Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g20180 Schrenkiella parvula HOM05D004128 ORTHO05D008395 1.6e-51 206.1 127 100.0
Sp3g27700 Schrenkiella parvula HOM05D004128 ORTHO05D008395 1.7e-24 116.3 64 84.4
SpUn0012_0140 Schrenkiella parvula HOM05D000286 ORTHO05D008395 1.7e-24 116.3 66 81.8
SpUn0048_0020 Schrenkiella parvula HOM05D041219 ORTHO05D008395 1.7e-24 116.3 66 81.8
Sp7g07830 Schrenkiella parvula HOM05D000004 ORTHO05D000002 3.0e-21 105.5 67 74.6
Sp6g09630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 1.9e-12 76.3 57 63.2
BNapus_Darmor_BZH_scaffold_167p00050 Brassica napus HOM05D004128 ORTHO05D008395 3.4e-09 65.5 64 43.8
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 4.5e-09 65.1 87 41.4
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 4.5e-09 65.1 96 39.6
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 7.7e-09 64.3 86 40.7
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 7.7e-09 64.3 86 40.7
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 1.7e-08 63.2 85 40.0
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 2.2e-08 62.8 66 47.0
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 2.2e-08 62.8 66 47.0
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 2.2e-08 62.8 66 47.0
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 2.2e-08 62.8 58 51.7
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 2.2e-08 62.8 65 49.2
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 2.2e-08 62.8 85 41.2
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 2.9e-08 62.4 66 47.0
BolC4t28166H Brassica oleracea HOM05D008062 ORTHO05D008395 2.9e-08 62.4 64 42.2
BolC8t48683H Brassica oleracea HOM05D008062 ORTHO05D008395 2.9e-08 62.4 64 42.2
A02p15830 Brassica napus HOM05D008062 ORTHO05D008395 5.0e-08 61.6 63 42.9
A06p00930 Brassica napus HOM05D008062 ORTHO05D008395 5.0e-08 61.6 63 42.9
C02p45990 Brassica napus HOM05D004128 ORTHO05D008395 5.0e-08 61.6 63 42.9
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 5.0e-08 61.6 66 47.0
C03p49840 Brassica napus HOM05D004128 ORTHO05D008395 5.0e-08 61.6 63 42.9
C05p06180 Brassica napus HOM05D008062 ORTHO05D008395 5.0e-08 61.6 63 42.9
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 5.0e-08 61.6 86 39.5
BraA02t06439Z Brassica rapa HOM05D004128 ORTHO05D008395 5.0e-08 61.6 63 42.9
A09p64600 Brassica napus HOM05D004128 ORTHO05D008395 6.5e-08 61.2 63 42.9
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 6.5e-08 61.2 87 39.1
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 6.5e-08 61.2 58 48.3
A07p17770 Brassica napus HOM05D004128 ORTHO05D008395 8.5e-08 60.8 57 49.1
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 8.5e-08 60.8 57 49.1
BolC2t07481H Brassica oleracea HOM05D008062 ORTHO05D008395 8.5e-08 60.8 63 42.9
BolC2t10084H Brassica oleracea HOM05D004128 ORTHO05D008395 8.5e-08 60.8 91 34.1
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 8.5e-08 60.8 64 40.6
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 8.5e-08 60.8 93 40.9
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 8.5e-08 60.8 57 49.1
BolC9t58724H Brassica oleracea HOM05D004128 ORTHO05D008395 8.5e-08 60.8 57 49.1
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 8.5e-08 60.8 57 49.1
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 8.5e-08 60.8 57 49.1
BolC1t02375H Brassica oleracea HOM05D004128 ORTHO05D008395 1.1e-07 60.5 63 41.3
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 1.1e-07 60.5 66 47.0
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 1.9e-07 59.7 58 48.3
C06p31950 Brassica napus HOM05D004128 ORTHO05D008395 3.2e-07 58.9 55 43.6
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 3.2e-07 58.9 57 47.4
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 4.2e-07 58.5 57 47.4
C09p32150 Brassica napus HOM05D008062 ORTHO05D008395 4.2e-07 58.5 63 41.3
BolC6t38322H Brassica oleracea HOM05D004128 ORTHO05D008395 4.2e-07 58.5 83 33.7
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 4.2e-07 58.5 57 45.6
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 5.5e-07 58.2 86 39.5
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 7.2e-07 57.8 58 46.6
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-06 57.0 58 48.3
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 1.6e-06 56.6 58 48.3
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 1.6e-06 56.6 58 48.3
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 1.6e-06 56.6 58 48.3
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 1.6e-06 56.6 58 48.3
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 1.6e-06 56.6 58 48.3
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 2.1e-06 56.2 58 48.3
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 2.1e-06 56.2 58 48.3
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 2.1e-06 56.2 66 43.9
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 2.1e-06 56.2 58 48.3
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 2.7e-06 55.8 55 47.3
Carub.0093s0002 Capsella rubella HOM05D003554 ORTHO05D005130 2.7e-06 55.8 59 39.0
A01p25700 Brassica napus HOM05D008062 ORTHO05D008395 3.6e-06 55.5 63 39.7
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 3.6e-06 55.5 58 46.6
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 4.7e-06 55.1 57 43.9
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 4.7e-06 55.1 57 47.4
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 4.7e-06 55.1 58 46.6
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 4.7e-06 55.1 58 46.6
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 4.7e-06 55.1 58 46.6
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 7.9e-06 54.3 67 44.8


User provided reference genes

Program Settings