Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g22010 Schrenkiella parvula HOM05D004693 ORTHO05D005545 3.2e-128 461.8 243 100.0
C02p22440 Brassica napus HOM05D004693 ORTHO05D005545 1.9e-104 382.9 243 86.0
BcaC03g14797 Brassica carinata HOM05D004693 ORTHO05D005545 2.4e-104 382.5 243 85.6
BcaB05g24236 Brassica carinata HOM05D004693 ORTHO05D005545 7.1e-104 380.9 243 86.0
BolC2t08398H Brassica oleracea HOM05D004693 ORTHO05D005545 9.2e-104 380.6 243 85.6
Thhalv10019078m.g Eutrema salsugineum HOM05D004693 ORTHO05D005545 1.0e-102 377.1 228 89.0
A02p13930 Brassica napus HOM05D004693 ORTHO05D005545 3.9e-102 375.2 243 84.8
BraA02t06454Z Brassica rapa HOM05D004693 ORTHO05D005545 3.9e-102 375.2 243 84.8
Carub.0002s1337 Capsella rubella HOM05D004693 ORTHO05D005545 3.0e-86 322.4 228 78.1
CARHR059530 Cardamine hirsuta HOM05D004693 ORTHO05D005545 3.0e-86 322.4 224 80.4
AT1G67080 Arabidopsis thaliana HOM05D004693 ORTHO05D005545 9.6e-85 317.4 228 76.3
AL2G25440 Arabidopsis lyrata HOM05D004693 ORTHO05D005545 2.1e-84 316.2 219 78.1
THA.LOC104805567 Tarenaya hassleriana HOM05D004693 ORTHO05D005545 1.1e-77 293.9 235 67.7
Aa31LG2G3480 Aethionema arabicum HOM05D004693 ORTHO05D005545 2.4e-75 286.2 226 66.8
Potri.004G099500 Populus trichocarpa HOM05D004693 ORTHO05D005545 3.5e-71 272.3 188 71.3
Thecc.04G133900 Theobroma cacao HOM05D004693 ORTHO05D005545 1.0e-70 270.8 189 73.5
Actinidia15883 Actinidia chinensis HOM05D004693 ORTHO05D005545 3.0e-70 269.2 189 73.5
GSVIVG01031023001 Vitis vinifera HOM05D004693 ORTHO05D005545 5.1e-70 268.5 184 73.4
Dinv33946 Davidia involucrata HOM05D004693 ORTHO05D005545 6.7e-70 268.1 186 71.5
Manes.02G068600 Manihot esculenta HOM05D004693 ORTHO05D005545 1.1e-69 267.3 186 73.1
PGR004G1354 Punica granatum HOM05D004693 ORTHO05D005545 2.5e-69 266.2 209 64.1
Hma1.2p1_1109F.1_g257990 Hydrangea macrophylla HOM05D004693 ORTHO05D005545 3.3e-69 265.8 224 65.6
Prupe.5G053500 Prunus persica HOM05D004693 ORTHO05D005545 1.6e-68 263.5 190 68.9
Ciclev10012575m.g Citrus clementina HOM05D004693 ORTHO05D005545 2.2e-68 263.1 184 70.7
Atru.chr1.1699 Acer truncatum HOM05D004693 ORTHO05D005545 2.8e-68 262.7 182 70.3
Gohir.A12G053800 Gossypium hirsutum HOM05D004693 ORTHO05D005545 2.8e-68 262.7 187 70.6
Gorai.008G055600 Gossypium raimondii HOM05D004693 ORTHO05D005545 2.8e-68 262.7 187 70.6
CANSAT78G0919 Cannabis sativa HOM05D004693 ORTHO05D005545 4.8e-68 261.9 188 69.7
Gohir.D12G052500 Gossypium hirsutum HOM05D004693 ORTHO05D005545 4.8e-68 261.9 187 70.6
MD00G1132400 Malus domestica HOM05D004693 ORTHO05D005545 4.8e-68 261.9 190 70.0
TAR629G3320 Trochodendron aralioides HOM05D004693 ORTHO05D005545 4.8e-68 261.9 187 70.1
vmacro05556 Vaccinium macrocarpon HOM05D004693 ORTHO05D005545 4.8e-68 261.9 187 73.8
Oeu010266.2 Olea europaea HOM05D004693 ORTHO05D005545 4.1e-67 258.8 182 70.3
TWI53G0853 Tripterygium wilfordii HOM05D004693 ORTHO05D005545 4.1e-67 258.8 182 69.2
DCAR_025914 Daucus carota HOM05D004693 ORTHO05D005545 5.3e-67 258.5 183 70.5
TAR371G1203 Trochodendron aralioides HOM05D004693 ORTHO05D005545 6.9e-67 258.1 181 72.9
Nn4g23871 Nelumbo nucifera HOM05D004693 ORTHO05D005545 9.0e-67 257.7 224 62.1
arahy.Tifrunner.gnm1.ann1.GG98DF Arachis hypogaea HOM05D004693 ORTHO05D005545 1.2e-66 257.3 190 66.3
arahy.Tifrunner.gnm1.ann1.INX0GQ Arachis hypogaea HOM05D004693 ORTHO05D005545 1.2e-66 257.3 190 66.3
RcHm_v2.0_Chr7g0206351 Rosa chinensis HOM05D004693 ORTHO05D005545 1.2e-66 257.3 190 66.3
CsaV3_3G020700 Cucumis sativus L. HOM05D004693 ORTHO05D005545 1.5e-66 256.9 181 71.8
Glyma.19G047800 Glycine max HOM05D004693 ORTHO05D005545 1.5e-66 256.9 200 65.0
Lj2A442G45 Lonicera japonica HOM05D004693 ORTHO05D005545 1.5e-66 256.9 226 61.5
Medtr6g025680 Medicago truncatula HOM05D004693 ORTHO05D005545 1.5e-66 256.9 193 67.4
Medtr6g018550 Medicago truncatula HOM05D004693 ORTHO05D005545 1.0e-65 254.2 193 66.3
Medtr7g007280 Medicago truncatula HOM05D004693 ORTHO05D005545 1.0e-65 254.2 192 66.7
HanXRQChr12g0376541 Helianthus annuus HOM05D004693 ORTHO05D005545 1.3e-65 253.8 192 65.6
FvH4_5g20670 Fragaria vesca HOM05D004693 ORTHO05D005545 1.7e-65 253.4 190 65.8
TWI77G0167 Tripterygium wilfordii HOM05D004693 ORTHO05D005545 1.7e-65 253.4 185 67.6
Nn3g17869 Nelumbo nucifera HOM05D004693 ORTHO05D005545 2.2e-65 253.1 184 67.4
ClCG05G011670 Citrullus lanatus HOM05D004693 ORTHO05D005545 2.9e-65 252.7 180 70.6
Eucgr.F02496 Eucalyptus grandis HOM05D004693 ORTHO05D005545 2.9e-65 252.7 184 68.5
Prupe.3G157500 Prunus persica HOM05D004693 ORTHO05D005545 2.9e-65 252.7 216 62.5
Sabra17G0095200 Salix brachista HOM05D004693 ORTHO05D005545 2.9e-65 252.7 195 67.2
Sed0027829 Sechium edule HOM05D004693 ORTHO05D005545 2.9e-65 252.7 182 70.3
DCAR_017191 Daucus carota HOM05D004693 ORTHO05D005545 3.8e-65 252.3 180 69.4
MD06G1045700 Malus domestica HOM05D004693 ORTHO05D005545 3.8e-65 252.3 189 70.4
MD09G1253000 Malus domestica HOM05D004693 ORTHO05D005545 3.8e-65 252.3 190 67.9
Glyma.18G296600 Glycine max HOM05D004693 ORTHO05D005545 5.0e-65 251.9 187 66.8
Lsat_1_v5_gn_3_79761 Lactuca sativa HOM05D004693 ORTHO05D005545 5.0e-65 251.9 183 68.3
Actinidia36320 Actinidia chinensis HOM05D004693 ORTHO05D005545 6.5e-65 251.5 150 82.7
PGSC0003DMG401026407 Solanum tuberosum HOM05D004693 ORTHO05D005545 8.5e-65 251.1 227 59.9
Sopen02g030740 Solanum pennellii HOM05D004693 ORTHO05D005545 1.1e-64 250.8 227 59.9
ATR1125G077 Amborella trichopoda HOM05D004693 ORTHO05D005545 1.4e-64 250.4 181 68.5
PSO478G2919 Papaver somniferum HOM05D004693 ORTHO05D005545 1.4e-64 250.4 187 69.5
TPR.G32451 Trifolium pratense HOM05D004693 ORTHO05D005545 1.4e-64 250.4 196 63.3
Lalb_Chr21g0317811 Lupinus albus HOM05D004693 ORTHO05D005545 2.5e-64 249.6 195 64.6
MSTRG.15294 Avicennia marina HOM05D004693 ORTHO05D005545 3.2e-64 249.2 181 68.0
Peaxi162Scf00501g00318 Petunia axillaris HOM05D004693 ORTHO05D005545 3.2e-64 249.2 180 69.4
Psat3g205360 Pisum sativum HOM05D004693 ORTHO05D005545 3.2e-64 249.2 197 62.9
ECA246G3075 Erigeron canadensis HOM05D004693 ORTHO05D005545 5.5e-64 248.4 184 66.3
TPR.G9726 Trifolium pratense HOM05D004693 ORTHO05D005545 7.2e-64 248.1 198 63.1
VMungo1383G0350 Vigna mungo HOM05D004693 ORTHO05D005545 7.2e-64 248.1 201 62.2
Nitab4.5_0001217g0030 Nicotiana tabacum HOM05D004693 ORTHO05D005545 9.4e-64 247.7 202 62.9
Solyc02g086050.3 Solanum lycopersicum HOM05D004693 ORTHO05D005545 9.4e-64 247.7 237 56.1
Glyma.08G365700 Glycine max HOM05D004693 ORTHO05D005545 1.2e-63 247.3 191 63.9
PSO017G3734 Papaver somniferum HOM05D004693 ORTHO05D005545 1.6e-63 246.9 191 68.6
Solyc02g063170.3 Solanum lycopersicum HOM05D004693 ORTHO05D005545 1.6e-63 246.9 180 67.8
Ca_04048_v3 Cicer arietinum L. HOM05D004693 ORTHO05D005545 2.1e-63 246.5 232 56.9
Phvul.008G005900 Phaseolus vulgaris HOM05D004693 ORTHO05D005545 2.7e-63 246.1 190 64.2
PGSC0003DMG400024184 Solanum tuberosum HOM05D004693 ORTHO05D005545 2.7e-63 246.1 209 60.8
Sopen02g014240 Solanum pennellii HOM05D004693 ORTHO05D005545 6.1e-63 245.0 180 67.8
Lj2g0008970 Lotus japonicus HOM05D004693 ORTHO05D005545 1.4e-62 243.8 190 64.7
Potri.017G114900 Populus trichocarpa HOM05D004693 ORTHO05D005545 1.4e-62 243.8 182 70.3
CAN.G625.24 Capsicum annuum HOM05D004693 ORTHO05D005545 5.1e-62 241.9 215 60.5
Lj1g0002546 Lotus japonicus HOM05D004693 ORTHO05D005545 5.1e-62 241.9 191 63.4
Phvul.007G143200 Phaseolus vulgaris HOM05D004693 ORTHO05D005545 6.7e-62 241.5 190 64.7
Hund13716 Selenicereus undatus HOM05D004693 ORTHO05D005545 6.7e-62 241.5 180 68.3
CAN.G225.4 Capsicum annuum HOM05D004693 ORTHO05D005545 1.5e-61 240.4 209 59.8
Migut.H00217 Erythranthe guttata HOM05D004693 ORTHO05D005545 3.3e-61 239.2 166 70.5
Nitab4.5_0004398g0030 Nicotiana tabacum HOM05D004693 ORTHO05D005545 4.3e-61 238.8 201 61.7
Sed0024744 Sechium edule HOM05D004693 ORTHO05D005545 2.2e-60 236.5 179 65.9
Sed0014747 Sechium edule HOM05D004693 ORTHO05D005545 2.8e-60 236.1 233 54.1
SGA_v2.0_scaffold115G32108 Striga asiatica HOM05D000286 ORTHO05D000170 2.8e-60 236.1 178 68.0
MSTRG.23575 Avicennia marina HOM05D004693 ORTHO05D005545 4.8e-60 235.3 180 66.1
QL02p051402 Quercus lobata HOM05D004693 ORTHO05D005545 4.8e-60 235.3 147 78.9
Cc07_g08830 Coffea canephora HOM05D004693 ORTHO05D005545 1.8e-59 233.4 201 61.2
Lalb_Chr17g0335881 Lupinus albus HOM05D004693 ORTHO05D005545 3.1e-59 232.6 190 62.1
FAN13G1234 Fragaria x ananassa HOM05D004693 ORTHO05D005545 9.1e-59 231.1 223 55.6
COL.COLO4_09328 Corchorus olitorius HOM05D004693 ORTHO05D005545 1.2e-58 230.7 140 79.3
unitig_32.g11889 Utricularia gibba HOM05D004693 ORTHO05D005545 1.2e-58 230.7 179 63.1
Ah.16g101760 Amaranthus hybridus HOM05D004693 ORTHO05D005545 2.6e-58 229.6 155 74.8
AUR62009000 Chenopodium quinoa HOM05D004693 ORTHO05D005545 5.9e-58 228.4 146 76.0
Os01g0128300 Oryza sativa ssp. japonica HOM05D004693 ORTHO05D005545 1.3e-57 227.3 148 73.0
AUR62023302 Chenopodium quinoa HOM05D004693 ORTHO05D005545 1.7e-57 226.9 146 76.0
Migut.L00317 Erythranthe guttata HOM05D004693 ORTHO05D005545 2.9e-57 226.1 143 74.8
SalBow3G4509 Salvia bowleyana HOM05D004693 ORTHO05D005545 2.9e-57 226.1 151 73.5
SalBow5G5330 Salvia bowleyana HOM05D004693 ORTHO05D005545 1.1e-56 224.2 166 71.1
Nitab4.5_0000659g0050 Nicotiana tabacum HOM05D004693 ORTHO05D005545 2.5e-56 223.0 147 74.1
Zm00001eb335080 Zea mays HOM05D004693 ORTHO05D005545 2.5e-56 223.0 147 74.8
Nitab4.5_0000912g0240 Nicotiana tabacum HOM05D004693 ORTHO05D005545 5.5e-56 221.9 147 74.8
Sabra04G0080500 Salix brachista HOM05D004693 ORTHO05D005545 9.4e-56 221.1 173 66.5
PGSC0003DMG402019589 Solanum tuberosum HOM05D004693 ORTHO05D005545 4.7e-55 218.8 180 59.4
Solyc03g034240.4 Solanum lycopersicum HOM05D004693 ORTHO05D005545 6.1e-55 218.4 180 59.4
Zm00001eb125470 Zea mays HOM05D004693 ORTHO05D005545 6.1e-55 218.4 144 73.6
HPP92_021861 Vanilla planifolia HOM05D004693 ORTHO05D005545 1.8e-54 216.9 187 58.3
Sopen03g007020 Solanum pennellii HOM05D004693 ORTHO05D005545 3.0e-54 216.1 180 58.9
unitig_748.g8751 Utricularia gibba HOM05D004693 ORTHO05D005545 8.8e-54 214.5 177 61.6
Nitab4.5_0002207g0070 Nicotiana tabacum HOM05D004693 ORTHO05D005545 1.1e-53 214.2 178 60.7
EL10Ac2g04567 Beta vulgaris HOM05D004693 ORTHO05D005545 2.6e-50 203.0 188 57.4
MELO3C023805.2 Cucumis melo HOM05D004693 ORTHO05D005545 5.9e-50 201.8 121 79.3
Eucgr.F02495 Eucalyptus grandis HOM05D004693 ORTHO05D005545 1.3e-49 200.7 156 65.4
SEGI_37456 Sequoiadendron giganteum HOM05D004693 ORTHO05D005545 1.7e-49 200.3 214 52.3
Aqoxy3G00271 Aquilegia oxysepala HOM05D004693 ORTHO05D005545 6.5e-49 198.4 158 67.1
Pp3c12_21540 Physcomitrium patens HOM05D004693 ORTHO05D005545 4.2e-48 195.7 216 48.6
SMO356G0314 Selaginella moellendorffii HOM05D004693 ORTHO05D005545 1.7e-44 183.7 142 58.5
Mapoly0134s0007 Marchantia polymorpha HOM05D004693 ORTHO05D005545 2.4e-43 179.9 231 45.0
AagrBONN_evm.TU.Sc2ySwM_362.1317 Anthoceros agrestis HOM05D004693 ORTHO05D005545 7.0e-43 178.3 140 60.0
Psat1g081400 Pisum sativum HOM05D004693 ORTHO05D005545 7.0e-43 178.3 148 63.5
Pp3c3_37490 Physcomitrium patens HOM05D004693 ORTHO05D005545 9.1e-43 177.9 177 49.7
Duzib133G0419 Durio zibethinus HOM05D004693 ORTHO05D005545 1.6e-42 177.2 187 54.0
Peaxi162Scf00394g00618 Petunia axillaris HOM05D004693 ORTHO05D005545 7.7e-42 174.9 235 46.8
HanXRQChr15g0471501 Helianthus annuus HOM05D004693 ORTHO05D005545 1.0e-41 174.5 148 60.1
VMungo0464G1881 Vigna mungo HOM05D004693 ORTHO05D005545 2.2e-41 173.3 168 56.5
HPP92_000177 Vanilla planifolia HOM05D004693 ORTHO05D005545 5.0e-41 172.2 174 54.0
SGA_v2.0_scaffold33G13498 Striga asiatica HOM05D004693 ORTHO05D005545 4.2e-40 169.1 189 54.0
Cpa.g.sc282.10 Carica papaya HOM05D004693 ORTHO05D005545 9.7e-37 157.9 150 58.0
Nitab4.5_0002207g0120 Nicotiana tabacum HOM05D004693 ORTHO05D005545 1.4e-35 154.1 229 41.9
CiPaw.04G042100 Carya illinoinensis HOM05D000286 ORTHO05D000170 2.7e-34 149.8 149 57.0
CDE12G0456 Ceratophyllum demersum HOM05D001541 ORTHO05D001465 2.2e-33 146.7 208 44.2
FAN18G0638 Fragaria x ananassa HOM05D000077 ORTHO05D005545 1.0e-30 137.9 150 52.7
Phvul.004G065900 Phaseolus vulgaris HOM05D004693 ORTHO05D005545 5.4e-27 125.6 119 55.5
Peaxi162Scf00205g00220 Petunia axillaris HOM05D004693 ORTHO05D005545 7.0e-27 125.2 131 51.1
MD06G1045600 Malus domestica HOM05D004693 ORTHO05D005545 3.5e-26 122.9 160 49.4
AagrBONN_evm.TU.Sc2ySwM_362.1343 Anthoceros agrestis HOM05D004693 ORTHO05D005545 1.2e-21 107.8 120 50.0
PRCOL_00000715 Prasinoderma coloniale HOM05D004693 ORTHO05D005545 1.6e-18 97.4 141 36.2
MCO01G364 Micromonas commoda HOM05D004693 ORTHO05D005545 3.3e-16 89.7 148 34.5
MCO02G342 Micromonas commoda HOM05D004693 ORTHO05D005545 2.1e-15 87.0 129 35.7
Cre03.g207000 Chlamydomonas reinhardtii HOM05D004693 ORTHO05D005545 1.5e-13 80.9 142 37.3
Cre06.g255300 Chlamydomonas reinhardtii HOM05D004693 ORTHO05D005545 7.0e-11 72.0 152 28.3
VMungo0251G1321 Vigna mungo HOM05D000154 ORTHO05D000092 7.8e-10 68.6 83 48.2
MCO03G104 Micromonas commoda HOM05D004693 ORTHO05D005545 1.3e-09 67.8 127 30.7
PRCOL_00005350 Prasinoderma coloniale HOM05D004693 ORTHO05D005545 1.7e-09 67.4 120 30.8
Nitab4.5_0007808g0020 Nicotiana tabacum HOM05D004693 ORTHO05D005545 4.3e-08 62.8 99 38.4
PRCOL_00000440 Prasinoderma coloniale HOM05D004693 ORTHO05D005545 1.2e-07 61.2 160 29.4
Nitab4.5_0009855g0020 Nicotiana tabacum HOM05D004693 ORTHO05D005545 2.8e-07 60.1 76 48.7


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