Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g17910 Schrenkiella parvula HOM05D009564 ORTHO05D012207 5.7e-124 447.6 223 100.0
BcaB04g18174 Brassica carinata HOM05D009564 ORTHO05D000016 6.2e-54 214.9 242 50.4
Sp3g27330 Schrenkiella parvula HOM05D009564 ORTHO05D012207 2.1e-41 173.3 111 76.6
BolC8t47236H Brassica oleracea HOM05D009564 ORTHO05D012207 5.8e-36 155.2 187 48.1
Sp6g09540 Schrenkiella parvula HOM05D009564 ORTHO05D012207 1.5e-28 130.6 88 73.9
Sp7g08710 Schrenkiella parvula HOM05D009564 ORTHO05D012207 3.8e-27 125.9 158 50.0
Sp1g31670 Schrenkiella parvula HOM05D006142 ORTHO05D010451 4.9e-27 125.6 144 50.0
Sp6g11360 Schrenkiella parvula HOM05D009564 ORTHO05D012207 4.9e-27 125.6 105 67.6
Sp7g10050 Schrenkiella parvula HOM05D009564 ORTHO05D012207 1.9e-26 123.6 83 77.1
BolC4t24649H Brassica oleracea HOM05D009564 ORTHO05D012207 5.4e-26 122.1 140 52.1
CARHR057870 Cardamine hirsuta HOM05D055488 ORTHO05D013527 1.7e-19 100.5 185 37.3
CARHR288340 Cardamine hirsuta HOM05D000014 ORTHO05D013527 2.2e-19 100.1 212 33.0
BcaC04g22142 Brassica carinata HOM05D009252 ORTHO05D011636 3.0e-16 89.7 213 32.9
BcaC06g35459 Brassica carinata HOM05D009252 ORTHO05D011636 5.1e-16 89.0 220 33.2
BcaC07g39937 Brassica carinata HOM05D009252 ORTHO05D011636 1.6e-14 84.0 216 31.9
CARHR259710 Cardamine hirsuta HOM05D055488 ORTHO05D013527 1.6e-14 84.0 158 34.2
BcaC04g20608 Brassica carinata HOM05D009252 ORTHO05D011636 2.4e-13 80.1 223 30.0
SpUn0003_0060 Schrenkiella parvula HOM05D009564 ORTHO05D012207 2.0e-12 77.0 55 67.3
Sp1g31010 Schrenkiella parvula HOM05D009564 ORTHO05D012207 1.0e-11 74.7 78 55.1
BcaC09g50604 Brassica carinata HOM05D009252 ORTHO05D000016 2.9e-11 73.2 98 42.9
Sp6g11460 Schrenkiella parvula HOM05D009564 ORTHO05D012207 6.5e-11 72.0 49 71.4
BcaC03g17278 Brassica carinata HOM05D000014 ORTHO05D000016 4.2e-10 69.3 98 39.8
BolC7t43453H Brassica oleracea HOM05D000014 ORTHO05D000016 4.2e-10 69.3 88 40.9
CARHR058120 Cardamine hirsuta HOM05D054837 ORTHO05D013527 4.2e-10 69.3 62 50.0
BcaC02g11008 Brassica carinata HOM05D000014 ORTHO05D000016 5.5e-10 68.9 104 38.5
BcaC03g17148 Brassica carinata HOM05D000014 ORTHO05D000016 7.1e-10 68.6 94 38.3
CARHR181670 Cardamine hirsuta HOM05D000014 ORTHO05D000016 1.6e-09 67.4 135 32.6
BcaC03g14578 Brassica carinata HOM05D000014 ORTHO05D000016 1.0e-08 64.7 104 38.5
Ca_19107_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 3.9e-08 62.8 94 31.9
BolC2t08154H Brassica oleracea HOM05D000014 ORTHO05D000016 5.1e-08 62.4 85 40.0
CARHR218430 Cardamine hirsuta HOM05D054837 ORTHO05D013527 5.1e-08 62.4 60 48.3
BolC8t49426H Brassica oleracea HOM05D009252 ORTHO05D011636 6.7e-08 62.0 168 32.1
BcaC02g10739 Brassica carinata HOM05D000014 ORTHO05D000016 8.7e-08 61.6 104 35.6
BcaC03g14796 Brassica carinata HOM05D009252 ORTHO05D000016 8.7e-08 61.6 98 36.7
BolC8t49427H Brassica oleracea HOM05D009252 ORTHO05D011636 8.7e-08 61.6 168 32.1
BolC2t08642H Brassica oleracea HOM05D009252 ORTHO05D000016 1.1e-07 61.2 83 38.6
Medtr1g050875 Medicago truncatula HOM05D000014 ORTHO05D000016 1.1e-07 61.2 84 34.5
Medtr1g050885 Medicago truncatula HOM05D000014 ORTHO05D000016 1.1e-07 61.2 84 34.5
Medtr1g050895 Medicago truncatula HOM05D000014 ORTHO05D000016 1.1e-07 61.2 84 34.5
Sp3g25990 Schrenkiella parvula HOM05D009564 ORTHO05D012207 1.1e-07 61.2 40 70.0
THA.LOC104801906 Tarenaya hassleriana HOM05D000014 ORTHO05D000093 1.1e-07 61.2 142 31.0
Medtr8g469790 Medicago truncatula HOM05D000014 ORTHO05D000016 3.3e-07 59.7 84 31.0
THA.LOC104801904 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 4.3e-07 59.3 88 35.2
THA.LOC104803157 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 4.3e-07 59.3 88 35.2
THA.LOC109116024 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 4.3e-07 59.3 88 35.2
THA.LOC109116178 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 4.3e-07 59.3 88 35.2
Aa31sc1407G10 Aethionema arabicum HOM05D000014 ORTHO05D000093 5.7e-07 58.9 82 37.8
Aa31sc1047G10 Aethionema arabicum HOM05D000014 ORTHO05D000093 1.3e-06 57.8 82 37.8
Cpa.g.sc38.6 Carica papaya HOM05D000014 ORTHO05D000016 1.6e-06 57.4 84 35.7
Ca_02250_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.1e-06 57.0 87 34.5
Ca_03175_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.1e-06 57.0 96 33.3
Aa31sc899G20 Aethionema arabicum HOM05D000014 ORTHO05D000016 3.7e-06 56.2 80 37.5
Medtr0034s0110 Medicago truncatula HOM05D000014 ORTHO05D000016 4.8e-06 55.8 75 33.3
Medtr2g461440 Medicago truncatula HOM05D000014 ORTHO05D000016 4.8e-06 55.8 117 29.1
Oeu013556.1 Olea europaea HOM05D000014 ORTHO05D000016 4.8e-06 55.8 145 29.0
THA.LOC104803350 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 4.8e-06 55.8 82 34.1
THA.LOC104809130 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 4.8e-06 55.8 78 35.9
Ca_05327_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 6.3e-06 55.5 96 32.3
Oeu018894.1 Olea europaea HOM05D000014 ORTHO05D000016 6.3e-06 55.5 80 36.2
Medtr1589s0010 Medicago truncatula HOM05D000014 ORTHO05D000016 8.2e-06 55.1 84 28.6


User provided reference genes

Program Settings