Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g19020 Schrenkiella parvula HOM05D004230 ORTHO05D007976 2.0e-166 589.7 373 100.0
SpUn0171_0010 Schrenkiella parvula HOM05D004230 ORTHO05D007976 1.3e-98 364.4 288 70.5
BolC3t17847H Brassica oleracea HOM05D004230 ORTHO05D007976 1.1e-52 211.8 328 42.4
BcaC03g16826 Brassica carinata HOM05D004230 ORTHO05D007976 1.6e-51 208.0 305 43.6
BolC2t08696H Brassica oleracea HOM05D004230 ORTHO05D007976 4.7e-51 206.5 325 42.2
BolC6t36485H Brassica oleracea HOM05D004230 ORTHO05D007976 3.0e-50 203.8 255 48.6
C01p22920 Brassica napus HOM05D004230 ORTHO05D007976 1.5e-49 201.4 230 51.7
BraA06t24715Z Brassica rapa HOM05D004230 ORTHO05D007976 1.5e-49 201.4 229 51.5
BcaC09g52278 Brassica carinata HOM05D004230 ORTHO05D007976 4.4e-49 199.9 230 51.3
BolC1t02226H Brassica oleracea HOM05D004230 ORTHO05D007976 4.4e-49 199.9 230 51.3
C01p22970 Brassica napus HOM05D004230 ORTHO05D007976 5.7e-49 199.5 230 51.7
C01p40550 Brassica napus HOM05D004230 ORTHO05D007976 7.5e-49 199.1 247 48.6
C07p48530 Brassica napus HOM05D004230 ORTHO05D007976 1.6e-46 191.4 323 40.6
BolC7t45361H Brassica oleracea HOM05D004230 ORTHO05D007976 1.6e-46 191.4 323 40.6
BcaC07g36911 Brassica carinata HOM05D004230 ORTHO05D007976 2.7e-46 190.7 323 38.4
Sp3g24280 Schrenkiella parvula HOM05D004230 ORTHO05D007976 1.0e-45 188.7 241 49.8
BolC4t28062H Brassica oleracea HOM05D004230 ORTHO05D007976 2.2e-45 187.6 230 50.0
BolC5t30511H Brassica oleracea HOM05D004230 ORTHO05D007976 1.6e-43 181.4 248 44.8
BcaB05g23135 Brassica carinata HOM05D004230 ORTHO05D007976 3.6e-43 180.3 276 42.0
BcaB07g32180 Brassica carinata HOM05D004230 ORTHO05D007976 4.7e-43 179.9 278 43.2
C07p50550 Brassica napus HOM05D004230 ORTHO05D007976 2.3e-42 177.6 295 39.3
AL5G11160 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 5.2e-42 176.4 215 46.5
BcaB06g26529 Brassica carinata HOM05D004230 ORTHO05D007976 1.2e-41 175.3 246 44.3
C06p14020 Brassica napus HOM05D004230 ORTHO05D007976 1.5e-41 174.9 263 42.2
BraA09t39059Z Brassica rapa HOM05D004230 ORTHO05D007976 2.0e-41 174.5 320 37.5
BcaC08g43996 Brassica carinata HOM05D004230 ORTHO05D007976 2.2e-40 171.0 277 40.1
BcaC09g49449 Brassica carinata HOM05D004230 ORTHO05D007976 4.8e-40 169.9 321 38.0
C05p44100 Brassica napus HOM05D004230 ORTHO05D007976 4.8e-40 169.9 261 40.6
BraA01t02220Z Brassica rapa HOM05D004230 ORTHO05D007976 6.3e-40 169.5 263 39.5
C01p22890 Brassica napus HOM05D004230 ORTHO05D007976 1.1e-39 168.7 195 50.3
A09p35300 Brassica napus HOM05D004230 ORTHO05D007976 7.0e-39 166.0 313 37.7
BcaC05g28343 Brassica carinata HOM05D004230 ORTHO05D007976 1.6e-38 164.9 277 39.0
BcaC02g08615 Brassica carinata HOM05D004230 ORTHO05D007976 2.0e-38 164.5 227 45.8
C01p36620 Brassica napus HOM05D004230 ORTHO05D007976 3.5e-38 163.7 272 39.7
C04p52580 Brassica napus HOM05D004230 ORTHO05D007976 3.8e-37 160.2 198 49.0
BcaC03g15070 Brassica carinata HOM05D004230 ORTHO05D007976 2.1e-35 154.5 275 39.3
C08p01070 Brassica napus HOM05D004230 ORTHO05D007976 2.8e-35 154.1 217 41.5
BcaC02g09042 Brassica carinata HOM05D004230 ORTHO05D007976 4.7e-35 153.3 275 38.5
Carub.0007s3043 Capsella rubella HOM05D004230 ORTHO05D007976 1.4e-34 151.8 301 36.9
Sp1g33580 Schrenkiella parvula HOM05D004230 ORTHO05D007976 4.0e-34 150.2 132 65.9
BraA03t15403Z Brassica rapa HOM05D004230 ORTHO05D007976 1.3e-32 145.2 263 38.0
BolC1t03622H Brassica oleracea HOM05D004230 ORTHO05D007976 8.3e-32 142.5 206 42.7
A06p33150 Brassica napus HOM05D004230 ORTHO05D007976 7.0e-31 139.4 206 41.3
BcaC09g49286 Brassica carinata HOM05D004230 ORTHO05D007976 4.5e-30 136.7 175 49.1
BcaC05g25838 Brassica carinata HOM05D004230 ORTHO05D007976 7.8e-30 136.0 242 39.7
BolC5t32761H Brassica oleracea HOM05D004230 ORTHO05D007976 5.0e-29 133.3 286 32.2
BcaC01g03708 Brassica carinata HOM05D004230 ORTHO05D007976 6.6e-29 132.9 230 40.4
A06p45730 Brassica napus HOM05D004230 ORTHO05D007976 5.6e-28 129.8 305 31.1
BraA06t26555Z Brassica rapa HOM05D004230 ORTHO05D007976 5.6e-28 129.8 305 31.1
Carub.0007s3045 Capsella rubella HOM05D004230 ORTHO05D007976 1.6e-27 128.3 183 44.8
AT3G32904 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 3.0e-26 124.0 213 38.5
Sp4g09110 Schrenkiella parvula HOM05D004230 ORTHO05D000563 4.0e-26 123.6 200 38.0
BcaC05g28003 Brassica carinata HOM05D004230 ORTHO05D007976 5.2e-26 123.2 305 29.8
C05p40190 Brassica napus HOM05D004230 ORTHO05D007976 5.2e-26 123.2 305 29.8
BcaB01g00472 Brassica carinata HOM05D004230 ORTHO05D007976 6.8e-26 122.9 262 35.5
C07p53510 Brassica napus HOM05D004230 ORTHO05D027608 6.8e-26 122.9 172 45.3
C08p29240 Brassica napus HOM05D004230 ORTHO05D027608 8.9e-26 122.5 172 46.5
BolC4t25589H Brassica oleracea HOM05D004230 ORTHO05D007976 2.0e-25 121.3 95 61.1
BraA03t13046Z Brassica rapa HOM05D004230 ORTHO05D007976 2.6e-25 120.9 317 30.0
Carub.0012s0003 Capsella rubella HOM05D004230 ORTHO05D007976 2.6e-25 120.9 244 36.9
BcaB07g32504 Brassica carinata HOM05D004230 ORTHO05D007976 3.4e-25 120.6 321 30.8
C03p27680 Brassica napus HOM05D004230 ORTHO05D007976 9.8e-25 119.0 161 45.3
BcaB05g22709 Brassica carinata HOM05D004230 ORTHO05D007976 1.3e-24 118.6 228 34.2
C02p00010 Brassica napus HOM05D004230 ORTHO05D007976 1.3e-24 118.6 229 33.2
BraA06t26245Z Brassica rapa HOM05D004230 ORTHO05D007976 4.9e-24 116.7 94 59.6
BolC8t50322H Brassica oleracea HOM05D004230 ORTHO05D007976 8.3e-24 115.9 212 35.8
AL8G19300 Arabidopsis lyrata HOM05D004230 ORTHO05D000037 2.4e-23 114.4 94 63.8
Sp4g02630 Schrenkiella parvula HOM05D004230 ORTHO05D007976 2.4e-23 114.4 280 31.8
Sp2g07590 Schrenkiella parvula HOM05D004230 ORTHO05D007976 5.4e-23 113.2 178 44.4
BolC5t33361H Brassica oleracea HOM05D004230 ORTHO05D007976 1.7e-21 108.2 154 44.2
Carub.0007s3042 Capsella rubella HOM05D004230 ORTHO05D007976 1.7e-21 108.2 183 42.1
BcaB06g27526 Brassica carinata HOM05D004230 ORTHO05D007976 3.0e-21 107.5 218 33.5
BcaB04g18000 Brassica carinata HOM05D004230 ORTHO05D007976 3.9e-21 107.1 109 56.9
BolC4t26773H Brassica oleracea HOM05D004230 ORTHO05D007976 5.6e-20 103.2 92 56.5
BcaC07g39750 Brassica carinata HOM05D004230 ORTHO05D027608 2.8e-19 100.9 146 44.5
BolC8t50525H Brassica oleracea HOM05D004230 ORTHO05D027608 2.8e-19 100.9 146 44.5
Carub.0007s3044 Capsella rubella HOM05D004230 ORTHO05D007976 8.0e-19 99.4 179 39.7
AL1G50740 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 2.3e-18 97.8 88 55.7
A03p63250 Brassica napus HOM05D004230 ORTHO05D007976 5.2e-18 96.7 95 54.7
BcaC06g34422 Brassica carinata HOM05D004230 ORTHO05D007976 8.9e-18 95.9 163 35.0
C08p27070 Brassica napus HOM05D004230 ORTHO05D007976 8.9e-18 95.9 145 37.9
BolC8t46909H Brassica oleracea HOM05D004230 ORTHO05D007976 1.2e-17 95.5 92 51.1
AL8G23470 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 2.6e-17 94.4 94 53.2
AL7G44480 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 4.9e-16 90.1 215 30.7
A03p38990 Brassica napus HOM05D004230 ORTHO05D007976 6.4e-16 89.7 196 33.7
A06p20520 Brassica napus HOM05D004230 ORTHO05D007976 6.4e-16 89.7 196 33.7
BcaC09g49284 Brassica carinata HOM05D004230 ORTHO05D007976 1.1e-15 89.0 65 58.5
CARHR034450 Cardamine hirsuta HOM05D004230 ORTHO05D007976 1.1e-15 89.0 81 53.1
BcaC02g08607 Brassica carinata HOM05D004230 ORTHO05D018474 1.4e-15 88.6 175 34.9
BraA10t43214Z Brassica rapa HOM05D004230 ORTHO05D007976 1.9e-15 88.2 74 54.1
BolC3t20713H Brassica oleracea HOM05D004230 ORTHO05D007976 7.0e-15 86.3 128 43.8
C02p19260 Brassica napus HOM05D004230 ORTHO05D007976 9.2e-15 85.9 93 45.2
BolC7t42083H Brassica oleracea HOM05D004230 ORTHO05D007976 2.1e-14 84.7 93 45.2
BolC2t08058H Brassica oleracea HOM05D004230 ORTHO05D007976 2.7e-14 84.3 93 45.2
AT1G43720 Arabidopsis thaliana HOM05D004230 ORTHO05D018474 4.6e-14 83.6 146 39.0
C07p15900 Brassica napus HOM05D004230 ORTHO05D007976 6.0e-14 83.2 93 45.2
BcaC01g00380 Brassica carinata HOM05D004230 ORTHO05D007976 7.8e-14 82.8 93 45.2
AL5G20550 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 1.0e-13 82.4 134 41.8
BolC3t20706H Brassica oleracea HOM05D004230 ORTHO05D007976 1.0e-13 82.4 154 35.7
CARHR102540 Cardamine hirsuta HOM05D004230 ORTHO05D007976 3.0e-13 80.9 100 40.0
AT3G30520 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 5.1e-13 80.1 164 36.6
A01p37400 Brassica napus HOM05D004230 ORTHO05D021768 1.9e-12 78.2 69 52.2
CARHR145800 Cardamine hirsuta HOM05D004230 ORTHO05D007976 5.6e-12 76.6 169 33.7
BraA09t39106Z Brassica rapa HOM05D004230 ORTHO05D007976 4.7e-11 73.6 73 49.3
AT1G35820 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 1.4e-10 72.0 208 32.7
BolC3t18593H Brassica oleracea HOM05D004230 ORTHO05D018474 1.8e-10 71.6 156 32.1
BolC4t26781H Brassica oleracea HOM05D004230 ORTHO05D018474 1.8e-10 71.6 156 32.1
BcaC03g18110 Brassica carinata HOM05D004230 ORTHO05D007976 4.0e-10 70.5 73 46.6
BcaC01g02567 Brassica carinata HOM05D004230 ORTHO05D018474 1.5e-09 68.6 156 31.4
BraA06t25864Z Brassica rapa HOM05D004230 ORTHO05D018474 7.5e-09 66.2 146 34.2
C01p41060 Brassica napus HOM05D004230 ORTHO05D021768 1.3e-08 65.5 93 40.9
BcaC09g49285 Brassica carinata HOM05D004230 ORTHO05D032226 2.9e-08 64.3 65 49.2
A09p29770 Brassica napus HOM05D004230 ORTHO05D007976 3.7e-08 63.9 97 38.1
Sp3g29180 Schrenkiella parvula HOM05D004230 ORTHO05D007976 1.4e-07 62.0 140 30.7
C05p15560 Brassica napus HOM05D004230 ORTHO05D018474 1.9e-07 61.6 55 50.9
C01p41050 Brassica napus HOM05D004230 ORTHO05D024011 4.1e-07 60.5 59 57.6
C07p04500 Brassica napus HOM05D004230 ORTHO05D007976 4.1e-07 60.5 95 33.7
BolC1t04060H Brassica oleracea HOM05D004230 ORTHO05D024011 4.1e-07 60.5 59 57.6
A01p32030 Brassica napus HOM05D004230 ORTHO05D024011 1.6e-06 58.5 59 52.5
C07p28690 Brassica napus HOM05D004230 ORTHO05D007976 2.1e-06 58.2 43 55.8
BolC7t43407H Brassica oleracea HOM05D004230 ORTHO05D007976 2.1e-06 58.2 43 55.8
BcaB01g03013 Brassica carinata HOM05D004230 ORTHO05D007976 4.6e-06 57.0 87 34.5
BolC7t40845H Brassica oleracea HOM05D004230 ORTHO05D007976 7.8e-06 56.2 95 32.6


User provided reference genes

Program Settings