Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g16480 Schrenkiella parvula HOM05D007994 ORTHO05D010092 8.3e-88 327.0 166 100.0
BcaC01g02012 Brassica carinata HOM05D007994 ORTHO05D010092 1.1e-58 230.3 174 73.0
C03p69540 Brassica napus HOM05D007994 ORTHO05D010092 1.1e-58 230.3 174 73.0
BolC3t19209H Brassica oleracea HOM05D007994 ORTHO05D010092 1.1e-58 230.3 174 73.0
A06p21760 Brassica napus HOM05D007994 ORTHO05D010092 5.2e-58 228.0 174 72.4
BraA06t25263Z Brassica rapa HOM05D007994 ORTHO05D010092 5.2e-58 228.0 174 72.4
Carub.0015s0006 Capsella rubella HOM05D007994 ORTHO05D010092 1.4e-42 176.8 166 63.3
AL5G22890 Arabidopsis lyrata HOM05D007994 ORTHO05D010092 7.6e-41 171.0 170 61.8
Carub.0005s1038 Capsella rubella HOM05D007994 ORTHO05D010092 7.6e-41 171.0 166 62.0
AT3G44716 Arabidopsis thaliana HOM05D007994 ORTHO05D010092 4.6e-38 161.8 170 59.4
CARHR151480 Cardamine hirsuta HOM05D007994 ORTHO05D010092 3.3e-36 155.6 171 57.9
BcaB01g01144 Brassica carinata HOM05D007994 ORTHO05D010092 1.6e-27 126.7 75 81.3
THA.LOC104814803 Tarenaya hassleriana HOM05D007994 ORTHO05D010092 4.2e-23 112.1 260 33.5
Migut.N02511 Erythranthe guttata HOM05D007994 ORTHO05D010092 2.2e-16 89.7 172 31.4
Solyc11g066940.2 Solanum lycopersicum HOM05D007994 ORTHO05D010092 2.9e-16 89.4 189 36.0
SalBow3G1236 Salvia bowleyana HOM05D007994 ORTHO05D010092 8.5e-16 87.8 141 36.2
Peaxi162Scf00002g05422 Petunia axillaris HOM05D007994 ORTHO05D010092 9.4e-15 84.3 149 34.9
PGSC0003DMG400026538 Solanum tuberosum HOM05D007994 ORTHO05D010092 2.1e-14 83.2 210 32.4
GSVIVG01031390001 Vitis vinifera HOM05D007994 ORTHO05D010092 4.6e-14 82.0 71 52.1
TAR623G0693 Trochodendron aralioides HOM05D007994 ORTHO05D010092 3.0e-13 79.3 99 40.4
Manes.11G158100 Manihot esculenta HOM05D007994 ORTHO05D010092 6.7e-13 78.2 71 40.8
Cfa010076 Carpinus fangiana HOM05D007994 ORTHO05D010092 1.5e-12 77.0 49 59.2
QL01p013577 Quercus lobata HOM05D007994 ORTHO05D010092 1.5e-12 77.0 106 41.5
Prupe.6G120200 Prunus persica HOM05D007994 ORTHO05D010092 3.3e-12 75.9 78 43.6
MSTRG.12356 Avicennia marina HOM05D007994 ORTHO05D010092 5.7e-12 75.1 65 47.7
CiPaw.13G140400 Carya illinoinensis HOM05D007994 ORTHO05D010092 5.7e-12 75.1 81 40.7
MD03G1135900 Malus domestica HOM05D007994 ORTHO05D010092 5.7e-12 75.1 57 49.1
Ciclev10029500m.g Citrus clementina HOM05D007994 ORTHO05D010092 7.4e-12 74.7 156 34.0
Dinv12515 Davidia involucrata HOM05D007994 ORTHO05D010092 7.4e-12 74.7 71 46.5
Eucgr.J00433 Eucalyptus grandis HOM05D007994 ORTHO05D010092 9.7e-12 74.3 52 51.9
TWI75G1300 Tripterygium wilfordii HOM05D007994 ORTHO05D010092 9.7e-12 74.3 76 42.1
Actinidia35451 Actinidia chinensis HOM05D000078 ORTHO05D010092 1.7e-11 73.6 68 45.6
Sabra09G0116600 Salix brachista HOM05D007994 ORTHO05D010092 1.7e-11 73.6 72 43.1
Duzib168G2077 Durio zibethinus HOM05D007994 ORTHO05D010092 2.2e-11 73.2 49 55.1
COL.COLO4_19306 Corchorus olitorius HOM05D007994 ORTHO05D010092 2.8e-11 72.8 47 59.6
FAN16G1405 Fragaria x ananassa HOM05D007994 ORTHO05D010092 2.8e-11 72.8 49 55.1
CANSAT54G1189 Cannabis sativa HOM05D007994 ORTHO05D010092 4.8e-11 72.0 71 45.1
Thecc.09G290600 Theobroma cacao HOM05D007994 ORTHO05D010092 4.8e-11 72.0 270 24.4
Duzib170G0069 Durio zibethinus HOM05D007994 ORTHO05D010092 6.3e-11 71.6 47 55.3
TPR.G15591 Trifolium pratense HOM05D007994 ORTHO05D010092 6.3e-11 71.6 60 48.3
vmacro14359 Vaccinium macrocarpon HOM05D007994 ORTHO05D010092 6.3e-11 71.6 49 55.1
Nn2g14036 Nelumbo nucifera HOM05D007994 ORTHO05D010092 1.1e-10 70.9 74 41.9
Gohir.A09G093700 Gossypium hirsutum HOM05D007994 ORTHO05D010092 3.1e-10 69.3 50 48.0
Gorai.006G110000 Gossypium raimondii HOM05D007994 ORTHO05D010092 3.1e-10 69.3 50 48.0
Potri.009G148200 Populus trichocarpa HOM05D007994 ORTHO05D010092 3.1e-10 69.3 74 39.2
Phvul.005G126500 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 4.1e-10 68.9 74 43.2
RcHm_v2.0_Chr5g0054991 Rosa chinensis HOM05D007994 ORTHO05D010092 4.1e-10 68.9 70 41.4
Aqoxy4G02880 Aquilegia oxysepala HOM05D007994 ORTHO05D010092 5.3e-10 68.6 67 41.8
Atru.chr3.3364 Acer truncatum HOM05D007994 ORTHO05D010092 9.1e-10 67.8 255 26.3
Cc01_g09740 Coffea canephora HOM05D007994 ORTHO05D010092 9.1e-10 67.8 49 55.1
PSO339G3278 Papaver somniferum HOM05D007994 ORTHO05D010092 1.2e-09 67.4 70 44.3
Rhsim01G0207500 Rhododendron simsii HOM05D007994 ORTHO05D010092 1.2e-09 67.4 43 55.8
Glyma.11G188500 Glycine max HOM05D007994 ORTHO05D010092 2.0e-09 66.6 102 36.3
Gohir.D09G093400 Gossypium hirsutum HOM05D007994 ORTHO05D010092 3.4e-09 65.9 50 44.0
ClCG01G012620 Citrullus lanatus HOM05D007994 ORTHO05D010092 4.5e-09 65.5 49 51.0
MELO3C004786.2 Cucumis melo HOM05D007994 ORTHO05D010092 4.5e-09 65.5 49 51.0
Oeu058281.1 Olea europaea HOM05D007994 ORTHO05D010092 4.5e-09 65.5 37 62.2
Sed0020093 Sechium edule HOM05D007994 ORTHO05D010092 4.5e-09 65.5 40 62.5
Haze_23442 Corylus avellana HOM05D007994 ORTHO05D010092 7.7e-09 64.7 66 42.4
PGR119G1356 Punica granatum HOM05D007994 ORTHO05D010092 1.0e-08 64.3 47 46.8
Phvul.011G091200 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 1.3e-08 63.9 72 40.3
VMungo1080G0008 Vigna mungo HOM05D007994 ORTHO05D010092 2.2e-08 63.2 52 51.9
Medtr4g055130 Medicago truncatula HOM05D007994 ORTHO05D010092 2.9e-08 62.8 134 32.1
VMungo1127G0625 Vigna mungo HOM05D007994 ORTHO05D010092 3.8e-08 62.4 135 28.9
CsaV3_1G014550 Cucumis sativus L. HOM05D007994 ORTHO05D010092 6.5e-08 61.6 49 46.9
ATR0820G083 Amborella trichopoda HOM05D007994 ORTHO05D010092 4.2e-07 58.9 42 47.6
Lalb_Chr19g0136731 Lupinus albus HOM05D007994 ORTHO05D010092 5.5e-07 58.5 47 48.9
PSO384G4503 Papaver somniferum HOM05D007994 ORTHO05D010092 7.2e-07 58.2 53 45.3
Lj3g0008283 Lotus japonicus HOM05D007994 ORTHO05D010092 1.2e-06 57.4 264 25.4
Sopen11g026660 Solanum pennellii HOM05D007994 ORTHO05D010092 2.1e-06 56.6 69 44.9
SEGI_15329 Sequoiadendron giganteum HOM05D007994 ORTHO05D010092 3.6e-06 55.8 68 41.2
Medtr4g053310 Medicago truncatula HOM05D007994 ORTHO05D010092 6.1e-06 55.1 37 51.4


User provided reference genes

Program Settings