Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g20120 Schrenkiella parvula HOM05D007057 ORTHO05D008878 5.4e-160 568.9 721 100.0
C02p21340 Brassica napus HOM05D007057 ORTHO05D008878 2.6e-130 470.3 701 89.4
Thhalv10018195m.g Eutrema salsugineum HOM05D007057 ORTHO05D008878 3.7e-124 449.9 721 87.0
A02p13180 Brassica napus HOM05D007057 ORTHO05D008878 5.3e-123 446.0 721 87.7
BcaC03g14695 Brassica carinata HOM05D007057 ORTHO05D008878 9.1e-123 445.3 721 88.3
BolC2t08271H Brassica oleracea HOM05D007057 ORTHO05D008878 9.1e-123 445.3 721 88.3
AL2G22040 Arabidopsis lyrata HOM05D007057 ORTHO05D008878 3.4e-122 443.4 725 85.4
CARHR057050 Cardamine hirsuta HOM05D007057 ORTHO05D008878 3.4e-122 443.4 722 85.3
BraA02t06374Z Brassica rapa HOM05D007057 ORTHO05D008878 2.2e-121 440.7 721 87.5
Carub.0002s1110 Capsella rubella HOM05D007057 ORTHO05D008878 2.3e-118 430.6 724 86.0
BcaB05g24110 Brassica carinata HOM05D007057 ORTHO05D008878 3.9e-118 429.9 721 87.0
AT1G65380 Arabidopsis thaliana HOM05D007057 ORTHO05D008878 2.1e-111 407.5 725 82.3
THA.LOC104823816 Tarenaya hassleriana HOM05D007057 ORTHO05D008878 1.1e-99 368.6 724 77.1
Aa31LG2G2430 Aethionema arabicum HOM05D007057 ORTHO05D008878 3.8e-97 360.1 724 73.8
Manes.08G104600 Manihot esculenta HOM05D007057 ORTHO05D008878 3.3e-56 224.2 699 71.4
Haze_04538 Corylus avellana HOM05D007057 ORTHO05D008878 2.8e-55 221.1 693 64.5
Duzib128G1528 Durio zibethinus HOM05D007057 ORTHO05D008878 6.2e-55 219.9 705 69.9
Duzib177G0705 Durio zibethinus HOM05D007057 ORTHO05D008878 1.3e-52 212.2 705 67.7
Cfa006273 Carpinus fangiana HOM05D007057 ORTHO05D008878 1.4e-51 208.8 693 62.2
Glyma.18G240800 Glycine max HOM05D007057 ORTHO05D008878 1.4e-51 208.8 700 63.4
Glyma.09G251800 Glycine max HOM05D007057 ORTHO05D008878 7.1e-51 206.5 691 64.0
VMungo1383G0494 Vigna mungo HOM05D007057 ORTHO05D008878 1.3e-49 202.2 692 64.5
QL01p045590 Quercus lobata HOM05D007057 ORTHO05D008878 2.3e-49 201.4 693 62.0
CsaV3_1G044640 Cucumis sativus L. HOM05D007057 ORTHO05D008878 5.1e-49 200.3 697 65.3
MELO3C010073.2 Cucumis melo HOM05D007057 ORTHO05D008878 1.1e-48 199.1 702 65.2
TPR.G28458 Trifolium pratense HOM05D007057 ORTHO05D008878 1.5e-48 198.7 698 65.3
Potri.013G087200 Populus trichocarpa HOM05D007057 ORTHO05D008878 2.5e-48 198.0 698 68.1
Lalb_Chr19g0126731 Lupinus albus HOM05D007057 ORTHO05D008878 2.4e-46 191.4 695 65.9
ClCG03G010890 Citrullus lanatus HOM05D007057 ORTHO05D008878 6.9e-46 189.9 702 60.1
Medtr7g079550 Medicago truncatula HOM05D007057 ORTHO05D008878 9.0e-46 189.5 692 66.9
Gohir.D04G026500 Gossypium hirsutum HOM05D007057 ORTHO05D008878 2.6e-45 188.0 701 69.2
Gohir.A05G390700 Gossypium hirsutum HOM05D007057 ORTHO05D008878 5.8e-45 186.8 701 70.0
GSVIVG01019130001 Vitis vinifera HOM05D007057 ORTHO05D008878 9.9e-45 186.0 694 63.5
Thecc.05G201600 Theobroma cacao HOM05D007057 ORTHO05D008878 3.8e-44 184.1 701 66.9
Cpa.g.sc123.6 Carica papaya HOM05D007057 ORTHO05D008878 6.4e-44 183.3 224 62.1
Lj1g0009704 Lotus japonicus HOM05D007057 ORTHO05D008878 6.4e-44 183.3 700 56.7
Atru.chr10.1100 Acer truncatum HOM05D007057 ORTHO05D008878 1.1e-43 182.6 701 69.5
Eucgr.H01380 Eucalyptus grandis HOM05D007057 ORTHO05D008878 1.2e-42 179.1 709 64.2
FAN14G3263 Fragaria x ananassa HOM05D007057 ORTHO05D008878 5.1e-41 173.7 699 61.4
FAN09G2991 Fragaria x ananassa HOM05D007057 ORTHO05D008878 6.7e-41 173.3 699 61.1
PGR031G0541 Punica granatum HOM05D007057 ORTHO05D008878 8.1e-39 166.4 225 55.6
Lalb_Chr03g0038391 Lupinus albus HOM05D007057 ORTHO05D008878 2.4e-38 164.9 707 62.1
TWI18G1405 Tripterygium wilfordii HOM05D007057 ORTHO05D008878 9.0e-38 162.9 225 57.8
FvH4_6g00680 Fragaria vesca HOM05D007057 ORTHO05D008878 3.4e-37 161.0 699 59.7
Ca_07967_v3 Cicer arietinum L. HOM05D007057 ORTHO05D008878 5.8e-37 160.2 693 62.3
Prupe.6G359800 Prunus persica HOM05D007057 ORTHO05D008878 5.8e-37 160.2 225 60.4
Ciclev10013603m.g Citrus clementina HOM05D007057 ORTHO05D008878 7.6e-37 159.8 225 54.2
Sed0005007 Sechium edule HOM05D007057 ORTHO05D008878 2.9e-36 157.9 226 54.4
Psat3g104800 Pisum sativum HOM05D007057 ORTHO05D008878 1.4e-35 155.6 698 64.5
FAN05G1805 Fragaria x ananassa HOM05D007057 ORTHO05D008878 3.2e-35 154.5 699 57.2
CANSAT54G2802 Cannabis sativa HOM05D007057 ORTHO05D008878 2.1e-34 151.8 705 61.0
FAN02G0321 Fragaria x ananassa HOM05D007057 ORTHO05D008878 2.1e-34 151.8 699 57.1
Gorai.012G029100 Gossypium raimondii HOM05D007057 ORTHO05D008878 2.1e-34 151.8 701 67.3
RcHm_v2.0_Chr3g0448121 Rosa chinensis HOM05D007057 ORTHO05D008878 2.7e-34 151.4 227 52.0
Ah.04g158850 Amaranthus hybridus HOM05D007057 ORTHO05D008878 7.9e-34 149.8 709 64.3
Dinv04346 Davidia involucrata HOM05D007057 ORTHO05D008878 1.3e-33 149.1 697 63.1
CSS0046667 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 7.4e-32 143.3 227 52.4
FAN27G3162 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.6e-31 142.1 196 53.1
CiPaw.07G078900 Carya illinoinensis HOM05D007057 ORTHO05D008878 3.8e-28 131.0 568 70.2
Peaxi162Scf00976g00023 Petunia axillaris HOM05D007057 ORTHO05D008878 1.2e-26 125.9 225 53.3
Peaxi162Scf00006g00421 Petunia axillaris HOM05D007057 ORTHO05D008878 1.6e-26 125.6 226 53.1
TWI75G1373 Tripterygium wilfordii HOM05D007057 ORTHO05D008878 1.6e-26 125.6 699 64.4
FAN28G1564 Fragaria x ananassa HOM05D007057 ORTHO05D008878 4.6e-26 124.0 183 51.4
Nitab4.5_0001857g0020 Nicotiana tabacum HOM05D007057 ORTHO05D008878 7.9e-26 123.2 696 63.4
Solyc04g056640.1 Solanum lycopersicum HOM05D007057 ORTHO05D008878 7.9e-26 123.2 225 52.0
TAR362G1011 Trochodendron aralioides HOM05D007057 ORTHO05D008878 1.0e-25 122.9 688 61.5
PGSC0003DMG400010523 Solanum tuberosum HOM05D007057 ORTHO05D008878 3.9e-25 120.9 225 52.0
AUR62006672 Chenopodium quinoa HOM05D007057 ORTHO05D008878 1.1e-24 119.4 695 60.6
Sopen04g025560 Solanum pennellii HOM05D007057 ORTHO05D008878 1.5e-24 119.0 225 51.1
Nitab4.5_0000946g0060 Nicotiana tabacum HOM05D007057 ORTHO05D008878 1.9e-24 118.6 227 51.1
Rhsim03G0265600 Rhododendron simsii HOM05D007057 ORTHO05D008878 4.3e-24 117.5 227 51.1
Actinidia34764 Actinidia chinensis HOM05D007057 ORTHO05D008878 5.7e-24 117.1 677 62.9
Cc09_g03450 Coffea canephora HOM05D007057 ORTHO05D008878 2.8e-23 114.8 204 52.0
AUR62000330 Chenopodium quinoa HOM05D007057 ORTHO05D008878 4.8e-23 114.0 226 45.6
Nn4g26683 Nelumbo nucifera HOM05D007057 ORTHO05D008878 4.8e-23 114.0 695 66.8
vmacro06001 Vaccinium macrocarpon HOM05D007057 ORTHO05D008878 1.2e-21 109.4 227 49.3
COL.COLO4_27405 Corchorus olitorius HOM05D007057 ORTHO05D008878 1.5e-21 109.0 164 61.6
CAN.G217.2 Capsicum annuum HOM05D007057 ORTHO05D008878 2.0e-21 108.6 226 49.6
EL10Ac4g09982 Beta vulgaris HOM05D007057 ORTHO05D008878 2.6e-21 108.2 215 45.6
DCAR_001923 Daucus carota HOM05D007057 ORTHO05D008878 4.5e-21 107.5 225 47.1
BcaC03g14701 Brassica carinata HOM05D007057 ORTHO05D008878 2.2e-20 105.1 106 69.8
MSTRG.8219 Avicennia marina HOM05D007057 ORTHO05D008878 6.5e-20 103.6 228 45.2
Oeu010152.2 Olea europaea HOM05D007057 ORTHO05D008878 4.2e-19 100.9 222 46.8
BcaB05g24109 Brassica carinata HOM05D007057 ORTHO05D008878 7.2e-19 100.1 51 96.1
Phvul.008G055400 Phaseolus vulgaris HOM05D007057 ORTHO05D008878 2.1e-18 98.6 214 45.3
BcaC03g14697 Brassica carinata HOM05D007057 ORTHO05D008878 3.6e-18 97.8 104 66.3
BcaC03g14699 Brassica carinata HOM05D007057 ORTHO05D008878 3.0e-17 94.7 51 94.1
Migut.L01029 Erythranthe guttata HOM05D007057 ORTHO05D008878 1.1e-16 92.8 197 48.2
Aqoxy2G03299 Aquilegia oxysepala HOM05D007057 ORTHO05D008878 2.5e-16 91.7 216 47.2
Sc16g0010320 Simmondsia chinensis HOM05D007057 ORTHO05D008878 3.3e-16 91.3 193 49.7
ECA248G3256 Erigeron canadensis HOM05D007057 ORTHO05D008878 1.3e-15 89.4 201 47.3
Lsat_1_v5_gn_1_58361 Lactuca sativa HOM05D007057 ORTHO05D008878 3.7e-15 87.8 212 45.8
HanXRQChr01g0025821 Helianthus annuus HOM05D007057 ORTHO05D008878 1.1e-14 86.3 203 46.3
CSS0018282 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 2.4e-14 85.1 206 47.1
CSS0040898 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 2.4e-14 85.1 206 47.1
CSS0040779 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 4.5e-13 80.9 230 43.9
HPP92_021394 Vanilla planifolia HOM05D007057 ORTHO05D008878 2.2e-12 78.6 183 49.2
BcaB05g24107 Brassica carinata HOM05D007057 ORTHO05D008878 3.8e-12 77.8 37 97.3
PSO675G4505 Papaver somniferum HOM05D007057 ORTHO05D008878 5.0e-12 77.4 192 49.0
PSO017G0140 Papaver somniferum HOM05D007057 ORTHO05D008878 8.5e-12 76.6 191 48.7
BcaC03g14698 Brassica carinata HOM05D007057 ORTHO05D008878 1.1e-11 76.3 36 97.2
MBI08_g39972_MAGBIO Magnolia biondii HOM05D007057 ORTHO05D008878 4.2e-11 74.3 692 62.4
SGA_v2.0_scaffold71G23872 Striga asiatica HOM05D007057 ORTHO05D008878 1.6e-10 72.4 213 42.3
SalBow6G0986 Salvia bowleyana HOM05D007057 ORTHO05D008878 2.0e-08 65.5 152 38.2
AUR62000327 Chenopodium quinoa HOM05D007057 ORTHO05D008878 2.8e-07 61.6 77 44.2


User provided reference genes

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