Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 1.0e-85 320.1 171 100.0
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 2.8e-70 268.9 164 89.6
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 2.8e-70 268.9 164 89.6
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 2.8e-70 268.9 164 89.6
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 3.6e-70 268.5 164 89.6
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 3.6e-70 268.5 164 89.6
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 1.0e-69 266.9 164 87.8
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 3.2e-66 255.4 166 84.9
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 3.4e-60 235.3 165 80.0
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 2.4e-58 229.2 162 79.6
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 2.1e-57 226.1 164 76.8
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 6.0e-57 224.6 164 74.4
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 3.6e-54 215.3 164 72.0
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 4.9e-51 204.9 160 70.0
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 4.2e-42 175.3 169 61.5
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 4.2e-42 175.3 169 63.3
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 9.3e-42 174.1 164 62.8
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 4.6e-41 171.8 158 63.9
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 6.0e-41 171.4 130 72.3
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 2.3e-40 169.5 167 60.5
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 2.3e-40 169.5 160 61.2
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 3.0e-40 169.1 111 80.2
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 3.9e-40 168.7 167 59.9
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 5.1e-40 168.3 167 61.1
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 6.6e-40 167.9 125 71.2
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 8.7e-40 167.5 110 79.1
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 1.1e-39 167.2 144 66.0
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 1.5e-39 166.8 145 66.9
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 2.5e-39 166.0 156 63.5
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 2.5e-39 166.0 144 65.3
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 4.3e-39 165.2 165 61.8
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 9.6e-39 164.1 141 66.0
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 9.6e-39 164.1 130 71.5
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 2.8e-38 162.5 136 65.4
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 3.6e-38 162.2 113 75.2
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 3.6e-38 162.2 141 64.5
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 6.2e-38 161.4 142 65.5
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 6.2e-38 161.4 139 64.7
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 6.2e-38 161.4 121 71.1
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 6.2e-38 161.4 142 65.5
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 1.4e-37 160.2 111 74.8
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 2.4e-37 159.5 111 75.7
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 2.4e-37 159.5 126 69.8
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 3.1e-37 159.1 111 73.9
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 4.0e-37 158.7 111 73.9
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 5.3e-37 158.3 140 65.7
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 5.3e-37 158.3 113 71.7
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 5.3e-37 158.3 105 75.2
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 6.9e-37 157.9 168 61.3
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 6.9e-37 157.9 144 61.1
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 9.0e-37 157.5 134 63.4
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 1.2e-36 157.1 165 57.6
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 1.5e-36 156.8 115 73.0
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 2.0e-36 156.4 120 70.8
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 7.6e-36 154.5 115 72.2
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 1.7e-35 153.3 168 58.9
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 1.7e-35 153.3 117 73.5
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 1.7e-35 153.3 113 69.0
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 4.9e-35 151.8 170 57.1
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 4.9e-35 151.8 130 64.6
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 6.4e-35 151.4 111 70.3
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 6.4e-35 151.4 109 68.8
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 8.4e-35 151.0 166 54.8
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 8.4e-35 151.0 111 67.6
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 8.4e-35 151.0 111 67.6
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 1.9e-34 149.8 166 57.2
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 7.1e-34 147.9 164 55.5
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 2.1e-33 146.4 123 69.1
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 2.7e-33 146.0 148 57.4
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 4.6e-33 145.2 142 55.6
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 4.6e-33 145.2 121 64.5
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 3.9e-32 142.1 186 47.8
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 6.6e-32 141.4 123 61.0
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 7.3e-31 137.9 115 62.6
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 9.6e-31 137.5 97 70.1
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 1.6e-30 136.7 131 60.3
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 2.1e-30 136.3 163 52.1
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 2.8e-30 136.0 154 54.5
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 6.4e-27 124.8 113 59.3
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 1.1e-26 124.0 117 65.0
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 3.0e-24 115.9 169 49.1
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 3.0e-24 115.9 89 70.8
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 5.1e-24 115.2 127 59.1
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 6.7e-24 114.8 142 53.5
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 1.9e-23 113.2 85 74.1
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 5.6e-23 111.7 72 68.1
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 5.6e-23 111.7 85 70.6
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 7.4e-23 111.3 115 48.7
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 1.3e-22 110.5 100 69.0
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 1.6e-22 110.2 121 57.0
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 3.7e-22 109.0 124 50.0
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 1.2e-20 104.0 58 81.0
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 2.0e-20 103.2 139 51.8
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 5.8e-20 101.7 121 47.9
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 3.8e-19 99.0 110 44.5
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 1.1e-18 97.4 133 42.9
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 2.1e-17 93.2 103 53.4
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 1.5e-15 87.0 127 44.9
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 2.8e-14 82.8 140 44.3
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 2.8e-14 82.8 118 40.7
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 4.8e-14 82.0 118 40.7
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 2.9e-11 72.8 81 53.1
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 6.1e-09 65.1 120 42.5
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 4.8e-06 55.5 113 37.2


User provided reference genes

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