Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g17730 Schrenkiella parvula HOM05D013252 ORTHO05D371861 3.9e-148 528.1 264 100.0
Sp6g11570 Schrenkiella parvula HOM05D013252 ORTHO05D372418 3.2e-41 172.9 158 57.0
SpUn0011_0030 Schrenkiella parvula HOM05D013252 ORTHO05D000395 5.1e-31 139.0 84 79.8
SpUn0057_0030 Schrenkiella parvula HOM05D013252 ORTHO05D000395 5.1e-31 139.0 84 79.8
Sp4g05070 Schrenkiella parvula HOM05D013252 ORTHO05D371025 1.6e-29 134.0 68 88.2
Sp4g06380 Schrenkiella parvula HOM05D000074 ORTHO05D001793 7.6e-27 125.2 75 74.7
Sp4g09650 Schrenkiella parvula HOM05D013252 ORTHO05D372278 1.5e-19 100.9 124 42.7
SpUn0367_0010 Schrenkiella parvula HOM05D013252 ORTHO05D000395 4.2e-09 66.2 30 93.3
A04p09980 Brassica napus HOM05D000675 ORTHO05D021717 6.1e-08 62.4 115 32.2
BraA04t16659Z Brassica rapa HOM05D000675 ORTHO05D021717 6.1e-08 62.4 115 32.2
C05p14130 Brassica napus HOM05D000675 ORTHO05D021717 1.3e-07 61.2 115 32.2
BolC5t30144H Brassica oleracea HOM05D000675 ORTHO05D021717 1.3e-07 61.2 115 32.2
BraA04t17363Z Brassica rapa HOM05D000675 ORTHO05D003044 1.8e-07 60.8 65 40.0
BcaC01g05607 Brassica carinata HOM05D000675 ORTHO05D000395 2.3e-07 60.5 85 34.1
A05p23490 Brassica napus HOM05D000675 ORTHO05D000395 2.3e-07 60.5 65 40.0
BolC3t14837H Brassica oleracea HOM05D000675 ORTHO05D000395 2.3e-07 60.5 85 34.1
BraA05t21216Z Brassica rapa HOM05D000675 ORTHO05D000395 2.3e-07 60.5 65 40.0
BcaC08g44724 Brassica carinata HOM05D000675 ORTHO05D000395 3.0e-07 60.1 65 40.0
C06p22620 Brassica napus HOM05D000675 ORTHO05D013785 3.0e-07 60.1 65 40.0
BolC5t30672H Brassica oleracea HOM05D000675 ORTHO05D000395 3.9e-07 59.7 65 40.0
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 3.9e-07 59.7 129 28.7
BcaB01g01752 Brassica carinata HOM05D000675 ORTHO05D003044 5.1e-07 59.3 75 38.7
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 5.1e-07 59.3 86 36.0
C05p32180 Brassica napus HOM05D000675 ORTHO05D003044 5.1e-07 59.3 75 37.3
C07p04720 Brassica napus HOM05D000675 ORTHO05D003044 5.1e-07 59.3 75 37.3
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 8.7e-07 58.5 142 27.5
C06p36630 Brassica napus HOM05D000675 ORTHO05D003044 1.1e-06 58.2 71 38.0
BraA02t07854Z Brassica rapa HOM05D000675 ORTHO05D003044 1.5e-06 57.8 75 34.7
A01p19480 Brassica napus HOM05D000675 ORTHO05D003044 1.9e-06 57.4 67 37.3
C01p26930 Brassica napus HOM05D000675 ORTHO05D000395 2.5e-06 57.0 65 40.0
BolC1t02639H Brassica oleracea HOM05D000675 ORTHO05D000395 2.5e-06 57.0 65 40.0
BraA10t44620Z Brassica rapa HOM05D000675 ORTHO05D003044 2.5e-06 57.0 82 32.9
Carub.0009s0004 Capsella rubella HOM05D000675 ORTHO05D000395 2.5e-06 57.0 63 41.3
BcaC05g25609 Brassica carinata HOM05D000675 ORTHO05D021717 4.3e-06 56.2 110 31.8
C03p78170 Brassica napus HOM05D000675 ORTHO05D003044 4.3e-06 56.2 85 31.8
BolC4t27258H Brassica oleracea HOM05D000675 ORTHO05D020104 4.3e-06 56.2 65 43.1
BcaB07g31727 Brassica carinata HOM05D000675 ORTHO05D000395 9.7e-06 55.1 105 31.4
A02p36630 Brassica napus HOM05D000675 ORTHO05D003044 9.7e-06 55.1 67 37.3
A07p06060 Brassica napus HOM05D000675 ORTHO05D020104 9.7e-06 55.1 77 36.4
C04p15790 Brassica napus HOM05D000675 ORTHO05D013785 9.7e-06 55.1 61 41.0
C05p19710 Brassica napus HOM05D000675 ORTHO05D000395 9.7e-06 55.1 61 41.0
BolC2t09930H Brassica oleracea HOM05D000675 ORTHO05D000395 9.7e-06 55.1 64 39.1
BraA02t08658Z Brassica rapa HOM05D000675 ORTHO05D003044 9.7e-06 55.1 67 37.3
SpUn0365_0010 Schrenkiella parvula HOM05D011363 ORTHO05D003044 9.7e-06 55.1 88 31.8


User provided reference genes

Program Settings