857 ORTHO05D009355 1.4e-11 74.3 82 45.1
Sc04g0010010 Simmondsia chinensis HOM05D007857 ORTHO05D009355 2.5e-11 73.6 247 30.0
Ciclev10033758m.g Citrus clementina HOM05D007857 ORTHO05D009355 7.2e-11 72.0 287 25.4
Glyma.03G186400 Glycine max HOM05D007857 ORTHO05D009355 7.2e-11 72.0 150 35.3
Atru.chr11.2290 Acer truncatum HOM05D007857 ORTHO05D009355 9.3e-11 71.6 237 26.2
Potri.010G057800 Populus trichocarpa HOM05D007857 ORTHO05D009355 9.3e-11 71.6 100 40.0
CANSAT01G1499 Cannabis sativa HOM05D007857 ORTHO05D009355 1.2e-10 71.2 126 33.3
Manes.13G017400 Manihot esculenta HOM05D007857 ORTHO05D009355 1.2e-10 71.2 111 35.1
arahy.Tifrunner.gnm1.ann1.AFM6H1 Arachis hypogaea HOM05D007857 ORTHO05D009355 1.6e-10 70.9 112 39.3
Haze_12382 Corylus avellana HOM05D007857 ORTHO05D009355 1.6e-10 70.9 210 26.2
SalBow2G3021 Salvia bowleyana HOM05D007857 ORTHO05D009355 1.6e-10 70.9 106 37.7
PSO357G0688 Papaver somniferum HOM05D007857 ORTHO05D009355 2.7e-10 70.1 130 34.6
Cpa.g.sc43.26 Carica papaya HOM05D007857 ORTHO05D009355 3.5e-10 69.7 239 28.9
arahy.Tifrunner.gnm1.ann1.32T9N9 Arachis hypogaea HOM05D007857 ORTHO05D009355 4.6e-10 69.3 112 39.3
arahy.Tifrunner.gnm1.ann1.ZB6N55 Arachis hypogaea HOM05D007857 ORTHO05D009355 4.6e-10 69.3 112 39.3
Nn4g22377 Nelumbo nucifera HOM05D007857 ORTHO05D009355 4.6e-10 69.3 114 37.7
FAN12G2990 Fragaria x ananassa HOM05D007857 ORTHO05D009355 6.1e-10 68.9 122 37.7
FvH4_4g24090 Fragaria vesca HOM05D007857 ORTHO05D009355 7.9e-10 68.6 122 37.7
FAN07G0728 Fragaria x ananassa HOM05D007857 ORTHO05D009355 7.9e-10 68.6 119 37.0
CsaV3_2G025390 Cucumis sativus L. HOM05D007857 ORTHO05D009355 3.9e-09 66.2 128 32.0
MELO3C010736.2 Cucumis melo HOM05D007857 ORTHO05D009355 8.7e-09 65.1 181 32.0
Nitab4.5_0004967g0040 Nicotiana tabacum HOM05D007857 ORTHO05D009355 8.7e-09 65.1 82 39.0
Aqoxy5G03443 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 3.3e-08 63.2 141 32.6
Medtr8g080270 Medicago truncatula HOM05D007857 ORTHO05D009355 4.3e-08 62.8 102 37.3
SHI17949 Sapria himalayana HOM05D007857 ORTHO05D009355 4.3e-08 62.8 110 38.2
Cc11_g16750 Coffea canephora HOM05D007857 ORTHO05D009355 7.4e-08 62.0 99 35.4
TAR622G0135 Trochodendron aralioides HOM05D007857 ORTHO05D009355 1.6e-07 60.8 133 30.8
Sabra08G0135300 Salix brachista HOM05D007857 ORTHO05D009355 2.2e-07 60.5 97 36.1
Psat7g078480 Pisum sativum HOM05D007857 ORTHO05D009355 3.7e-07 59.7 220 28.2
Cfa009341 Carpinus fangiana HOM05D007857 ORTHO05D009355 1.1e-06 58.2 189 32.8
Nitab4.5_0000146g0080 Nicotiana tabacum HOM05D007857 ORTHO05D009355 1.1e-06 58.2 62 45.2
Lsat_1_v5_gn_8_149921 Lactuca sativa HOM05D007857 ORTHO05D009355 1.4e-06 57.8 192 29.7
TPR.G17074 Trifolium pratense HOM05D007857 ORTHO05D009355 2.4e-06 57.0 112 32.1
MBI11_g31349_MAGBIO Magnolia biondii HOM05D007857 ORTHO05D009355 4.1e-06 56.2 141 29.1


User provided reference genes

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