Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g14400 Schrenkiella parvula HOM05D011101 ORTHO05D013180 8.7e-86 320.5 187 100.0
BcaB02g10698 Brassica carinata HOM05D011101 ORTHO05D013180 2.6e-69 265.8 187 83.4
Thhalv10011004m.g Eutrema salsugineum HOM05D011101 ORTHO05D013180 5.7e-69 264.6 187 84.0
CARHR156120 Cardamine hirsuta HOM05D011101 ORTHO05D013180 3.7e-68 261.9 188 82.4
BraA06t25660Z Brassica rapa HOM05D011101 ORTHO05D013180 5.9e-66 254.6 186 83.9
A06p27180 Brassica napus HOM05D011101 ORTHO05D013180 3.8e-65 251.9 186 81.7
A06p20170 Brassica napus HOM05D011101 ORTHO05D013180 1.5e-64 250.0 187 80.7
BcaB01g00919 Brassica carinata HOM05D011101 ORTHO05D013180 4.2e-64 248.4 187 75.4
BcaC01g01820 Brassica carinata HOM05D011101 ORTHO05D013180 7.2e-64 247.7 187 78.6
C03p71620 Brassica napus HOM05D011101 ORTHO05D013180 7.2e-64 247.7 187 78.6
BolC3t19453H Brassica oleracea HOM05D011101 ORTHO05D013180 7.2e-64 247.7 187 78.6
BraA06t25101Z Brassica rapa HOM05D011101 ORTHO05D013180 1.6e-63 246.5 187 80.2
AT3G47480 Arabidopsis thaliana HOM05D011101 ORTHO05D013180 2.1e-63 246.1 187 78.6
AL5G26710 Arabidopsis lyrata HOM05D011101 ORTHO05D013180 3.6e-63 245.4 185 79.5
Carub.0005s1357 Capsella rubella HOM05D011101 ORTHO05D013180 1.7e-52 209.9 162 77.2
BcaC01g02277 Brassica carinata HOM05D011101 ORTHO05D013180 2.0e-50 203.0 187 65.8
C03p67100 Brassica napus HOM05D011101 ORTHO05D013180 6.8e-38 161.4 187 57.8
BolC3t18991H Brassica oleracea HOM05D011101 ORTHO05D013180 6.8e-38 161.4 187 57.8
Actinidia35004 Actinidia chinensis HOM05D002107 ORTHO05D002067 3.5e-10 69.3 115 37.4
Cfa018931 Carpinus fangiana HOM05D002107 ORTHO05D002067 6.6e-09 65.1 110 42.7
CSS0038574 Camellia sinensis var. sinensis HOM05D002107 ORTHO05D002067 3.3e-08 62.8 113 43.4
MD06G1194700 Malus domestica HOM05D002107 ORTHO05D002067 2.1e-07 60.1 73 53.4
Actinidia19036 Actinidia chinensis HOM05D002107 ORTHO05D002067 2.8e-07 59.7 70 45.7
CSS0005295 Camellia sinensis var. sinensis HOM05D002107 ORTHO05D002067 3.6e-07 59.3 155 32.9
ClCG04G012200 Citrullus lanatus HOM05D002107 ORTHO05D002067 4.7e-07 58.9 109 46.8
Prupe.5G194800 Prunus persica HOM05D002107 ORTHO05D002067 4.7e-07 58.9 68 57.4
Sed0018974 Sechium edule HOM05D002107 ORTHO05D002067 1.1e-06 57.8 123 43.9
Haze_07315 Corylus avellana HOM05D002107 ORTHO05D002067 1.4e-06 57.4 102 46.1
Ciclev10022426m.g Citrus clementina HOM05D002107 ORTHO05D002067 1.8e-06 57.0 195 32.8
MD00G1125300 Malus domestica HOM05D002107 ORTHO05D002067 1.8e-06 57.0 77 41.6
CiPaw.05G133300 Carya illinoinensis HOM05D002107 ORTHO05D002067 2.4e-06 56.6 120 35.0
Cc04_g16480 Coffea canephora HOM05D002107 ORTHO05D002067 2.4e-06 56.6 68 39.7
Glyma.14G170400 Glycine max HOM05D002107 ORTHO05D002067 2.4e-06 56.6 69 42.0
Prupe.3G266000 Prunus persica HOM05D002107 ORTHO05D002067 2.4e-06 56.6 77 54.5
Hma1.2p1_1936F.1_g308260 Hydrangea macrophylla HOM05D002107 ORTHO05D002067 3.1e-06 56.2 121 43.8
Cpa.g.sc111.15 Carica papaya HOM05D002107 ORTHO05D002067 4.0e-06 55.8 195 35.9
Ca_18827_v3 Cicer arietinum L. HOM05D002107 ORTHO05D002067 4.0e-06 55.8 96 36.5
Ca_30086_v3 Cicer arietinum L. HOM05D002107 ORTHO05D002067 4.0e-06 55.8 96 36.5
MELO3C001988.2 Cucumis melo HOM05D002107 ORTHO05D002067 4.0e-06 55.8 140 32.1
Thecc.04G084400 Theobroma cacao HOM05D002107 ORTHO05D002067 4.0e-06 55.8 95 38.9
FAN05G5651 Fragaria x ananassa HOM05D002107 ORTHO05D002067 5.2e-06 55.5 139 38.8
Aa31LG2G4190 Aethionema arabicum HOM05D002107 ORTHO05D002067 6.8e-06 55.1 113 36.3
CSS0013301 Camellia sinensis var. sinensis HOM05D002107 ORTHO05D002067 8.9e-06 54.7 114 33.3
FvH4_5g14810 Fragaria vesca HOM05D002107 ORTHO05D002067 8.9e-06 54.7 189 37.6
Rhsim08G0154100 Rhododendron simsii HOM05D002107 ORTHO05D002067 8.9e-06 54.7 87 39.1
Solyc02g067220.4 Solanum lycopersicum HOM05D002107 ORTHO05D002067 8.9e-06 54.7 64 43.8


User provided reference genes

Program Settings