Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g20320 Schrenkiella parvula HOM05D005855 ORTHO05D006406 0.0e+00 1417.9 822 100.0
Thhalv10018127m.g Eutrema salsugineum HOM05D005855 ORTHO05D006406 0.0e+00 1215.7 823 87.4
Aa31LG2G2480 Aethionema arabicum HOM05D005855 ORTHO05D006406 1.8e-300 1035.8 819 73.7
AL2G22160 Arabidopsis lyrata HOM05D005855 ORTHO05D006406 2.6e-299 1031.9 804 78.5
AT1G65470 Arabidopsis thaliana HOM05D005855 ORTHO05D006406 2.9e-298 1028.5 823 76.9
C06p39070 Brassica napus HOM05D005855 ORTHO05D006406 1.2e-291 1006.5 819 77.7
BolC6t38999H Brassica oleracea HOM05D005855 ORTHO05D006406 2.6e-291 1005.4 819 77.7
CARHR057120 Cardamine hirsuta HOM05D005855 ORTHO05D006406 2.2e-290 1002.3 797 76.4
Carub.0002s1120 Capsella rubella HOM05D005855 ORTHO05D006406 1.9e-289 999.2 844 72.7
BraA07t30911Z Brassica rapa HOM05D005855 ORTHO05D006406 1.5e-286 989.6 819 77.0
A07p32840 Brassica napus HOM05D005855 ORTHO05D006406 1.6e-285 986.1 817 77.1
THA.LOC104822010 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 5.5e-257 891.3 822 61.6
THA.LOC104805689 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 7.1e-257 891.0 810 67.5
Dinv17130 Davidia involucrata HOM05D005855 ORTHO05D006406 6.0e-187 658.7 808 56.1
FvH4_6g00081 Fragaria vesca HOM05D005855 ORTHO05D006406 1.3e-181 641.0 795 56.5
FAN14G2818 Fragaria x ananassa HOM05D005855 ORTHO05D006406 8.3e-181 638.3 795 56.4
QL01p051691 Quercus lobata HOM05D005855 ORTHO05D006406 3.2e-180 636.3 807 54.8
QL01p051722 Quercus lobata HOM05D005855 ORTHO05D006406 1.6e-179 634.0 807 54.6
MD12G1261700 Malus domestica HOM05D005855 ORTHO05D006406 7.3e-177 625.2 805 53.7
MELO3C008612.2 Cucumis melo HOM05D005855 ORTHO05D006406 1.6e-176 624.0 814 53.9
Prupe.6G365000 Prunus persica HOM05D005855 ORTHO05D006406 3.6e-176 622.9 803 53.1
CsaV3_2G010280 Cucumis sativus L. HOM05D005855 ORTHO05D006406 1.8e-175 620.5 814 53.6
Lalb_Chr03g0038151 Lupinus albus HOM05D005855 ORTHO05D006406 1.8e-175 620.5 831 46.3
Atru.chr2.218 Acer truncatum HOM05D005855 ORTHO05D006406 2.3e-175 620.2 812 54.2
TAR633G1091 Trochodendron aralioides HOM05D005855 ORTHO05D006406 5.2e-175 619.0 793 53.6
Potri.008G077800 Populus trichocarpa HOM05D005855 ORTHO05D006406 8.9e-175 618.2 830 54.5
Rhsim04G0133000 Rhododendron simsii HOM05D005855 ORTHO05D006406 2.0e-174 617.1 811 51.5
FAN02G1917 Fragaria x ananassa HOM05D005855 ORTHO05D006406 2.6e-174 616.7 794 54.5
Manes.13G000700 Manihot esculenta HOM05D005855 ORTHO05D006406 5.8e-174 615.5 797 55.2
CiPaw.08G111900 Carya illinoinensis HOM05D005855 ORTHO05D006406 7.5e-174 615.1 796 52.5
RcHm_v2.0_Chr3g0447421 Rosa chinensis HOM05D005855 ORTHO05D006406 3.7e-173 612.8 802 54.1
CANSAT64G2413 Cannabis sativa HOM05D005855 ORTHO05D006406 1.9e-172 610.5 804 54.5
Glyma.18G244800 Glycine max HOM05D005855 ORTHO05D006406 7.1e-172 608.6 797 49.9
Actinidia19643 Actinidia chinensis HOM05D005855 ORTHO05D006406 6.0e-171 605.5 814 52.2
TPR.G31229 Trifolium pratense HOM05D005855 ORTHO05D006406 6.0e-171 605.5 836 48.3
Gorai.002G148000 Gossypium raimondii HOM05D005855 ORTHO05D006406 7.8e-171 605.1 801 53.4
Gohir.A13G090000 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.0e-170 604.7 801 53.1
Sabra08G0057900 Salix brachista HOM05D005855 ORTHO05D006406 1.0e-170 604.7 810 54.4
FAN09G4305 Fragaria x ananassa HOM05D005855 ORTHO05D006406 5.1e-170 602.4 819 54.1
Ciclev10000302m.g Citrus clementina HOM05D005855 ORTHO05D006406 1.1e-169 601.3 797 53.8
Glyma.09G248000 Glycine max HOM05D005855 ORTHO05D006406 1.1e-169 601.3 797 51.1
Haze_04608 Corylus avellana HOM05D005855 ORTHO05D006406 1.9e-169 600.5 861 48.2
Lj8C197T11 Lonicera japonica HOM05D005855 ORTHO05D006406 3.3e-169 599.7 822 52.9
Ca_08015_v3 Cicer arietinum L. HOM05D005855 ORTHO05D006406 1.1e-167 594.7 805 47.6
ClCG11G010010 Citrullus lanatus HOM05D005855 ORTHO05D006406 1.8e-167 594.0 812 52.2
vmacro08871 Vaccinium macrocarpon HOM05D005855 ORTHO05D006406 1.8e-167 594.0 836 47.1
Peaxi162Scf00254g00712 Petunia axillaris HOM05D005855 ORTHO05D006406 8.9e-167 591.7 810 52.5
Sed0023015 Sechium edule HOM05D005855 ORTHO05D006406 2.6e-166 590.1 813 52.0
Gohir.A02G107108 Gossypium hirsutum HOM05D005855 ORTHO05D006406 2.2e-165 587.0 797 53.7
Sopen11g004450 Solanum pennellii HOM05D005855 ORTHO05D006406 2.2e-165 587.0 802 52.5
AUR62000270 Chenopodium quinoa HOM05D005855 ORTHO05D006406 3.8e-165 586.3 815 50.6
DCAR_031596 Daucus carota HOM05D005855 ORTHO05D006406 1.2e-163 581.3 797 50.4
Lj1g0024601 Lotus japonicus HOM05D005855 ORTHO05D006406 1.2e-163 581.3 795 48.4
COL.COLO4_22931 Corchorus olitorius HOM05D005855 ORTHO05D006406 1.6e-163 580.9 811 52.8
Solyc11g008670.2 Solanum lycopersicum HOM05D005855 ORTHO05D006406 1.7e-162 577.4 802 52.0
PGSC0003DMG400016248 Solanum tuberosum HOM05D005855 ORTHO05D006406 2.3e-162 577.0 804 53.0
Hund21931 Selenicereus undatus HOM05D005855 ORTHO05D006406 5.1e-162 575.9 796 50.1
Duzib177G0112 Durio zibethinus HOM05D005855 ORTHO05D006406 6.6e-162 575.5 801 53.1
Phvul.008G051800 Phaseolus vulgaris HOM05D005855 ORTHO05D006406 6.2e-160 568.9 797 46.2
Gohir.D13G093500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.1e-159 568.2 801 51.7
MD00G1017400 Malus domestica HOM05D005855 ORTHO05D006406 1.1e-159 568.2 811 50.7
Thecc.05G112200 Theobroma cacao HOM05D005855 ORTHO05D006406 1.4e-159 567.8 784 53.4
Nitab4.5_0003928g0050 Nicotiana tabacum HOM05D005855 ORTHO05D006406 9.0e-159 565.1 819 49.9
arahy.Tifrunner.gnm1.ann1.VEFL47 Arachis hypogaea HOM05D005855 ORTHO05D006406 1.2e-158 564.7 796 50.3
Nitab4.5_0001003g0160 Nicotiana tabacum HOM05D005855 ORTHO05D006406 2.6e-158 563.5 836 46.2
Gorai.003G087300 Gossypium raimondii HOM05D005855 ORTHO05D006406 3.4e-158 563.1 819 50.1
Cc09_g04110 Coffea canephora HOM05D005855 ORTHO05D006406 4.4e-158 562.8 827 48.4
CAN.G321.5 Capsicum annuum HOM05D005855 ORTHO05D006406 5.8e-158 562.4 789 53.0
TAR362G1086 Trochodendron aralioides HOM05D005855 ORTHO05D006406 5.8e-158 562.4 811 50.6
VMungo1383G1707 Vigna mungo HOM05D005855 ORTHO05D006406 1.7e-157 560.8 800 45.9
Ah.04g159310 Amaranthus hybridus HOM05D005855 ORTHO05D006406 2.9e-157 560.1 793 50.4
Aqoxy2G04154 Aquilegia oxysepala HOM05D005855 ORTHO05D006406 3.8e-157 559.7 818 45.2
Psat3g103080 Pisum sativum HOM05D005855 ORTHO05D006406 6.4e-157 558.9 828 46.3
Gohir.D03G072500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.4e-156 557.8 819 49.8
TWI18G0231 Tripterygium wilfordii HOM05D005855 ORTHO05D006406 1.4e-156 557.8 806 47.8
PGR031G3878 Punica granatum HOM05D005855 ORTHO05D006406 1.9e-156 557.4 803 50.7
ECA232G0592 Erigeron canadensis HOM05D005855 ORTHO05D006406 2.7e-155 553.5 792 50.3
MSTRG.8191 Avicennia marina HOM05D005855 ORTHO05D006406 6.6e-154 548.9 811 50.1
MBI07_g11487_MAGBIO Magnolia biondii HOM05D005855 ORTHO05D006406 1.1e-153 548.1 853 46.3
Migut.F01842 Erythranthe guttata HOM05D005855 ORTHO05D006406 8.1e-152 542.0 803 50.9
AUR62006618 Chenopodium quinoa HOM05D005855 ORTHO05D006406 5.3e-151 539.3 807 48.5
Medtr7g080500 Medicago truncatula HOM05D005855 ORTHO05D006406 2.9e-149 533.5 816 44.2
Lalb_Chr21g0311491 Lupinus albus HOM05D005855 ORTHO05D006406 2.4e-148 530.4 783 45.2
SGA_v2.0_scaffold340G49313 Striga asiatica HOM05D005855 ORTHO05D006406 1.6e-147 527.7 813 49.3
Oeu034710.1 Olea europaea HOM05D005855 ORTHO05D006406 4.6e-147 526.2 804 49.3
EL10Ac4g10026 Beta vulgaris HOM05D005855 ORTHO05D006406 1.8e-146 524.2 785 49.2
Sc16g0010640 Simmondsia chinensis HOM05D005855 ORTHO05D006406 1.8e-146 524.2 763 50.1
Eucgr.B01457 Eucalyptus grandis HOM05D005855 ORTHO05D006406 8.7e-146 521.9 676 55.5
Lsat_1_v5_gn_0_14480 Lactuca sativa HOM05D005855 ORTHO05D006406 2.1e-144 517.3 790 50.0
TWI36G1346 Tripterygium wilfordii HOM05D000941 ORTHO05D006406 2.4e-143 513.8 837 45.3
HanXRQChr16g0511741 Helianthus annuus HOM05D005855 ORTHO05D006406 6.9e-143 512.3 792 49.1
SGA_v2.0_scaffold122G33208 Striga asiatica HOM05D005855 ORTHO05D006406 7.1e-140 502.3 819 46.5
PSO017G4019 Papaver somniferum HOM05D005855 ORTHO05D006406 1.0e-138 498.4 820 47.0
Potri.002G209795 Populus trichocarpa HOM05D005855 ORTHO05D006406 1.3e-136 491.5 686 53.2
PSO573G0046 Papaver somniferum HOM05D005855 ORTHO05D006406 1.8e-135 487.6 805 46.7
Actinidia07922 Actinidia chinensis HOM05D005855 ORTHO05D006406 4.5e-126 456.4 671 49.8
unitig_749.g13497 Utricularia gibba HOM05D005855 ORTHO05D006406 1.4e-122 444.9 816 45.8
Os01g0896300 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 8.8e-122 442.2 851 45.6
QL01p051710 Quercus lobata HOM05D005855 ORTHO05D006406 1.5e-118 431.4 501 51.7
Zm00001eb365740 Zea mays HOM05D005855 ORTHO05D006406 5.5e-116 422.9 850 44.0
Actinidia31264 Actinidia chinensis HOM05D005855 ORTHO05D006406 3.0e-114 417.2 845 36.4
Oeu001220.3 Olea europaea HOM05D005855 ORTHO05D006406 5.1e-114 416.4 731 47.5
Zm00001eb144810 Zea mays HOM05D005855 ORTHO05D006406 1.5e-113 414.8 891 42.5
HPP92_024393 Vanilla planifolia HOM05D005855 ORTHO05D006406 2.1e-107 394.4 817 42.7
arahy.Tifrunner.gnm1.ann1.65FHJK Arachis hypogaea HOM05D005855 ORTHO05D006406 1.0e-98 365.5 478 47.9
ATR0743G043 Amborella trichopoda HOM05D005855 ORTHO05D006406 1.8e-98 364.8 870 39.3
CDE04G3007 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 1.3e-96 358.6 791 39.7
SEGI_12971 Sequoiadendron giganteum HOM05D005855 ORTHO05D006406 1.7e-88 331.6 845 38.7
Zm00001eb304780 Zea mays HOM05D005855 ORTHO05D006406 8.6e-85 319.3 799 35.3
CDE02G2532 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 6.6e-77 293.1 597 44.1
Cpa.g.sc88.1 Carica papaya HOM05D005855 ORTHO05D006406 5.8e-73 280.0 586 35.8
arahy.Tifrunner.gnm1.ann1.8C47BX Arachis hypogaea HOM05D005855 ORTHO05D006406 1.9e-60 238.4 495 38.4
arahy.Tifrunner.gnm1.ann1.F2WWIZ Arachis hypogaea HOM05D005855 ORTHO05D006406 1.4e-58 232.3 495 38.2
GSVIVG01007185001 Vitis vinifera HOM05D005855 ORTHO05D006406 3.4e-57 227.6 227 59.0
Os07g0273301 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 1.4e-55 222.2 460 37.2
AagrBONN_evm.TU.Sc2ySwM_344.4907 Anthoceros agrestis HOM05D005855 ORTHO05D006406 8.7e-45 186.4 849 27.4
Dinv29076 Davidia involucrata HOM05D005855 ORTHO05D006406 4.3e-44 184.1 808 25.9
Cpa.g.c37190 Carica papaya HOM05D005855 ORTHO05D006406 9.6e-44 183.0 182 54.4
SMO356G0323 Selaginella moellendorffii HOM05D005855 ORTHO05D006406 5.4e-39 167.2 467 30.2
arahy.Tifrunner.gnm1.ann1.X0XBNQ Arachis hypogaea HOM05D005855 ORTHO05D006406 3.5e-38 164.5 200 51.0
Pp3c3_24970 Physcomitrium patens HOM05D005855 ORTHO05D006406 1.5e-36 159.1 374 33.2
GSVIVG01007186001 Vitis vinifera HOM05D005855 ORTHO05D006406 5.6e-36 157.1 110 70.0
Mapoly0189s0010 Marchantia polymorpha HOM05D005855 ORTHO05D006406 2.4e-34 151.8 739 31.4
VMungo1383G0582 Vigna mungo HOM05D005855 ORTHO05D000818 4.3e-28 131.0 241 36.1
Zm00001eb310680 Zea mays HOM05D000012 ORTHO05D006406 3.2e-23 114.8 158 44.3
TPR.G32502 Trifolium pratense HOM05D005855 ORTHO05D006406 7.9e-22 110.2 227 38.3
CBR_g39948 Chara braunii HOM05D005855 ORTHO05D006406 3.9e-21 107.8 182 40.7
Zm00001eb381860 Zea mays HOM05D000012 ORTHO05D006406 1.9e-15 89.0 95 51.6
Zm00001eb367440 Zea mays HOM05D005855 ORTHO05D006406 6.3e-11 73.9 108 46.3
Nn8g40536 Nelumbo nucifera HOM05D005855 ORTHO05D006406 1.4e-07 62.8 104 40.4
Lju1034A2T22 Lonicera japonica HOM05D016202 ORTHO05D006406 4.2e-07 61.2 68 45.6
Cre12.g550152 Chlamydomonas reinhardtii HOM05D005855 ORTHO05D006406 5.5e-07 60.8 111 41.4
Ah.06g195260 Amaranthus hybridus HOM05D005855 ORTHO05D006406 1.6e-06 59.3 123 35.8
Lju1609C0G6 Lonicera japonica HOM05D016202 ORTHO05D006406 2.7e-06 58.5 63 46.0
Lju1609C0T10 Lonicera japonica HOM05D005855 ORTHO05D006406 3.6e-06 58.2 66 45.5
RcHm_v2.0_Chr5g0011851 Rosa chinensis HOM05D005855 ORTHO05D006406 3.6e-06 58.2 47 57.4


User provided reference genes

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