Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g22520 Schrenkiella parvula HOM05D006477 ORTHO05D008311 5.9e-43 177.2 92 100.0
BcaNung05073 Brassica carinata HOM05D006477 ORTHO05D008311 1.3e-42 176.0 92 97.8
A07p34050 Brassica napus HOM05D006477 ORTHO05D008311 1.7e-42 175.6 92 96.7
C06p42740 Brassica napus HOM05D006477 ORTHO05D008311 2.2e-42 175.3 92 95.7
C06p42790 Brassica napus HOM05D006477 ORTHO05D008311 2.2e-42 175.3 92 95.7
BolC6t39165H Brassica oleracea HOM05D006477 ORTHO05D008311 2.2e-42 175.3 92 95.7
Thhalv10019379m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 2.2e-42 175.3 92 97.8
BraA07t31031Z Brassica rapa HOM05D006477 ORTHO05D008311 8.5e-42 173.3 92 94.6
AT1G65032 Arabidopsis thaliana HOM05D006477 ORTHO05D008311 1.9e-41 172.2 92 96.7
AL2G19670 Arabidopsis lyrata HOM05D006477 ORTHO05D008311 3.2e-41 171.4 92 96.7
C06p41870 Brassica napus HOM05D006477 ORTHO05D008311 5.5e-41 170.6 92 94.6
BolC6t39243H Brassica oleracea HOM05D006477 ORTHO05D008311 5.5e-41 170.6 92 94.6
Carub.0002s1025 Capsella rubella HOM05D006477 ORTHO05D008311 2.1e-40 168.7 92 94.6
THA.LOC104823802 Tarenaya hassleriana HOM05D006477 ORTHO05D008311 5.7e-38 160.6 92 88.0
BcaC08g46243 Brassica carinata HOM05D006477 ORTHO05D008311 4.7e-32 141.0 92 83.7
Thhalv10019610m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 3.0e-31 138.3 73 97.3
BcaB03g15190 Brassica carinata HOM05D006477 ORTHO05D008311 2.2e-29 132.1 92 79.3
Gohir.A12G270700 Gossypium hirsutum HOM05D006477 ORTHO05D008311 1.5e-25 119.4 84 69.0
Gohir.D12G271100 Gossypium hirsutum HOM05D006477 ORTHO05D008311 1.5e-25 119.4 84 69.0
Gorai.008G291500 Gossypium raimondii HOM05D006477 ORTHO05D008311 1.5e-25 119.4 84 69.0
Duzib128G0861 Durio zibethinus HOM05D006477 ORTHO05D008311 3.2e-25 118.2 82 70.7
Aqoxy7G00962 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.2e-24 116.3 88 64.8
QL05p054895 Quercus lobata HOM05D006477 ORTHO05D008311 1.2e-24 116.3 82 69.5
QL05p056339 Quercus lobata HOM05D006477 ORTHO05D008311 1.2e-24 116.3 82 69.5
Manes.06G016700 Manihot esculenta HOM05D006477 ORTHO05D008311 2.1e-24 115.5 84 66.7
Manes.06G016750 Manihot esculenta HOM05D006477 ORTHO05D008311 2.1e-24 115.5 84 66.7
GSVIVG01001179001 Vitis vinifera HOM05D006477 ORTHO05D008311 2.1e-24 115.5 82 69.5
Potri.005G094100 Populus trichocarpa HOM05D006477 ORTHO05D008311 2.7e-24 115.2 83 67.5
HPP92_026480 Vanilla planifolia HOM05D006477 ORTHO05D008311 3.6e-24 114.8 82 67.1
COL.COLO4_15215 Corchorus olitorius HOM05D006477 ORTHO05D008311 4.7e-24 114.4 84 66.7
Actinidia31748 Actinidia chinensis HOM05D006477 ORTHO05D008311 8.0e-24 113.6 89 65.2
arahy.Tifrunner.gnm1.ann1.2E1B03 Arachis hypogaea HOM05D006477 ORTHO05D008311 8.0e-24 113.6 84 65.5
arahy.Tifrunner.gnm1.ann1.B2599V Arachis hypogaea HOM05D006477 ORTHO05D008311 8.0e-24 113.6 84 65.5
Cfa003675 Carpinus fangiana HOM05D006477 ORTHO05D008311 8.0e-24 113.6 82 67.1
FAN06G1803 Fragaria x ananassa HOM05D006477 ORTHO05D008311 1.0e-23 113.2 90 61.1
MBI04_g32195_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.0e-23 113.2 82 67.1
Thecc.07G155600 Theobroma cacao HOM05D006477 ORTHO05D008311 1.0e-23 113.2 82 68.3
Aqoxy6G02884 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.4e-23 112.8 84 66.7
COL.COLO4_37808 Corchorus olitorius HOM05D006477 ORTHO05D008311 1.4e-23 112.8 84 66.7
ClCG06G008130 Citrullus lanatus HOM05D006477 ORTHO05D008311 1.8e-23 112.5 82 65.9
Haze_15813 Corylus avellana HOM05D006477 ORTHO05D008311 1.8e-23 112.5 81 66.7
FAN03G3069 Fragaria x ananassa HOM05D006477 ORTHO05D029725 1.8e-23 112.5 90 60.0
Actinidia05816 Actinidia chinensis HOM05D006477 ORTHO05D008311 3.0e-23 111.7 89 64.0
MELO3C020371.2 Cucumis melo HOM05D006477 ORTHO05D008311 3.0e-23 111.7 82 64.6
unitig_27.g24761 Utricularia gibba HOM05D006477 ORTHO05D008311 5.2e-23 110.9 82 68.3
CAN.G700.29 Capsicum annuum HOM05D006477 ORTHO05D008311 6.8e-23 110.5 82 67.1
Nitab4.5_0004594g0090 Nicotiana tabacum HOM05D006477 ORTHO05D008311 8.8e-23 110.2 88 61.4
Lalb_Chr25g0285311 Lupinus albus HOM05D006477 ORTHO05D008311 1.2e-22 109.8 82 64.6
PGR042G2475 Punica granatum HOM05D006477 ORTHO05D008311 1.2e-22 109.8 82 62.2
SGA_v2.0_scaffold120G32938 Striga asiatica HOM05D006477 ORTHO05D008311 1.2e-22 109.8 82 64.6
Aqoxy5G03392 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.5e-22 109.4 79 68.4
Aqoxy7G00965 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.5e-22 109.4 79 68.4
FvH4_7g07070 Fragaria vesca HOM05D006477 ORTHO05D008311 1.5e-22 109.4 85 62.4
Nitab4.5_0004800g0020 Nicotiana tabacum HOM05D006477 ORTHO05D008311 1.5e-22 109.4 88 60.2
ATR0829G122 Amborella trichopoda HOM05D006477 ORTHO05D008311 2.0e-22 109.0 82 65.9
TWI59G0878 Tripterygium wilfordii HOM05D006477 ORTHO05D008311 2.0e-22 109.0 82 64.6
FAN10G2338 Fragaria x ananassa HOM05D006477 ORTHO05D008311 2.6e-22 108.6 85 62.4
EL10Ac6g14607 Beta vulgaris HOM05D006477 ORTHO05D008311 3.4e-22 108.2 82 64.6
Cc02_g26330 Coffea canephora HOM05D006477 ORTHO05D008311 3.4e-22 108.2 84 61.9
AUR62007820 Chenopodium quinoa HOM05D006477 ORTHO05D008311 4.4e-22 107.8 84 61.9
MBI04_g32196_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 4.4e-22 107.8 82 63.4
SalBow6G6803 Salvia bowleyana HOM05D006477 ORTHO05D008311 4.4e-22 107.8 82 63.4
Ciclev10023972m.g Citrus clementina HOM05D006477 ORTHO05D008311 5.7e-22 107.5 87 64.4
PGSC0003DMG400001789 Solanum tuberosum HOM05D006477 ORTHO05D008311 5.7e-22 107.5 82 65.9
CiPaw.03G039600 Carya illinoinensis HOM05D006477 ORTHO05D008311 7.5e-22 107.1 82 63.4
QL03p061357 Quercus lobata HOM05D006477 ORTHO05D008311 7.5e-22 107.1 87 60.9
QL05p056259 Quercus lobata HOM05D006477 ORTHO05D008311 7.5e-22 107.1 78 67.9
Eucgr.E04248 Eucalyptus grandis HOM05D006477 ORTHO05D008311 9.8e-22 106.7 82 62.2
Solyc01g081120.2 Solanum lycopersicum HOM05D006477 ORTHO05D008311 1.7e-21 105.9 82 63.4
Sopen01g032730 Solanum pennellii HOM05D006477 ORTHO05D008311 1.7e-21 105.9 82 63.4
Migut.J00830 Erythranthe guttata HOM05D006477 ORTHO05D008311 2.2e-21 105.5 82 62.2
Rhsim07G0044200 Rhododendron simsii HOM05D006477 ORTHO05D008311 2.2e-21 105.5 82 63.4
CSS0043287 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 2.8e-21 105.1 82 63.4
Hma1.2p1_2755F.1_g327960 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 2.8e-21 105.1 84 59.5
CSS0025225 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 3.7e-21 104.8 82 63.4
Lj1g0022259 Lotus japonicus HOM05D006477 ORTHO05D008311 3.7e-21 104.8 82 62.2
Rhsim07G0044700 Rhododendron simsii HOM05D006477 ORTHO05D008311 3.7e-21 104.8 82 62.2
Sabra05G0077900 Salix brachista HOM05D006477 ORTHO05D008311 4.8e-21 104.4 78 66.7
Hma1.2p1_0915F.1_g236330 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 6.3e-21 104.0 81 61.7
TPR.G24136 Trifolium pratense HOM05D006477 ORTHO05D008311 6.3e-21 104.0 82 59.8
Ca_18942_v3 Cicer arietinum L. HOM05D006477 ORTHO05D008311 1.1e-20 103.2 82 61.0
RcHm_v2.0_Chr1g0337021 Rosa chinensis HOM05D006477 ORTHO05D008311 1.1e-20 103.2 82 61.0
vmacro13578 Vaccinium macrocarpon HOM05D006477 ORTHO05D008311 1.1e-20 103.2 85 60.0
TPR.G19239 Trifolium pratense HOM05D006477 ORTHO05D008311 1.4e-20 102.8 82 58.5
Prupe.2G097300 Prunus persica HOM05D006477 ORTHO05D008311 1.8e-20 102.4 82 61.0
Atru.chr3.3240 Acer truncatum HOM05D006477 ORTHO05D008311 4.1e-20 101.3 87 60.9
Glyma.12G115400 Glycine max HOM05D006477 ORTHO05D008311 4.1e-20 101.3 81 58.0
MD07G1076600 Malus domestica HOM05D006477 ORTHO05D008311 4.1e-20 101.3 82 57.3
Phvul.010G094300 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 4.1e-20 101.3 81 59.3
Glyma.06G291500 Glycine max HOM05D006477 ORTHO05D008311 5.4e-20 100.9 81 58.0
ECA234G3546 Erigeron canadensis HOM05D006477 ORTHO05D008311 9.1e-20 100.1 82 58.5
Rhsim07G0124700 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.2e-19 99.8 82 59.8
Medtr4g078485 Medicago truncatula HOM05D006477 ORTHO05D008311 1.6e-19 99.4 78 62.8
Zm00001eb326860 Zea mays HOM05D006477 ORTHO05D008311 1.6e-19 99.4 84 54.8
HanXRQChr15g0495711 Helianthus annuus HOM05D006477 ORTHO05D008311 2.7e-19 98.6 82 57.3
HanXRQChr16g0522681 Helianthus annuus HOM05D006477 ORTHO05D008311 2.7e-19 98.6 82 57.3
Phvul.011G119800 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 2.7e-19 98.6 83 56.6
SHI34920 Sapria himalayana HOM05D006477 ORTHO05D008311 3.5e-19 98.2 78 61.5
ECA234G1029 Erigeron canadensis HOM05D006477 ORTHO05D008311 4.5e-19 97.8 82 57.3
MD02G1240300 Malus domestica HOM05D006477 ORTHO05D008311 4.5e-19 97.8 82 56.1
Lsat_1_v5_gn_4_40501 Lactuca sativa HOM05D006477 ORTHO05D008311 5.9e-19 97.4 82 56.1
HanXRQChr17g0567251 Helianthus annuus HOM05D006477 ORTHO05D008311 1.3e-18 96.3 82 56.1
CsaV3_2G011040 Cucumis sativus L. HOM05D006477 ORTHO05D008311 1.7e-18 95.9 70 65.7
Cpa.g.sc53.139 Carica papaya HOM05D006477 ORTHO05D008311 2.2e-18 95.5 85 57.6
PSO017G7014 Papaver somniferum HOM05D006477 ORTHO05D008311 2.9e-18 95.1 69 66.7
Zm00001eb251360 Zea mays HOM05D006477 ORTHO05D008311 3.8e-18 94.7 84 52.4
Os02g0695700 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 3.2e-17 91.7 82 52.4
SEGI_06535 Sequoiadendron giganteum HOM05D006477 ORTHO05D008311 3.2e-17 91.7 82 51.2
Pp3c3_2840 Physcomitrium patens HOM05D006477 ORTHO05D008311 6.1e-16 87.4 85 49.4
Os04g0624900 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 6.8e-15 84.0 77 50.6
Peaxi162Scf00592g00428 Petunia axillaris HOM05D000001 ORTHO05D000003 1.1e-12 76.6 67 56.7
DCAR_024347 Daucus carota HOM05D006477 ORTHO05D008311 2.4e-12 75.5 57 61.4
Mapoly0009s0212 Marchantia polymorpha HOM05D006477 ORTHO05D008311 2.0e-11 72.4 85 42.4
Sed0027346 Sechium edule HOM05D006477 ORTHO05D008311 3.5e-11 71.6 47 72.3
CSS0008051 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 1.7e-10 69.3 82 46.3
MBI16_g31701_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 6.6e-10 67.4 56 62.5
Psat0s466g0120 Pisum sativum HOM05D006477 ORTHO05D008311 1.9e-09 65.9 56 58.9
C02p23080 Brassica napus HOM05D046150 ORTHO05D042944 4.3e-09 64.7 31 96.8
Psat7g168960 Pisum sativum HOM05D006477 ORTHO05D008311 5.6e-09 64.3 55 58.2
arahy.Tifrunner.gnm1.ann1.HM6XW1 Arachis hypogaea HOM05D006477 ORTHO05D008311 9.5e-09 63.5 66 53.0
Sc21g0001600 Simmondsia chinensis HOM05D006477 ORTHO05D008311 2.8e-08 62.0 47 61.7
BolC2t08450H Brassica oleracea HOM05D046150 ORTHO05D042944 1.0e-07 60.1 31 90.3
SGA_v2.0_scaffold195G40833 Striga asiatica HOM05D006477 ORTHO05D404429 2.0e-06 55.8 56 50.0
Rhsim13G0110700 Rhododendron simsii HOM05D006477 ORTHO05D008311 3.4e-06 55.1 45 53.3


User provided reference genes

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