Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 1.8e-265 918.7 455 100.0
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 2.2e-255 885.2 455 95.4
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 7.7e-253 876.7 455 94.3
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 1.3e-252 875.9 455 94.1
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 5.0e-252 874.0 455 94.1
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 1.0e-249 866.3 474 90.1
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 1.2e-248 862.8 475 89.9
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 4.4e-248 860.9 484 88.4
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 6.3e-247 857.1 466 91.0
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 5.3e-246 854.0 455 92.1
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 1.6e-242 842.4 455 91.2
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 1.8e-241 839.0 455 90.5
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 8.3e-239 830.1 455 89.9
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 5.4e-230 800.8 448 86.8
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 2.1e-226 788.9 412 93.9
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 7.5e-224 780.4 451 84.7
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 1.2e-210 736.5 448 77.2
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 1.4e-209 733.0 453 77.0
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 4.0e-209 731.5 462 79.0
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 2.1e-205 719.2 452 75.7
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 3.0e-204 715.3 452 75.2
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 9.5e-203 710.3 448 74.8
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 1.1e-201 706.8 452 73.5
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 1.4e-201 706.4 453 74.8
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 1.8e-201 706.1 448 73.9
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 2.3e-201 705.7 452 74.8
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 3.1e-201 705.3 448 74.6
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 4.0e-201 704.9 448 73.9
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 5.2e-201 704.5 448 74.3
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 1.2e-200 703.4 448 74.1
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 1.2e-200 703.4 451 74.1
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 1.2e-200 703.4 452 73.2
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 2.6e-200 702.2 454 73.6
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 4.4e-200 701.4 449 74.2
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 7.6e-200 700.7 448 75.7
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 7.6e-200 700.7 449 74.8
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 7.6e-200 700.7 449 73.9
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 1.3e-199 699.9 455 73.6
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 6.4e-199 697.6 455 72.5
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 1.4e-198 696.4 451 73.6
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 1.9e-198 696.0 477 72.3
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 7.1e-198 694.1 448 72.8
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 7.1e-198 694.1 474 69.6
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 9.2e-198 693.7 448 73.2
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.6e-197 693.0 456 73.5
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 2.1e-197 692.6 448 73.2
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 3.5e-197 691.8 448 73.9
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 3.5e-197 691.8 452 73.2
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 6.0e-197 691.0 458 72.1
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 6.0e-197 691.0 448 73.2
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 1.0e-196 690.3 449 72.4
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.0e-196 690.3 448 73.2
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 3.9e-196 688.3 448 73.2
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 8.6e-196 687.2 448 73.7
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 1.1e-195 686.8 444 72.5
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 1.5e-195 686.4 438 74.7
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 3.3e-195 685.3 449 72.6
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 9.6e-195 683.7 413 78.2
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 9.6e-195 683.7 449 71.0
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 1.2e-194 683.3 454 71.1
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 1.2e-194 683.3 448 71.7
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 2.8e-194 682.2 449 72.2
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 3.6e-194 681.8 448 72.5
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 4.7e-194 681.4 449 71.9
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 4.7e-194 681.4 448 71.2
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 4.7e-194 681.4 448 73.0
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 8.1e-194 680.6 453 72.2
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 1.4e-193 679.9 431 73.5
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 3.1e-193 678.7 460 71.3
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 4.0e-193 678.3 454 70.0
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 6.9e-193 677.6 448 70.8
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 2.6e-192 675.6 455 71.4
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 3.4e-192 675.2 479 68.1
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 3.8e-191 671.8 449 71.0
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 6.4e-191 671.0 448 70.5
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 3.2e-190 668.7 448 71.7
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 5.4e-190 667.9 453 70.6
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 3.0e-188 662.1 449 68.4
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 8.7e-188 660.6 448 69.0
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 1.1e-187 660.2 431 73.3
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 2.5e-187 659.1 450 70.7
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 3.3e-187 658.7 448 69.6
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 3.6e-186 655.2 448 69.2
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 5.3e-185 651.4 450 70.0
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 9.0e-185 650.6 458 66.8
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 2.0e-184 649.4 466 66.5
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 7.6e-184 647.5 445 68.8
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 3.2e-182 642.1 452 69.2
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 2.8e-178 629.0 432 66.9
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 6.2e-178 627.9 463 67.0
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 3.1e-177 625.5 501 64.3
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 2.2e-175 619.4 406 71.7
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 3.8e-175 618.6 454 74.0
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 3.8e-175 618.6 452 67.5
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 3.8e-175 618.6 481 64.0
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 1.1e-174 617.1 432 68.1
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 2.7e-173 612.5 484 61.0
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 1.0e-172 610.5 408 73.0
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 1.1e-171 607.1 385 73.2
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 6.9e-169 597.8 409 70.2
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 1.0e-164 583.9 448 64.3
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 1.3e-164 583.6 380 73.4
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 2.3e-164 582.8 448 64.3
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 8.7e-164 580.9 461 63.1
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 1.4e-158 563.5 452 59.1
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 8.7e-156 554.3 427 61.4
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 4.1e-153 545.4 436 59.6
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 8.5e-151 537.7 427 60.9
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 2.6e-147 526.2 322 77.3
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 2.6e-147 526.2 434 56.7
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 1.2e-128 464.2 273 79.1
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 6.3e-114 415.2 448 50.9
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 2.7e-112 409.8 434 45.2
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 1.2e-109 401.0 438 46.6
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 5.4e-97 359.0 315 59.4
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 1.6e-93 347.4 367 51.8
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 2.3e-87 327.0 488 38.1
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 1.6e-85 320.9 181 82.3
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 1.2e-56 224.9 188 60.1
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 7.4e-54 215.7 379 38.5
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 3.7e-53 213.4 108 87.0
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 1.4e-52 211.5 348 37.4
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 1.3e-37 161.8 124 66.1
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 3.1e-36 157.1 137 60.6
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 4.1e-36 156.8 124 61.3
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 3.4e-35 153.7 360 31.9
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 4.4e-30 136.7 69 89.9
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 7.4e-30 136.0 83 68.7
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 5.9e-27 126.3 129 48.1
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 1.0e-26 125.6 102 59.8
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 5.7e-22 109.8 83 62.7
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 2.4e-20 104.4 208 31.7
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 1.6e-19 101.7 75 61.3
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 2.2e-18 97.8 67 67.2
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 1.6e-16 91.7 104 46.2
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 8.0e-16 89.4 62 62.9
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 2.6e-14 84.3 100 48.0
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 5.3e-12 76.6 63 61.9


User provided reference genes

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