Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g22270 Schrenkiella parvula HOM05D004124 ORTHO05D004779 3.1e-160 568.5 316 100.0
Thhalv10018870m.g Eutrema salsugineum HOM05D004124 ORTHO05D004779 4.8e-137 491.5 290 95.2
BcaB03g15346 Brassica carinata HOM05D004124 ORTHO05D004779 2.7e-135 485.7 290 93.4
AL2G25860 Arabidopsis lyrata HOM05D004124 ORTHO05D004779 1.5e-133 479.9 244 93.9
AT1G67325 Arabidopsis thaliana HOM05D004124 ORTHO05D004779 4.0e-131 471.9 244 92.2
Carub.0002s1361 Capsella rubella HOM05D004124 ORTHO05D004779 2.6e-130 469.2 289 91.3
CARHR059820 Cardamine hirsuta HOM05D004124 ORTHO05D004779 7.5e-130 467.6 289 91.7
Aa31sc584G20 Aethionema arabicum HOM05D004124 ORTHO05D004779 1.3e-126 456.8 289 90.0
C06p38790 Brassica napus HOM05D004124 ORTHO05D004779 1.7e-126 456.4 292 89.4
BolC6t38971H Brassica oleracea HOM05D004124 ORTHO05D004779 1.5e-125 453.4 292 89.0
BraA07t30886Z Brassica rapa HOM05D004124 ORTHO05D004779 4.0e-123 445.3 295 87.8
C06p42940 Brassica napus HOM05D004124 ORTHO05D004779 2.6e-122 442.6 292 86.6
A07p32620 Brassica napus HOM05D004124 ORTHO05D004779 3.4e-122 442.2 293 87.7
THA.LOC104807133 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 5.4e-120 434.9 244 86.1
BolC6t39143H Brassica oleracea HOM05D004124 ORTHO05D004779 1.0e-118 430.6 291 86.9
A07p33920 Brassica napus HOM05D000660 ORTHO05D000766 3.9e-118 428.7 248 87.1
BraA07t31018Z Brassica rapa HOM05D000660 ORTHO05D000766 4.3e-117 425.2 291 86.6
THA.LOC104825500 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 5.4e-112 408.3 289 81.7
THA.LOC104807526 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 1.0e-110 404.1 244 81.6
Manes.12G010400 Manihot esculenta HOM05D004124 ORTHO05D004779 1.3e-105 387.1 291 78.7
Gohir.A04G140100 Gossypium hirsutum HOM05D004124 ORTHO05D004779 3.2e-104 382.5 246 75.6
CANSAT01G0376 Cannabis sativa HOM05D004124 ORTHO05D004779 4.1e-104 382.1 291 77.0
Dinv10949 Davidia involucrata HOM05D004124 ORTHO05D004779 4.1e-104 382.1 290 78.3
Cc11_g16980 Coffea canephora HOM05D004124 ORTHO05D004779 1.2e-103 380.6 244 75.8
Atru.chr11.2334 Acer truncatum HOM05D004124 ORTHO05D004779 2.7e-103 379.4 242 76.9
COL.COLO4_20412 Corchorus olitorius HOM05D004124 ORTHO05D004779 4.6e-103 378.6 246 76.4
Potri.001G056000 Populus trichocarpa HOM05D004124 ORTHO05D004779 4.6e-103 378.6 246 77.6
Gorai.012G176300 Gossypium raimondii HOM05D004124 ORTHO05D004779 7.8e-103 377.9 246 74.8
GSVIVG01010495001 Vitis vinifera HOM05D004124 ORTHO05D004779 1.7e-102 376.7 242 76.9
Gohir.D04G183300 Gossypium hirsutum HOM05D004124 ORTHO05D004779 5.1e-102 375.2 248 74.6
Ciclev10033913m.g Citrus clementina HOM05D004124 ORTHO05D004779 6.6e-102 374.8 265 70.9
Haze_12426 Corylus avellana HOM05D004124 ORTHO05D004779 3.3e-101 372.5 243 74.9
arahy.Tifrunner.gnm1.ann1.JS6392 Arachis hypogaea HOM05D004124 ORTHO05D004779 4.3e-101 372.1 245 75.5
Duzib251G0523 Durio zibethinus HOM05D004124 ORTHO05D004779 4.3e-101 372.1 291 75.3
Eucgr.H04636 Eucalyptus grandis HOM05D004124 ORTHO05D004779 4.3e-101 372.1 246 76.0
Potri.003G172500 Populus trichocarpa HOM05D004124 ORTHO05D004779 7.3e-101 371.3 241 77.6
VMungo1383G0738 Vigna mungo HOM05D004124 ORTHO05D004779 7.3e-101 371.3 244 74.6
Glyma.18G005700 Glycine max HOM05D004124 ORTHO05D004779 9.5e-101 370.9 244 74.2
AUR62005628 Chenopodium quinoa HOM05D004124 ORTHO05D004779 1.6e-100 370.2 245 75.1
Glyma.11G251300 Glycine max HOM05D004124 ORTHO05D004779 2.8e-100 369.4 289 75.1
TWI18G0339 Tripterygium wilfordii HOM05D004124 ORTHO05D004779 3.6e-100 369.0 242 75.6
Phvul.001G262500 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 4.7e-100 368.6 243 74.1
arahy.Tifrunner.gnm1.ann1.B7Q2TL Arachis hypogaea HOM05D004124 ORTHO05D004779 1.4e-99 367.1 253 72.7
PGR102G1761 Punica granatum HOM05D004124 ORTHO05D004779 1.4e-99 367.1 242 76.0
Rhsim12G0025300 Rhododendron simsii HOM05D004124 ORTHO05D004779 1.4e-99 367.1 244 75.4
CiPaw.06G103200 Carya illinoinensis HOM05D004124 ORTHO05D004779 4.0e-99 365.5 239 75.7
Sabra01G0040400 Salix brachista HOM05D004124 ORTHO05D004779 6.8e-99 364.8 245 74.7
EL10Ac6g13513 Beta vulgaris HOM05D004124 ORTHO05D004779 8.9e-99 364.4 245 73.1
Gorai.005G166600 Gossypium raimondii HOM05D004124 ORTHO05D004779 1.5e-98 363.6 290 74.8
AUR62028920 Chenopodium quinoa HOM05D004124 ORTHO05D004779 2.0e-98 363.2 245 73.9
QL03p052498 Quercus lobata HOM05D004124 ORTHO05D004779 7.6e-98 361.3 234 74.4
Gohir.A03G125700 Gossypium hirsutum HOM05D004124 ORTHO05D004779 1.3e-97 360.5 290 74.5
Nn5g26967 Nelumbo nucifera HOM05D004124 ORTHO05D004779 1.3e-97 360.5 244 74.6
MSTRG.8009 Avicennia marina HOM05D004124 ORTHO05D004779 1.7e-97 360.1 244 73.0
MELO3C011859.2 Cucumis melo HOM05D004124 ORTHO05D004779 4.9e-97 358.6 291 74.2
CsaV3_5G030210 Cucumis sativus L. HOM05D004124 ORTHO05D004779 4.9e-97 358.6 291 74.2
MD16G1120200 Malus domestica HOM05D004124 ORTHO05D004779 6.4e-97 358.2 243 72.8
Nitab4.5_0000861g0060 Nicotiana tabacum HOM05D004124 ORTHO05D004779 8.3e-97 357.8 291 73.5
RcHm_v2.0_Chr4g0430131 Rosa chinensis HOM05D004124 ORTHO05D004779 1.4e-96 357.1 244 70.9
Ca_16453_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 1.9e-96 356.7 245 72.2
CAN.G163.7 Capsicum annuum HOM05D004124 ORTHO05D004779 2.4e-96 356.3 237 73.4
Nn8g41237 Nelumbo nucifera HOM05D004124 ORTHO05D004779 3.2e-96 355.9 246 72.0
Actinidia30642 Actinidia chinensis HOM05D004124 ORTHO05D004779 4.1e-96 355.5 244 73.4
FAN17G0270 Fragaria x ananassa HOM05D004124 ORTHO05D004779 5.4e-96 355.1 246 69.9
Gohir.D02G148500 Gossypium hirsutum HOM05D004124 ORTHO05D004779 5.4e-96 355.1 292 74.0
Prupe.1G225000 Prunus persica HOM05D004124 ORTHO05D004779 5.4e-96 355.1 225 76.0
FvH4_4g23660 Fragaria vesca HOM05D004124 ORTHO05D004779 1.2e-95 354.0 244 70.1
FAN07G1336 Fragaria x ananassa HOM05D004124 ORTHO05D004779 1.2e-95 354.0 246 69.1
FAN12G0357 Fragaria x ananassa HOM05D004124 ORTHO05D004779 1.2e-95 354.0 244 70.1
PGSC0003DMG400034304 Solanum tuberosum HOM05D004124 ORTHO05D004779 1.6e-95 353.6 228 74.6
Lalb_Chr11g0075781 Lupinus albus HOM05D004124 ORTHO05D004779 2.1e-95 353.2 244 70.5
Sopen05g010890 Solanum pennellii HOM05D004124 ORTHO05D004779 2.7e-95 352.8 228 74.6
TAR626G1310 Trochodendron aralioides HOM05D004124 ORTHO05D004779 6.0e-95 351.7 245 72.2
FAN22G1987 Fragaria x ananassa HOM05D004124 ORTHO05D004779 7.8e-95 351.3 244 69.7
Peaxi162Scf00128g01335 Petunia axillaris HOM05D004124 ORTHO05D004779 1.0e-94 350.9 241 71.4
Lj6g0002227 Lotus japonicus HOM05D004124 ORTHO05D004779 3.0e-94 349.4 244 72.1
Sabra03G0126200 Salix brachista HOM05D004124 ORTHO05D004779 3.0e-94 349.4 227 75.8
Hund25468 Selenicereus undatus HOM05D004124 ORTHO05D004779 6.6e-94 348.2 261 67.8
Psat5g096680 Pisum sativum HOM05D004124 ORTHO05D004779 8.6e-94 347.8 245 71.0
MBI13_g33572_MAGBIO Magnolia biondii HOM05D004124 ORTHO05D004779 1.1e-93 347.4 247 70.9
Solyc05g015500.4 Solanum lycopersicum HOM05D004124 ORTHO05D004779 1.1e-93 347.4 226 73.9
Medtr3g085190 Medicago truncatula HOM05D004124 ORTHO05D004779 3.3e-93 345.9 244 70.1
Actinidia09646 Actinidia chinensis HOM05D004124 ORTHO05D004779 7.3e-93 344.7 289 71.6
Hund06093 Selenicereus undatus HOM05D004124 ORTHO05D004779 7.3e-93 344.7 244 71.7
Duzib248G0967 Durio zibethinus HOM05D004124 ORTHO05D004779 1.6e-92 343.6 242 71.1
vmacro01057 Vaccinium macrocarpon HOM05D004124 ORTHO05D004779 2.8e-92 342.8 300 61.0
MSTRG.500 Avicennia marina HOM05D004124 ORTHO05D004779 6.2e-92 341.7 246 69.1
TAR383G0859 Trochodendron aralioides HOM05D004124 ORTHO05D004779 6.2e-92 341.7 243 70.4
Actinidia08066 Actinidia chinensis HOM05D004124 ORTHO05D004779 4.0e-91 339.0 278 64.4
SGA_v2.0_scaffold391G50628 Striga asiatica HOM05D004124 ORTHO05D004779 8.9e-91 337.8 246 69.9
TPR.G17791 Trifolium pratense HOM05D004124 ORTHO05D004779 1.7e-89 333.6 231 71.0
Lalb_Chr07g0187111 Lupinus albus HOM05D004124 ORTHO05D004779 8.4e-89 331.3 245 68.6
PSO063G2768 Papaver somniferum HOM05D004124 ORTHO05D004779 1.6e-87 327.0 251 68.5
Migut.K00950 Erythranthe guttata HOM05D004124 ORTHO05D004779 3.5e-87 325.9 291 68.7
PSO170G5699 Papaver somniferum HOM05D004124 ORTHO05D004779 4.6e-87 325.5 251 68.1
ECA234G0541 Erigeron canadensis HOM05D004124 ORTHO05D004779 1.7e-86 323.6 228 68.0
Sed0002251 Sechium edule HOM05D004124 ORTHO05D004779 3.0e-86 322.8 291 71.1
Lalb_Chr08g0230601 Lupinus albus HOM05D004124 ORTHO05D004779 3.3e-85 319.3 245 67.3
Lalb_Chr13g0294351 Lupinus albus HOM05D004124 ORTHO05D004779 4.3e-85 318.9 291 68.7
Thecc.02G206600 Theobroma cacao HOM05D004124 ORTHO05D004779 9.6e-85 317.8 214 74.3
Lj6A827G48 Lonicera japonica HOM05D004124 ORTHO05D004779 1.1e-83 314.3 212 71.7
Aqoxy7G02609 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 1.8e-83 313.5 247 66.4
DCAR_024098 Daucus carota HOM05D004124 ORTHO05D004779 5.3e-83 312.0 247 65.2
ECA233G0726 Erigeron canadensis HOM05D004124 ORTHO05D004779 2.6e-82 309.7 244 65.6
ATR0626G238 Amborella trichopoda HOM05D004124 ORTHO05D004779 3.4e-82 309.3 247 64.8
HanXRQChr12g0372641 Helianthus annuus HOM05D004124 ORTHO05D004779 1.3e-81 307.4 243 65.4
HanXRQChr17g0569011 Helianthus annuus HOM05D004124 ORTHO05D004779 1.3e-81 307.4 242 64.9
Manes.13G011200 Manihot esculenta HOM05D004124 ORTHO05D004779 1.4e-80 303.9 291 66.7
Lj3A1069T45 Lonicera japonica HOM05D004124 ORTHO05D004779 1.7e-78 297.0 223 66.8
Ah.03g136110 Amaranthus hybridus HOM05D004124 ORTHO05D004779 9.6e-77 291.2 229 65.5
Eucgr.B03499 Eucalyptus grandis HOM05D004124 ORTHO05D004779 2.8e-76 289.7 240 62.5
Sed0008103 Sechium edule HOM05D004124 ORTHO05D004779 3.6e-76 289.3 237 63.7
DCAR_026459 Daucus carota HOM05D004124 ORTHO05D004779 8.1e-76 288.1 228 62.3
HanXRQChr12g0361221 Helianthus annuus HOM05D004124 ORTHO05D004779 8.1e-76 288.1 243 62.6
Lsat_1_v5_gn_4_400 Lactuca sativa HOM05D004124 ORTHO05D004779 8.1e-76 288.1 246 63.4
Sc04g0010190 Simmondsia chinensis HOM05D004124 ORTHO05D004779 1.3e-73 280.8 245 61.6
unitig_749.g13306 Utricularia gibba HOM05D004124 ORTHO05D004779 1.0e-70 271.2 246 61.0
CSS0002767 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 1.1e-69 267.7 199 67.8
CiPaw.05G108900 Carya illinoinensis HOM05D004124 ORTHO05D004779 4.8e-68 262.3 248 69.4
Zm00001eb174550 Zea mays HOM05D004124 ORTHO05D004779 4.8e-68 262.3 250 57.6
CSS0020706 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 1.4e-67 260.8 232 72.4
Duzib268G1736 Durio zibethinus HOM05D004124 ORTHO05D004779 1.3e-65 254.2 236 71.2
ClCG11G013590 Citrullus lanatus HOM05D004124 ORTHO05D004779 1.4e-64 250.8 291 60.5
CDE04G3109 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 6.0e-63 245.4 243 56.8
Oeu049141.1 Olea europaea HOM05D004124 ORTHO05D004779 1.0e-62 244.6 221 59.3
Zm00001eb035500 Zea mays HOM05D004124 ORTHO05D004779 1.3e-62 244.2 250 54.0
Oeu006524.1 Olea europaea HOM05D004124 ORTHO05D004779 1.1e-61 241.1 203 62.6
Nitab4.5_0003900g0010 Nicotiana tabacum HOM05D004124 ORTHO05D004779 7.4e-61 238.4 234 67.1
HPP92_015269 Vanilla planifolia HOM05D004124 ORTHO05D004779 7.4e-61 238.4 205 61.0
Lsat_1_v5_gn_8_147801 Lactuca sativa HOM05D004124 ORTHO05D004779 9.6e-61 238.0 236 58.1
Os08g0521400 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 1.3e-54 217.6 252 51.2
HanXRQChr08g0221261 Helianthus annuus HOM05D004124 ORTHO05D004779 7.7e-42 175.3 131 66.4
Cpa.g.sc43.62 Carica papaya HOM05D004124 ORTHO05D004779 1.6e-39 167.5 161 54.7
Lsat_1_v5_gn_5_94821 Lactuca sativa HOM05D004124 ORTHO05D004779 2.6e-34 150.2 249 53.8
Pp3c4_8110 Physcomitrium patens HOM05D004124 ORTHO05D004779 3.6e-31 139.8 244 42.2
AagrBONN_evm.TU.Sc2ySwM_340.309 Anthoceros agrestis HOM05D004124 ORTHO05D004779 4.7e-31 139.4 241 39.0
SMO200G0023 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 4.0e-30 136.3 236 41.5
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 2.0e-26 124.0 238 37.8
PGR083G0898 Punica granatum HOM05D004124 ORTHO05D004779 5.9e-26 122.5 188 45.2
Mapoly0005s0267 Marchantia polymorpha HOM05D004124 ORTHO05D004779 7.7e-26 122.1 258 36.0
arahy.Tifrunner.gnm1.ann1.FNBZ5S Arachis hypogaea HOM05D004124 ORTHO05D004779 6.5e-25 119.0 222 38.3
BcaNung07398 Brassica carinata HOM05D004124 ORTHO05D004779 2.5e-24 117.1 54 98.1
CiPaw.14G021000 Carya illinoinensis HOM05D004124 ORTHO05D004779 1.6e-23 114.4 225 36.0
Lj3g0004507 Lotus japonicus HOM05D004124 ORTHO05D004779 1.8e-22 110.9 233 36.1
TAR374G0532 Trochodendron aralioides HOM05D004124 ORTHO05D004779 3.0e-22 110.2 231 34.2
arahy.Tifrunner.gnm1.ann1.4H3LGZ Arachis hypogaea HOM05D004124 ORTHO05D004779 8.8e-22 108.6 235 35.7
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 1.2e-21 108.2 254 33.1
Glyma.18G252600 Glycine max HOM05D004124 ORTHO05D004779 1.5e-21 107.8 226 35.0
Ca_14066_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 3.4e-21 106.7 237 34.2
TAR375G0412 Trochodendron aralioides HOM05D004124 ORTHO05D004779 7.5e-21 105.5 242 35.1
Nn1g00866 Nelumbo nucifera HOM05D004124 ORTHO05D004779 9.8e-21 105.1 237 34.2
PSO782G3756 Papaver somniferum HOM05D004124 ORTHO05D004779 2.2e-20 104.0 238 34.9
Aqoxy3G02746 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 1.8e-19 100.9 240 35.0
Phvul.008G046200 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 3.1e-19 100.1 237 32.5
CBR_g53713 Chara braunii HOM05D004124 ORTHO05D004779 9.1e-19 98.6 239 35.6
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 2.0e-18 97.4 238 33.2
PGR083G1960 Punica granatum HOM05D000500 ORTHO05D000367 2.9e-17 93.6 56 75.0
CDE06G1514 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 6.5e-17 92.4 229 33.6
Os07g0490600 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 7.2e-16 89.0 254 31.1
Actinidia20714 Actinidia chinensis HOM05D004124 ORTHO05D004779 2.7e-15 87.0 45 84.4
Zm00001eb105300 Zea mays HOM05D004124 ORTHO05D004779 4.4e-13 79.7 259 30.5
Glyma.09G242400 Glycine max HOM05D004124 ORTHO05D004779 1.3e-12 78.2 169 36.7
HanXRQChr12g0379451 Helianthus annuus HOM05D004124 ORTHO05D004779 1.1e-11 75.1 53 64.2
Eucgr.L03169 Eucalyptus grandis HOM05D004124 ORTHO05D004779 1.6e-10 71.2 104 44.2
PSO063G6881 Papaver somniferum HOM05D004124 ORTHO05D004779 1.3e-09 68.2 172 33.7
QL04p030562 Quercus lobata HOM05D004124 ORTHO05D000004 2.9e-09 67.0 51 54.9
Haze_02835 Corylus avellana HOM05D004124 ORTHO05D004779 1.1e-08 65.1 48 56.2
Psat7g021520 Pisum sativum HOM05D004124 ORTHO05D004779 7.2e-08 62.4 259 27.0
Zm00001eb321720 Zea mays HOM05D004124 ORTHO05D004779 2.1e-07 60.8 67 44.8
AagrBONN_evm.TU.Sc2ySwM_368.334 Anthoceros agrestis HOM05D004124 ORTHO05D004779 1.4e-06 58.2 35 62.9
QL04p030567 Quercus lobata HOM05D004124 ORTHO05D004779 1.8e-06 57.8 57 47.4
SMO181G0003 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 1.8e-06 57.8 30 70.0
ATR0057G076 Amborella trichopoda HOM05D004124 ORTHO05D004779 6.8e-06 55.8 49 49.0


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