Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g15660 Schrenkiella parvula HOM05D007132 ORTHO05D009120 1.9e-144 515.8 251 100.0
Sp2g03890 Schrenkiella parvula HOM05D007132 ORTHO05D009120 3.1e-94 349.0 272 69.5
BcaB01g01051 Brassica carinata HOM05D007132 ORTHO05D009120 2.6e-93 345.9 275 67.3
BolC3t19289H Brassica oleracea HOM05D007132 ORTHO05D009120 9.3e-91 337.4 276 66.3
BcaC01g01945 Brassica carinata HOM05D007132 ORTHO05D009120 2.7e-90 335.9 276 65.9
C03p70370 Brassica napus HOM05D007132 ORTHO05D009120 2.5e-88 329.3 272 65.4
Thhalv10002595m.g Eutrema salsugineum HOM05D007132 ORTHO05D009120 9.6e-88 327.4 275 65.8
CARHR154210 Cardamine hirsuta HOM05D007132 ORTHO05D009120 1.3e-87 327.0 275 63.3
A06p21200 Brassica napus HOM05D007132 ORTHO05D009120 5.3e-86 321.6 276 64.1
BraA06t25207Z Brassica rapa HOM05D007132 ORTHO05D009120 1.9e-83 313.2 276 63.4
Carub.0005s1173 Capsella rubella HOM05D007132 ORTHO05D009120 1.9e-83 313.2 275 60.7
Aa31LG9G15710 Aethionema arabicum HOM05D007132 ORTHO05D009120 4.2e-83 312.0 278 62.2
AL5G24560 Arabidopsis lyrata HOM05D007132 ORTHO05D009120 9.3e-83 310.8 275 62.2
AT3G45880 Arabidopsis thaliana HOM05D007132 ORTHO05D009120 1.5e-80 303.5 275 61.5
THA.LOC104798521 Tarenaya hassleriana HOM05D007132 ORTHO05D009120 3.1e-70 269.2 268 55.6
TWI75G0244 Tripterygium wilfordii HOM05D007132 ORTHO05D009120 4.2e-59 232.3 273 48.4
Haze_08441 Corylus avellana HOM05D007132 ORTHO05D009120 9.4e-59 231.1 276 48.6
Sc01g0005800 Simmondsia chinensis HOM05D007132 ORTHO05D009120 9.4e-59 231.1 276 47.8
Manes.S095221 Manihot esculenta HOM05D007132 ORTHO05D009120 2.7e-58 229.6 274 48.2
Ciclev10031829m.g Citrus clementina HOM05D007132 ORTHO05D009120 4.6e-58 228.8 277 48.7
Cfa012869 Carpinus fangiana HOM05D007132 ORTHO05D009120 6.1e-58 228.4 277 48.0
CiPaw.11G075400 Carya illinoinensis HOM05D007132 ORTHO05D009120 7.9e-58 228.0 272 48.9
AUR62009339 Chenopodium quinoa HOM05D007132 ORTHO05D009120 1.0e-57 227.6 273 48.4
TPR.G5247 Trifolium pratense HOM05D007132 ORTHO05D009120 1.1e-56 224.2 275 45.8
Phvul.002G120400 Phaseolus vulgaris HOM05D007132 ORTHO05D009120 2.5e-56 223.0 268 46.6
Potri.001G233200 Populus trichocarpa HOM05D007132 ORTHO05D009120 3.3e-56 222.6 270 48.1
EL10Ac2g04081 Beta vulgaris HOM05D007132 ORTHO05D009120 9.7e-56 221.1 274 46.7
Gohir.D09G105701 Gossypium hirsutum HOM05D007132 ORTHO05D009120 9.7e-56 221.1 265 47.2
Gorai.006G123100 Gossypium raimondii HOM05D007132 ORTHO05D009120 9.7e-56 221.1 265 47.2
Psat2g145880 Pisum sativum HOM05D007132 ORTHO05D009120 9.7e-56 221.1 275 45.8
vmacro00083 Vaccinium macrocarpon HOM05D007132 ORTHO05D009120 1.3e-55 220.7 274 47.1
Lj2g0003748 Lotus japonicus HOM05D007132 ORTHO05D009120 1.7e-55 220.3 270 46.3
Medtr5g025190 Medicago truncatula HOM05D007132 ORTHO05D009120 1.7e-55 220.3 275 44.7
Nitab4.5_0000030g0380 Nicotiana tabacum HOM05D007132 ORTHO05D009120 1.7e-55 220.3 275 47.3
CANSAT11G0857 Cannabis sativa HOM05D007132 ORTHO05D009120 2.2e-55 219.9 276 45.7
Gohir.A09G109100 Gossypium hirsutum HOM05D007132 ORTHO05D009120 2.2e-55 219.9 265 47.2
Cpa.g.sc90.24 Carica papaya HOM05D004914 ORTHO05D006512 2.8e-55 219.5 277 48.0
Glyma.11G089600 Glycine max HOM05D007132 ORTHO05D009120 2.8e-55 219.5 271 45.8
VMungo1215G2638 Vigna mungo HOM05D007132 ORTHO05D009120 2.8e-55 219.5 268 45.9
Cc08_g05480 Coffea canephora HOM05D007132 ORTHO05D009120 3.7e-55 219.2 274 47.4
Prupe.4G147600 Prunus persica HOM05D007132 ORTHO05D009120 3.7e-55 219.2 269 46.5
MD05G1209900 Malus domestica HOM05D007132 ORTHO05D009120 6.3e-55 218.4 269 46.8
Atru.chr8.2638 Acer truncatum HOM05D007132 ORTHO05D009120 8.2e-55 218.0 274 47.1
Duzib168G0014 Durio zibethinus HOM05D007132 ORTHO05D009120 8.2e-55 218.0 271 45.8
DCAR_028364 Daucus carota HOM05D007132 ORTHO05D009120 1.1e-54 217.6 278 45.0
Nitab4.5_0004157g0010 Nicotiana tabacum HOM05D007132 ORTHO05D009120 1.1e-54 217.6 275 46.9
FAN11G4000 Fragaria x ananassa HOM05D007132 ORTHO05D009120 3.1e-54 216.1 268 46.6
Thecc.09G252800 Theobroma cacao HOM05D007132 ORTHO05D009120 3.1e-54 216.1 266 47.0
Aqoxy3G02733 Aquilegia oxysepala HOM05D007132 ORTHO05D009120 5.3e-54 215.3 281 44.8
COL.COLO4_33243 Corchorus olitorius HOM05D007132 ORTHO05D009120 5.3e-54 215.3 271 45.8
Lalb_Chr05g0215041 Lupinus albus HOM05D007132 ORTHO05D009120 5.3e-54 215.3 278 45.3
RcHm_v2.0_Chr5g0027441 Rosa chinensis HOM05D007132 ORTHO05D009120 6.9e-54 214.9 276 44.9
Eucgr.E01138 Eucalyptus grandis HOM05D007132 ORTHO05D009120 1.2e-53 214.2 279 45.2
Sabra09G0016800 Salix brachista HOM05D007132 ORTHO05D009120 1.2e-53 214.2 270 47.4
Peaxi162Scf00053g00715 Petunia axillaris HOM05D007132 ORTHO05D009120 1.5e-53 213.8 277 44.4
FvH4_3g16420 Fragaria vesca HOM05D007132 ORTHO05D009120 2.0e-53 213.4 268 45.9
Hund11034 Selenicereus undatus HOM05D007132 ORTHO05D009120 2.6e-53 213.0 274 45.6
QL12p004376 Quercus lobata HOM05D007132 ORTHO05D009120 3.4e-53 212.6 284 45.8
Solyc08g075510.4 Solanum lycopersicum HOM05D007132 ORTHO05D009120 3.4e-53 212.6 271 45.8
PGSC0003DMG400001970 Solanum tuberosum HOM05D007132 ORTHO05D009120 3.4e-53 212.6 271 46.1
Potri.009G025400 Populus trichocarpa HOM05D007132 ORTHO05D009120 1.0e-52 211.1 270 46.3
CSS0020867 Camellia sinensis var. sinensis HOM05D007132 ORTHO05D009120 1.3e-52 210.7 261 47.1
Sopen08g024160 Solanum pennellii HOM05D007132 ORTHO05D009120 1.3e-52 210.7 271 45.8
Nn1g09371 Nelumbo nucifera HOM05D007132 ORTHO05D009120 8.5e-52 208.0 286 43.7
FAN25G2365 Fragaria x ananassa HOM05D007132 ORTHO05D009120 1.9e-51 206.8 268 45.1
MBI04_g06282_MAGBIO Magnolia biondii HOM05D007132 ORTHO05D009120 1.9e-51 206.8 276 47.5
Oeu046789.1 Olea europaea HOM05D007132 ORTHO05D009120 1.9e-51 206.8 268 45.9
Nitab4.5_0000898g0130 Nicotiana tabacum HOM05D007132 ORTHO05D009120 2.5e-51 206.5 265 46.0
arahy.Tifrunner.gnm1.ann1.63YFX7 Arachis hypogaea HOM05D007132 ORTHO05D009120 5.5e-51 205.3 278 43.9
arahy.Tifrunner.gnm1.ann1.WE0KUF Arachis hypogaea HOM05D007132 ORTHO05D009120 5.5e-51 205.3 278 43.9
PGR042G0795 Punica granatum HOM05D007132 ORTHO05D009120 4.7e-50 202.2 274 46.0
CDE02G3577 Ceratophyllum demersum HOM05D007132 ORTHO05D009120 6.1e-50 201.8 271 43.5
PSO541G5430 Papaver somniferum HOM05D007132 ORTHO05D009120 7.9e-50 201.4 274 43.8
SGA_v2.0_scaffold111G31350 Striga asiatica HOM05D007132 ORTHO05D009120 1.0e-49 201.1 296 41.6
Ah.10g035250 Amaranthus hybridus HOM05D001758 ORTHO05D005969 1.4e-49 200.7 207 51.2
Lsat_1_v5_gn_6_15181 Lactuca sativa HOM05D007132 ORTHO05D009120 1.8e-49 200.3 282 42.6
Lj8A344T21 Lonicera japonica HOM05D007132 ORTHO05D009120 1.8e-49 200.3 339 39.2
Actinidia32785 Actinidia chinensis HOM05D007132 ORTHO05D009120 3.0e-49 199.5 277 44.0
CAN.G1026.1 Capsicum annuum HOM05D007132 ORTHO05D009120 5.1e-49 198.7 271 42.1
SalBow8G0736 Salvia bowleyana HOM05D007132 ORTHO05D009120 5.1e-49 198.7 272 43.0
ATR0568G089 Amborella trichopoda HOM05D007132 ORTHO05D009120 6.7e-49 198.4 278 42.1
Lj8C1T2 Lonicera japonica HOM05D007132 ORTHO05D009120 6.7e-49 198.4 339 38.6
HanXRQChr12g0382251 Helianthus annuus HOM05D007132 ORTHO05D009120 1.1e-48 197.6 275 42.2
AUR62023023 Chenopodium quinoa HOM05D007132 ORTHO05D009120 2.0e-48 196.8 254 46.1
AUR62043353 Chenopodium quinoa HOM05D007132 ORTHO05D009120 2.0e-48 196.8 254 46.1
MSTRG.1761 Avicennia marina HOM05D007132 ORTHO05D009120 1.3e-47 194.1 273 41.4
Pp3c2_13200 Physcomitrium patens HOM05D007132 ORTHO05D009120 3.2e-43 179.5 290 39.7
SEGI_38459 Sequoiadendron giganteum HOM05D007132 ORTHO05D009120 3.2e-43 179.5 270 40.0
unitig_46.g18229 Utricularia gibba HOM05D007132 ORTHO05D009120 1.8e-41 173.7 274 40.1
SMO367G0267 Selaginella moellendorffii HOM05D007132 ORTHO05D009120 8.8e-41 171.4 279 37.3
PSO675G1526 Papaver somniferum HOM05D007132 ORTHO05D009120 4.1e-38 162.5 241 41.1
AagrBONN_evm.TU.Sc2ySwM_344.2529 Anthoceros agrestis HOM05D007132 ORTHO05D009120 2.5e-35 153.3 263 37.6
Os09g0483600 Oryza sativa ssp. japonica HOM05D007132 ORTHO05D009120 3.2e-35 152.9 286 35.3
ECA233G5682 Erigeron canadensis HOM05D003740 ORTHO05D004611 2.7e-34 149.8 227 40.5
Zm00001eb316510 Zea mays HOM05D007132 ORTHO05D009120 5.2e-33 145.6 286 37.1
TAR629G3242 Trochodendron aralioides HOM05D007132 ORTHO05D009120 6.3e-31 138.7 190 42.6
Cc02_g31510 Coffea canephora HOM05D007132 ORTHO05D009120 1.8e-25 120.6 123 52.8
MCO03G301 Micromonas commoda HOM05D007132 ORTHO05D009120 1.2e-16 91.3 276 29.3
Cfa022513 Carpinus fangiana HOM05D007132 ORTHO05D009120 5.9e-13 79.0 186 30.6
Cre03.g175750 Chlamydomonas reinhardtii HOM05D007132 ORTHO05D009120 6.6e-12 75.5 89 43.8
MD10G1196200 Malus domestica HOM05D007132 ORTHO05D009120 8.6e-12 75.1 100 45.0
PRCOL_00004459 Prasinoderma coloniale HOM05D007132 ORTHO05D009120 2.5e-11 73.6 200 29.0
CDE11G0272 Ceratophyllum demersum HOM05D000435 ORTHO05D000430 2.1e-10 70.5 94 39.4
THA.LOC104816908 Tarenaya hassleriana HOM05D004419 ORTHO05D005480 1.1e-06 58.2 153 28.1
Potri.001G016200 Populus trichocarpa HOM05D004419 ORTHO05D005480 1.4e-06 57.8 177 25.4
TWI60G0085 Tripterygium wilfordii HOM05D004419 ORTHO05D005480 2.4e-06 57.0 150 24.7
Manes.06G168600 Manihot esculenta HOM05D004419 ORTHO05D005480 3.2e-06 56.6 175 26.3
ATR0605G084 Amborella trichopoda HOM05D004419 ORTHO05D005480 5.4e-06 55.8 151 27.8
Nitab4.5_0000480g0030 Nicotiana tabacum HOM05D007132 ORTHO05D009120 5.4e-06 55.8 76 40.8
CANSAT54G1224 Cannabis sativa HOM05D004419 ORTHO05D005480 9.2e-06 55.1 174 26.4
Cfa009704 Carpinus fangiana HOM05D004419 ORTHO05D005480 9.2e-06 55.1 151 24.5
Ciclev10015488m.g Citrus clementina HOM05D004419 ORTHO05D005480 9.2e-06 55.1 154 26.0
Haze_23052 Corylus avellana HOM05D004419 ORTHO05D005480 9.2e-06 55.1 151 24.5
Haze_23057 Corylus avellana HOM05D004419 ORTHO05D005480 9.2e-06 55.1 151 24.5
Sp3g18830 Schrenkiella parvula HOM05D004419 ORTHO05D005480 9.2e-06 55.1 152 26.3


User provided reference genes

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