Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g20300 Schrenkiella parvula HOM05D008168 ORTHO05D010284 3.6e-85 318.2 157 100.0
Sp3g25580 Schrenkiella parvula HOM05D008168 ORTHO05D010284 1.6e-69 266.2 157 86.0
Dinv06690 Davidia involucrata HOM05D008168 ORTHO05D010284 4.5e-59 231.5 185 68.1
CiPaw.12G057800 Carya illinoinensis HOM05D008168 ORTHO05D010284 1.4e-57 226.5 183 68.3
Actinidia34824 Actinidia chinensis HOM05D008168 ORTHO05D010284 2.1e-56 222.6 185 65.4
Sed0019148 Sechium edule HOM05D008168 ORTHO05D010284 3.9e-55 218.4 181 66.3
Lsat_1_v5_gn_5_185960 Lactuca sativa HOM05D008168 ORTHO05D010284 6.7e-55 217.6 178 66.3
HanXRQChr08g0236051 Helianthus annuus HOM05D008168 ORTHO05D010284 1.3e-53 213.4 173 66.5
TPR.G35326 Trifolium pratense HOM05D008168 ORTHO05D010284 1.1e-52 210.3 185 64.3
HanXRQChr01g0029671 Helianthus annuus HOM05D008168 ORTHO05D010284 2.6e-51 205.7 184 62.0
Cpa.g.sc263.12 Carica papaya HOM05D008168 ORTHO05D010284 2.7e-48 195.7 161 65.8
Nitab4.5_0001761g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 2.0e-46 189.5 178 59.0
Nitab4.5_0000172g2220 Nicotiana tabacum HOM05D008168 ORTHO05D010284 2.2e-42 176.0 171 56.7
Nitab4.5_0000788g0030 Nicotiana tabacum HOM05D008168 ORTHO05D010284 2.0e-35 152.9 162 56.8
MBI05_g05357_MAGBIO Magnolia biondii HOM05D008168 ORTHO05D010284 3.8e-34 148.7 161 54.0
Gohir.A03G133725 Gossypium hirsutum HOM05D008168 ORTHO05D010284 1.0e-31 140.6 120 64.2
BraSC159t45716Z Brassica rapa HOM05D008168 ORTHO05D010284 1.8e-31 139.8 86 81.4
CAN.G1632.16 Capsicum annuum HOM05D008168 ORTHO05D010284 5.2e-31 138.3 125 62.4
CAN.G298.7 Capsicum annuum HOM05D008168 ORTHO05D010284 5.2e-31 138.3 125 62.4
AT2G07641 Arabidopsis thaliana HOM05D008168 ORTHO05D010284 8.8e-31 137.5 89 78.7
unitig_87.g27979 Utricularia gibba HOM05D008168 ORTHO05D010284 1.2e-30 137.1 125 61.6
Nitab4.5_0004030g0020 Nicotiana tabacum HOM05D008168 ORTHO05D010284 2.2e-29 132.9 121 60.3
CsaV3_6G025200 Cucumis sativus L. HOM05D008168 ORTHO05D010284 1.1e-28 130.6 120 61.7
CsaV3_6G025280 Cucumis sativus L. HOM05D008168 ORTHO05D010284 1.1e-28 130.6 120 61.7
CsaV3_6G024000 Cucumis sativus L. HOM05D008168 ORTHO05D010284 8.0e-24 114.4 68 83.8
EL10Ac7g17837 Beta vulgaris HOM05D008168 ORTHO05D010284 1.0e-23 114.0 79 70.9
RcHm_v2.0_MTg0498271 Rosa chinensis HOM05D008168 ORTHO05D010284 3.7e-21 105.5 70 77.1
Nitab4.5_0000127g0080 Nicotiana tabacum HOM05D008168 ORTHO05D010284 1.1e-20 104.0 108 55.6
MBI10_g03713_MAGBIO Magnolia biondii HOM05D008168 ORTHO05D010284 1.8e-20 103.2 92 63.0
FAN20G1169 Fragaria x ananassa HOM05D008168 ORTHO05D010284 5.4e-20 101.7 132 50.0
CDE02G1379 Ceratophyllum demersum HOM05D008168 ORTHO05D010284 1.2e-19 100.5 112 54.5
Nitab4.5_0002558g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 4.5e-19 98.6 58 82.8
Lsat_1_v5_gn_3_75761 Lactuca sativa HOM05D008168 ORTHO05D010284 7.7e-19 97.8 58 82.8
Nitab4.5_0001919g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 1.0e-18 97.4 122 51.6
AUR62043793 Chenopodium quinoa HOM05D008168 ORTHO05D010284 4.2e-17 92.0 55 83.6
AUR62043904 Chenopodium quinoa HOM05D008168 ORTHO05D010284 4.2e-17 92.0 55 83.6
AUR62043912 Chenopodium quinoa HOM05D008168 ORTHO05D010284 4.2e-17 92.0 55 83.6
Nitab4.5_0006806g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 4.2e-17 92.0 72 70.8
Thecc.08G162700 Theobroma cacao HOM05D008168 ORTHO05D010284 4.0e-15 85.5 68 63.2
FAN26G1478 Fragaria x ananassa HOM05D008168 ORTHO05D010284 5.7e-14 81.6 89 55.1
BraSC54t46354Z Brassica rapa HOM05D008168 ORTHO05D010284 7.8e-11 71.2 71 52.1


User provided reference genes

Program Settings