Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g20290 Schrenkiella parvula HOM05D000533 ORTHO05D011488 2.3e-47 191.8 91 100.0
GSVIVG01004967001 Vitis vinifera HOM05D000533 ORTHO05D011488 3.8e-26 121.3 132 53.8
Sp3g25570 Schrenkiella parvula HOM05D000533 ORTHO05D001069 1.5e-19 99.4 80 65.0
CARHR287180 Cardamine hirsuta HOM05D000533 ORTHO05D011488 1.3e-18 96.3 62 79.0
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 2.5e-17 92.0 47 93.6
RhsimMtG0002300 Rhododendron simsii HOM05D000533 ORTHO05D001069 2.5e-17 92.0 59 78.0
unitig_87.g27978 Utricularia gibba HOM05D000533 ORTHO05D011488 3.2e-17 91.7 62 75.8
SHI36143 Sapria himalayana HOM05D000533 ORTHO05D011488 4.2e-17 91.3 89 56.2
SHI51311 Sapria himalayana HOM05D000533 ORTHO05D011488 7.2e-17 90.5 113 49.6
Hma1.2p1_0386F.1_g141700 Hydrangea macrophylla HOM05D000533 ORTHO05D001069 9.3e-17 90.1 47 91.5
ATR0645G003 Amborella trichopoda HOM05D000533 ORTHO05D011488 1.6e-16 89.4 62 74.2
Lalb_Chr00c54g0413551 Lupinus albus HOM05D000533 ORTHO05D011488 1.6e-16 89.4 62 74.2
Lalb_Chr01g0010861 Lupinus albus HOM05D000533 ORTHO05D011488 1.6e-16 89.4 62 72.6
Aqoxy3G01142 Aquilegia oxysepala HOM05D000533 ORTHO05D011488 2.1e-16 89.0 62 74.2
HanXRQChr14g0434371 Helianthus annuus HOM05D000533 ORTHO05D001069 2.1e-16 89.0 62 72.6
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 2.1e-16 89.0 62 72.6
Lsat_1_v5_gn_7_67841 Lactuca sativa HOM05D000533 ORTHO05D011488 2.1e-16 89.0 62 74.2
CiPaw.12G057700 Carya illinoinensis HOM05D000533 ORTHO05D011488 3.6e-16 88.2 62 72.6
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 3.6e-16 88.2 47 89.4
Lalb_Chr00c24g0407321 Lupinus albus HOM05D000533 ORTHO05D011488 7.9e-16 87.0 48 87.5
Cpa.g.sc263.10 Carica papaya HOM05D000533 ORTHO05D011488 1.0e-15 86.7 62 72.6
CsaV3_6G023980 Cucumis sativus L. HOM05D000533 ORTHO05D011488 1.0e-15 86.7 62 72.6
CsaV3_6G025260 Cucumis sativus L. HOM05D000533 ORTHO05D011488 1.0e-15 86.7 62 72.6
CsaV3_UNG208480 Cucumis sativus L. HOM05D000533 ORTHO05D011488 1.0e-15 86.7 62 72.6
Phvul.011G124215 Phaseolus vulgaris HOM05D000533 ORTHO05D011488 1.4e-15 86.3 48 85.4
Solyc00g500183.1 Solanum lycopersicum HOM05D000533 ORTHO05D011488 3.0e-15 85.1 56 73.2
PGSC0003DMG400013204 Solanum tuberosum HOM05D000533 ORTHO05D011488 3.9e-15 84.7 48 83.3
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 5.1e-15 84.3 51 80.4
arahy.Tifrunner.gnm1.ann1.20VADI Arachis hypogaea HOM05D000533 ORTHO05D011488 6.7e-15 84.0 62 69.4
arahy.Tifrunner.gnm1.ann1.2U5581 Arachis hypogaea HOM05D000533 ORTHO05D011488 6.7e-15 84.0 62 69.4
arahy.Tifrunner.gnm1.ann1.EH7RRY Arachis hypogaea HOM05D000533 ORTHO05D011488 6.7e-15 84.0 62 69.4
SabraMtG0006600 Salix brachista HOM05D000533 ORTHO05D001069 8.8e-15 83.6 48 83.3
HanXRQChr10g0297221 Helianthus annuus HOM05D000533 ORTHO05D011488 1.1e-14 83.2 58 72.4
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 2.5e-14 82.0 47 85.1
Nn1g10104 Nelumbo nucifera HOM05D000533 ORTHO05D001069 2.5e-14 82.0 47 85.1
GSVIVG01004958001 Vitis vinifera HOM05D000533 ORTHO05D001069 3.3e-14 81.6 48 83.3
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 1.7e-13 79.3 44 84.1
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 1.7e-13 79.3 46 80.4
Glyma.14G103300 Glycine max HOM05D000533 ORTHO05D001069 4.8e-13 77.8 47 78.7
Phvul.009G072400 Phaseolus vulgaris HOM05D000533 ORTHO05D011488 4.8e-13 77.8 45 84.4
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 4.8e-13 77.8 51 74.5
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 9.1e-12 73.6 46 78.3
Cfa023038 Carpinus fangiana HOM05D000533 ORTHO05D018708 5.9e-11 70.9 57 59.6
Nitab4.5_0000859g0010 Nicotiana tabacum HOM05D000533 ORTHO05D011488 1.0e-10 70.1 69 55.1
CsaV3_6G024160 Cucumis sativus L. HOM05D000533 ORTHO05D018708 1.3e-10 69.7 57 59.6
Nitab4.5_0001034g0060 Nicotiana tabacum HOM05D000533 ORTHO05D011488 2.9e-10 68.6 81 51.9
Psat0s3560g0120 Pisum sativum HOM05D000533 ORTHO05D001069 6.5e-10 67.4 56 57.1
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 1.1e-09 66.6 43 65.1
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 2.5e-09 65.5 38 81.6
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 3.2e-09 65.1 41 68.3
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 7.2e-09 63.9 43 65.1
Lsat_1_v5_gn_7_67821 Lactuca sativa HOM05D000533 ORTHO05D001069 7.2e-09 63.9 58 56.9
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 2.1e-08 62.4 40 67.5
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 3.6e-08 61.6 34 79.4
CsaV3_UNG208510 Cucumis sativus L. HOM05D000533 ORTHO05D018708 6.1e-08 60.8 53 56.6
Nitab4.5_0015438g0010 Nicotiana tabacum HOM05D007877 ORTHO05D009957 2.3e-07 58.9 32 84.4
BolSC28t60428H Brassica oleracea HOM05D000533 ORTHO05D011488 3.0e-07 58.5 30 90.0
Pp3c7_10190 Physcomitrium patens HOM05D000533 ORTHO05D011488 9.7e-06 53.5 33 72.7


User provided reference genes

Program Settings