Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 1.5e-228 795.8 390 100.0
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 7.0e-178 627.5 400 81.2
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 7.7e-177 624.0 405 80.0
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 2.2e-176 622.5 396 81.8
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 1.2e-174 616.7 406 79.8
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 1.8e-173 612.8 405 79.5
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 1.8e-173 612.8 405 79.5
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 2.2e-168 595.9 394 78.9
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 2.8e-163 578.9 394 77.7
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 6.1e-158 561.2 398 74.4
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 4.6e-153 545.0 395 74.2
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 4.3e-143 511.9 325 79.4
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 5.6e-135 485.0 423 63.6
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 1.6e-134 483.4 412 65.5
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 6.8e-133 478.0 410 64.4
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 1.5e-132 476.9 427 63.0
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 4.4e-132 475.3 419 62.5
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 4.1e-130 468.8 421 63.2
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 9.2e-130 467.6 438 61.4
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 4.6e-129 465.3 416 61.5
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 1.3e-128 463.8 424 62.0
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 8.6e-128 461.1 410 61.7
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 1.5e-127 460.3 412 61.2
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 1.5e-127 460.3 412 61.2
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 1.9e-127 459.9 412 60.9
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 4.7e-126 455.3 410 60.7
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 4.7e-126 455.3 410 60.7
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 8.9e-125 451.1 426 60.1
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 1.8e-101 373.6 412 52.9
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 1.5e-100 370.5 416 51.7
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 3.4e-100 369.4 370 55.9
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 7.6e-100 368.2 404 53.0
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 1.0e-99 367.9 413 52.3
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 1.3e-99 367.5 373 54.2
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 3.8e-99 365.9 392 53.8
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 4.9e-99 365.5 363 55.1
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 6.5e-99 365.2 373 53.6
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.4e-98 364.0 361 54.8
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 1.4e-98 364.0 361 54.8
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 1.4e-98 364.0 424 49.5
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 9.3e-98 361.3 396 52.3
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 1.6e-97 360.5 431 48.5
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 3.5e-97 359.4 416 50.2
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 3.5e-97 359.4 361 54.3
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 4.6e-97 359.0 367 54.5
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 1.0e-96 357.8 374 54.5
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 5.1e-96 355.5 395 51.9
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 5.1e-96 355.5 424 49.5
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 6.7e-96 355.1 368 54.1
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 3.3e-95 352.8 330 57.3
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 4.3e-95 352.4 355 54.4
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 5.7e-95 352.1 409 50.6
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 7.4e-95 351.7 357 54.1
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.6e-94 350.5 405 50.9
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 1.1e-93 347.8 422 49.3
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 1.4e-93 347.4 373 53.1
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 5.3e-93 345.5 371 53.4
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 5.3e-93 345.5 407 50.4
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 6.9e-93 345.1 354 53.4
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 3.4e-92 342.8 347 54.2
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 4.5e-92 342.4 381 51.2
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 5.9e-92 342.0 298 59.7
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 1.0e-91 341.3 354 54.0
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 5.0e-91 339.0 338 51.5
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 8.4e-91 338.2 366 53.0
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 1.4e-90 337.4 432 46.1
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 1.9e-90 337.0 406 48.0
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 1.9e-90 337.0 361 54.3
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 2.5e-90 336.7 358 53.6
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 2.5e-90 336.7 382 50.5
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 2.5e-90 336.7 398 47.2
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 4.2e-90 335.9 391 50.6
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 7.2e-90 335.1 351 53.8
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 7.2e-90 335.1 375 52.8
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 9.3e-90 334.7 386 48.4
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 1.2e-89 334.3 359 52.4
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 1.6e-89 334.0 403 47.9
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 1.6e-89 334.0 364 52.5
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 4.6e-89 332.4 349 51.0
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 4.6e-89 332.4 338 53.8
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 1.0e-88 331.3 361 53.7
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 1.8e-88 330.5 360 50.3
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 5.1e-88 328.9 365 51.8
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 6.7e-88 328.6 377 49.1
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 8.7e-88 328.2 381 50.4
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 8.7e-88 328.2 406 49.3
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 1.9e-87 327.0 370 47.8
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 1.9e-87 327.0 381 47.2
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 3.3e-87 326.2 440 45.0
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 3.3e-87 326.2 299 58.5
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 3.3e-87 326.2 324 55.2
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 7.4e-87 325.1 381 47.0
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 9.7e-87 324.7 352 53.1
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 1.3e-86 324.3 336 55.1
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 1.3e-86 324.3 394 45.7
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.6e-86 323.9 359 51.5
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 2.2e-86 323.6 366 47.5
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 1.4e-85 320.9 394 49.0
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 4.1e-85 319.3 330 54.5
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 1.5e-84 317.4 421 47.0
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 6.5e-83 312.0 328 52.1
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 2.7e-81 306.6 323 50.2
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 1.4e-80 304.3 385 44.4
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 3.0e-80 303.1 288 55.6
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 2.0e-79 300.4 359 46.5
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 2.5e-79 300.1 394 43.9
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 2.5e-79 300.1 322 50.3
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 4.3e-79 299.3 318 48.7
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 5.7e-79 298.9 409 45.2
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 7.4e-79 298.5 353 47.6
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 7.4e-79 298.5 402 45.5
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 1.3e-78 297.7 335 49.6
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 6.3e-78 295.4 367 47.1
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 8.2e-78 295.0 387 44.2
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 3.1e-77 293.1 360 46.4
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 8.5e-75 285.0 320 50.6
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 1.3e-70 271.2 320 47.2
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 3.7e-70 269.6 302 49.3
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 2.2e-67 260.4 383 41.0
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 1.9e-66 257.3 343 42.9
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 1.9e-66 257.3 361 44.0
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 7.2e-66 255.4 302 48.7
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.4e-64 251.1 278 51.4
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.5e-63 247.7 301 47.5
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 9.7e-63 245.0 418 38.5
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 5.9e-60 235.7 293 46.4
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 5.0e-59 232.6 271 49.1
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 8.0e-57 225.3 293 45.4
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 4.0e-56 223.0 266 48.1
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 7.5e-55 218.8 272 46.7
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 4.8e-54 216.1 361 39.9
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 2.2e-51 207.2 276 44.6
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 3.4e-47 193.4 171 59.1
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 4.4e-47 193.0 172 57.6
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 4.1e-45 186.4 185 54.1
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 1.2e-44 184.9 175 55.4
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 5.6e-42 176.0 279 41.9
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 2.5e-34 150.6 428 30.8
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 3.2e-29 133.7 362 31.5
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 1.3e-27 128.3 195 41.5
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 3.3e-26 123.6 433 28.6
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 4.7e-25 119.8 205 37.1
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 1.1e-24 118.6 311 31.2
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 1.7e-19 101.3 86 60.5
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 5.6e-18 96.3 125 40.0
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 6.2e-17 92.8 114 49.1
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 5.2e-16 89.7 141 44.0
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 3.4e-07 60.5 55 54.5
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 2.9e-06 57.4 125 32.8
C06p43060 Brassica napus HOM05D000171 ORTHO05D000101 3.8e-06 57.0 68 48.5
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 4.9e-06 56.6 131 32.8


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