Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g14270 Schrenkiella parvula HOM05D003537 ORTHO05D004180 5.8e-63 244.2 136 100.0
A01p25800 Brassica napus HOM05D003537 ORTHO05D004180 9.6e-50 200.3 136 83.8
BraA01t02496Z Brassica rapa HOM05D003537 ORTHO05D004180 2.8e-49 198.7 136 83.1
AL5G26940 Arabidopsis lyrata HOM05D003537 ORTHO05D004180 1.5e-47 193.0 137 67.9
BolC1t03207H Brassica oleracea HOM05D003537 ORTHO05D004180 1.5e-47 193.0 136 83.1
AT3G47650 Arabidopsis thaliana HOM05D003537 ORTHO05D004180 4.5e-47 191.4 137 78.1
BcaC09g49812 Brassica carinata HOM05D003537 ORTHO05D004180 2.4e-45 185.7 136 80.9
C01p32690 Brassica napus HOM05D003537 ORTHO05D004180 2.4e-45 185.7 136 80.9
BcaB05g23065 Brassica carinata HOM05D003537 ORTHO05D004180 9.3e-45 183.7 136 79.4
CARHR156330 Cardamine hirsuta HOM05D003537 ORTHO05D004180 1.6e-44 183.0 138 76.1
Thhalv10010812m.g Eutrema salsugineum HOM05D003537 ORTHO05D004180 2.7e-44 182.2 138 81.2
Carub.0005s1378 Capsella rubella HOM05D003537 ORTHO05D004180 1.6e-41 172.9 137 76.6
BraA06t25666Z Brassica rapa HOM05D003537 ORTHO05D004180 1.8e-40 169.5 138 77.5
BcaC01g02287 Brassica carinata HOM05D003537 ORTHO05D004180 2.6e-39 165.6 140 67.9
BcaB02g10692 Brassica carinata HOM05D003537 ORTHO05D004180 1.4e-37 159.8 139 74.1
Aa31LG8G16720 Aethionema arabicum HOM05D003537 ORTHO05D004180 1.9e-37 159.5 138 63.0
BcaB01g00893 Brassica carinata HOM05D003537 ORTHO05D004180 4.2e-37 158.3 141 61.0
BcaC01g01786 Brassica carinata HOM05D003537 ORTHO05D004180 1.9e-34 149.4 140 69.3
A06p19950 Brassica napus HOM05D003537 ORTHO05D004180 1.8e-32 142.9 140 68.6
A06p27250 Brassica napus HOM05D003537 ORTHO05D004180 2.0e-31 139.4 96 86.5
BraA06t25078Z Brassica rapa HOM05D003537 ORTHO05D004180 2.0e-31 139.4 141 68.1
C03p71880 Brassica napus HOM05D003537 ORTHO05D004180 1.3e-30 136.7 140 66.4
C03p67010 Brassica napus HOM05D003537 ORTHO05D004180 5.7e-26 121.3 139 54.7
BolC3t18976H Brassica oleracea HOM05D003537 ORTHO05D004180 5.7e-26 121.3 139 54.7
THA.LOC104808988 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 9.7e-26 120.6 136 55.1
Nitab4.5_0010481g0030 Nicotiana tabacum HOM05D003537 ORTHO05D004180 1.4e-24 116.7 138 52.2
QL10p023445 Quercus lobata HOM05D003537 ORTHO05D004180 1.8e-24 116.3 138 46.4
Nitab4.5_0002658g0060 Nicotiana tabacum HOM05D003537 ORTHO05D004180 2.4e-24 115.9 138 48.6
Manes.14G132200 Manihot esculenta HOM05D003537 ORTHO05D004180 1.2e-23 113.6 141 56.0
Atru.chr7.1160 Acer truncatum HOM05D003537 ORTHO05D004180 2.0e-23 112.8 143 55.2
CiPaw.04G171200 Carya illinoinensis HOM05D003537 ORTHO05D004180 5.9e-23 111.3 143 47.6
Nn2g12030 Nelumbo nucifera HOM05D003537 ORTHO05D004180 7.6e-23 110.9 141 56.7
Peaxi162Scf00157g01525 Petunia axillaris HOM05D003537 ORTHO05D004180 7.6e-23 110.9 138 53.6
Solyc12g009440.2 Solanum lycopersicum HOM05D003537 ORTHO05D004180 1.0e-22 110.5 136 55.9
Sopen12g004440 Solanum pennellii HOM05D003537 ORTHO05D004180 1.0e-22 110.5 136 55.9
Glyma.04G147800 Glycine max HOM05D003537 ORTHO05D004180 1.3e-22 110.2 98 68.4
THA.LOC104815279 Tarenaya hassleriana HOM05D003537 ORTHO05D004180 3.8e-22 108.6 145 55.9
Cpa.g.sc75.27 Carica papaya HOM05D003537 ORTHO05D004180 5.0e-22 108.2 139 46.0
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 6.5e-22 107.8 97 72.2
HPP92_000667 Vanilla planifolia HOM05D003537 ORTHO05D004180 6.5e-22 107.8 89 71.9
Cfa003377 Carpinus fangiana HOM05D003537 ORTHO05D004180 8.5e-22 107.5 136 56.6
Manes.06G058601 Manihot esculenta HOM05D003537 ORTHO05D004180 1.1e-21 107.1 138 44.9
Duzib150G0412 Durio zibethinus HOM05D003537 ORTHO05D004180 1.9e-21 106.3 139 42.4
Oeu018469.1 Olea europaea HOM05D003537 ORTHO05D004180 1.9e-21 106.3 139 54.0
Actinidia21987 Actinidia chinensis HOM05D003537 ORTHO05D004180 3.2e-21 105.5 138 44.2
Gohir.A13G199600 Gossypium hirsutum HOM05D003537 ORTHO05D004180 3.2e-21 105.5 143 46.2
PGR142G2689 Punica granatum HOM05D003537 ORTHO05D004180 3.2e-21 105.5 139 45.3
arahy.Tifrunner.gnm1.ann1.F0XIJD Arachis hypogaea HOM05D003537 ORTHO05D004180 4.2e-21 105.1 142 49.3
Potri.018G068300 Populus trichocarpa HOM05D003537 ORTHO05D004180 4.2e-21 105.1 122 47.5
Actinidia40471 Actinidia chinensis HOM05D003537 ORTHO05D004180 5.5e-21 104.8 140 43.6
Haze_25576 Corylus avellana HOM05D003537 ORTHO05D004180 5.5e-21 104.8 136 45.6
Glyma.17G114800 Glycine max HOM05D003537 ORTHO05D004180 7.2e-21 104.4 141 43.3
TWI34G1168 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 9.4e-21 104.0 137 56.9
arahy.Tifrunner.gnm1.ann1.P86YY0 Arachis hypogaea HOM05D003537 ORTHO05D004180 1.2e-20 103.6 142 48.6
Cc06_g08500 Coffea canephora HOM05D003537 ORTHO05D004180 1.2e-20 103.6 141 42.6
Eucgr.C01175 Eucalyptus grandis HOM05D003537 ORTHO05D004180 1.6e-20 103.2 91 52.7
Gohir.D13G205100 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.6e-20 103.2 139 42.4
Gorai.013G234000 Gossypium raimondii HOM05D003537 ORTHO05D004180 1.6e-20 103.2 139 42.4
GSVIVG01015532001 Vitis vinifera HOM05D003537 ORTHO05D004180 1.6e-20 103.2 143 44.8
arahy.Tifrunner.gnm1.ann1.4IXQ36 Arachis hypogaea HOM05D003537 ORTHO05D004180 2.1e-20 102.8 144 46.5
arahy.Tifrunner.gnm1.ann1.EPB35R Arachis hypogaea HOM05D003537 ORTHO05D004180 2.1e-20 102.8 144 46.5
QL02p021910 Quercus lobata HOM05D003537 ORTHO05D004180 6.1e-20 101.3 138 44.2
Gohir.A06G055900 Gossypium hirsutum HOM05D003537 ORTHO05D004180 7.9e-20 100.9 97 53.6
Gohir.D06G054550 Gossypium hirsutum HOM05D003537 ORTHO05D004180 7.9e-20 100.9 97 53.6
TWI63G0509 Tripterygium wilfordii HOM05D003537 ORTHO05D004180 7.9e-20 100.9 136 48.5
CsaV3_2G002870 Cucumis sativus L. HOM05D003537 ORTHO05D004180 3.0e-19 99.0 146 44.5
AUR62011130 Chenopodium quinoa HOM05D003537 ORTHO05D004180 3.9e-19 98.6 141 52.5
AUR62013357 Chenopodium quinoa HOM05D003537 ORTHO05D004180 5.1e-19 98.2 141 51.8
Lalb_Chr07g0178961 Lupinus albus HOM05D003537 ORTHO05D004180 5.1e-19 98.2 137 54.0
TAR625G0117 Trochodendron aralioides HOM05D003537 ORTHO05D004180 5.1e-19 98.2 139 48.2
Dinv41510 Davidia involucrata HOM05D003537 ORTHO05D004180 6.7e-19 97.8 138 53.6
Migut.K00478 Erythranthe guttata HOM05D003537 ORTHO05D004180 6.7e-19 97.8 91 53.8
Hma1.2p1_0018F.1_g012400 Hydrangea macrophylla HOM05D003537 ORTHO05D004180 8.8e-19 97.4 147 38.8
MSTRG.21979 Avicennia marina HOM05D003537 ORTHO05D004180 1.1e-18 97.1 89 51.7
Ca_21681_v3 Cicer arietinum L. HOM05D003537 ORTHO05D004180 1.1e-18 97.1 140 43.6
SGA_v2.0_scaffold12G06124 Striga asiatica HOM05D003537 ORTHO05D004180 1.5e-18 96.7 93 49.5
CANSAT11G2285 Cannabis sativa HOM05D003537 ORTHO05D004180 1.9e-18 96.3 143 43.4
Medtr4g114180 Medicago truncatula HOM05D003537 ORTHO05D004180 1.9e-18 96.3 100 51.0
ClCG11G003050 Citrullus lanatus HOM05D003537 ORTHO05D004180 2.5e-18 95.9 100 62.0
Ciclev10009876m.g Citrus clementina HOM05D003537 ORTHO05D004180 2.5e-18 95.9 138 41.3
Phvul.003G164500 Phaseolus vulgaris HOM05D003537 ORTHO05D004180 2.5e-18 95.9 140 52.9
Sed0005083 Sechium edule HOM05D003537 ORTHO05D004180 2.5e-18 95.9 142 48.6
MD02G1031600 Malus domestica HOM05D003537 ORTHO05D004180 3.3e-18 95.5 141 44.0
Psat4g040120 Pisum sativum HOM05D003537 ORTHO05D004180 3.3e-18 95.5 101 56.4
Glyma.06G222000 Glycine max HOM05D003537 ORTHO05D004180 4.3e-18 95.1 140 52.9
MD15G1173100 Malus domestica HOM05D003537 ORTHO05D004180 4.3e-18 95.1 139 54.7
Lj4g0026965 Lotus japonicus HOM05D003537 ORTHO05D004180 5.7e-18 94.7 99 49.5
Nn8g39452 Nelumbo nucifera HOM05D003537 ORTHO05D004180 5.7e-18 94.7 139 50.4
Prupe.7G243100 Prunus persica HOM05D003537 ORTHO05D004180 9.7e-18 94.0 141 53.9
Thecc.09G126600 Theobroma cacao HOM05D003537 ORTHO05D004180 9.7e-18 94.0 139 41.7
Migut.K00479 Erythranthe guttata HOM05D003537 ORTHO05D004180 1.3e-17 93.6 91 51.6
Glyma.13G167200 Glycine max HOM05D003537 ORTHO05D004180 1.3e-17 93.6 139 42.4
Gohir.A06G143050 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.7e-17 93.2 94 51.1
Gorai.010G063900 Gossypium raimondii HOM05D003537 ORTHO05D004180 1.7e-17 93.2 97 50.5
Aqoxy7G02181 Aquilegia oxysepala HOM05D003537 ORTHO05D004180 3.7e-17 92.0 138 50.0
RcHm_v2.0_Chr2g0088401 Rosa chinensis HOM05D003537 ORTHO05D004180 3.7e-17 92.0 137 48.2
FvH4_1g03260 Fragaria vesca HOM05D003537 ORTHO05D004180 4.8e-17 91.7 107 57.9
FAN19G1671 Fragaria x ananassa HOM05D003537 ORTHO05D004180 4.8e-17 91.7 107 57.9
PSO170G5454 Papaver somniferum HOM05D003537 ORTHO05D004180 4.8e-17 91.7 144 40.3
unitig_26.g9662 Utricularia gibba HOM05D003537 ORTHO05D004180 4.8e-17 91.7 82 54.9
EL10Ac8g18657 Beta vulgaris HOM05D003537 ORTHO05D004180 6.3e-17 91.3 139 43.2
COL.COLO4_18845 Corchorus olitorius HOM05D003537 ORTHO05D004180 6.3e-17 91.3 89 51.7
FAN23G0028 Fragaria x ananassa HOM05D003537 ORTHO05D004180 6.3e-17 91.3 105 46.7
Lsat_1_v5_gn_8_58621 Lactuca sativa HOM05D003537 ORTHO05D004180 6.3e-17 91.3 82 54.9
Sabra18G0030700 Salix brachista HOM05D003537 ORTHO05D004180 6.3e-17 91.3 113 53.1
arahy.Tifrunner.gnm1.ann1.9FI3T7 Arachis hypogaea HOM05D003537 ORTHO05D004180 8.2e-17 90.9 95 49.5
ECA240G1743 Erigeron canadensis HOM05D003537 ORTHO05D004180 8.2e-17 90.9 96 58.3
FAN28G2448 Fragaria x ananassa HOM05D003537 ORTHO05D004180 8.2e-17 90.9 136 50.7
SGA_v2.0_scaffold17G08031 Striga asiatica HOM05D003537 ORTHO05D004180 8.2e-17 90.9 80 52.5
Potri.018G028500 Populus trichocarpa HOM05D003537 ORTHO05D004180 1.1e-16 90.5 113 52.2
PSO455G0045 Papaver somniferum HOM05D003537 ORTHO05D004180 1.4e-16 90.1 141 39.0
arahy.Tifrunner.gnm1.ann1.DMU7Q7 Arachis hypogaea HOM05D003537 ORTHO05D004180 1.8e-16 89.7 95 48.4
CANSAT25G1571 Cannabis sativa HOM05D003537 ORTHO05D004180 2.4e-16 89.4 80 52.5
MBI01_g36269_MAGBIO Magnolia biondii HOM05D003537 ORTHO05D004180 2.4e-16 89.4 92 66.3
Pp3c18_21980 Physcomitrium patens HOM05D003537 ORTHO05D004180 4.1e-16 88.6 82 52.4
Eucgr.C02783 Eucalyptus grandis HOM05D003537 ORTHO05D004180 6.9e-16 87.8 135 42.2
TAR636G0369 Trochodendron aralioides HOM05D003537 ORTHO05D004180 9.1e-16 87.4 139 42.4
Oeu007500.1 Olea europaea HOM05D003537 ORTHO05D004180 1.5e-15 86.7 93 63.4
VMungo1215G2386 Vigna mungo HOM05D003537 ORTHO05D004180 1.5e-15 86.7 140 48.6
ATR1120G202 Amborella trichopoda HOM05D003537 ORTHO05D004180 2.0e-15 86.3 93 46.2
TPR.G10724 Trifolium pratense HOM05D003537 ORTHO05D004180 2.6e-15 85.9 110 45.5
Lsat_1_v5_gn_7_45281 Lactuca sativa HOM05D003537 ORTHO05D004180 3.4e-15 85.5 137 41.6
Mapoly0035s0118 Marchantia polymorpha HOM05D002896 ORTHO05D003263 3.4e-15 85.5 75 61.3
HanXRQChr16g0505371 Helianthus annuus HOM05D003537 ORTHO05D004180 4.5e-15 85.1 72 56.9
Ah.14g079820 Amaranthus hybridus HOM05D003537 ORTHO05D004180 5.9e-15 84.7 142 38.0
CDE06G2093 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 5.9e-15 84.7 108 52.8
Peaxi162Scf00256g00035 Petunia axillaris HOM05D003537 ORTHO05D004180 5.9e-15 84.7 107 43.9
Haze_21529 Corylus avellana HOM05D003537 ORTHO05D004180 7.7e-15 84.3 108 42.6
CDE04G0424 Ceratophyllum demersum HOM05D003537 ORTHO05D004180 1.0e-14 84.0 82 68.3
Os06g0332800 Oryza sativa ssp. japonica HOM05D003537 ORTHO05D004180 1.0e-14 84.0 90 65.6
Rhsim01G0071100 Rhododendron simsii HOM05D003537 ORTHO05D004180 1.3e-14 83.6 137 48.9
vmacro20557 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 1.7e-14 83.2 139 49.6
Lalb_Chr13g0301861 Lupinus albus HOM05D003537 ORTHO05D004180 2.9e-14 82.4 89 64.0
ECA246G5170 Erigeron canadensis HOM05D003537 ORTHO05D004180 5.0e-14 81.6 113 38.9
Atru.BG.3.p Acer truncatum HOM05D003537 ORTHO05D004180 6.5e-14 81.3 68 54.4
Hund09242 Selenicereus undatus HOM05D003537 ORTHO05D004180 6.5e-14 81.3 93 58.1
CiPaw.08G011800 Carya illinoinensis HOM05D003537 ORTHO05D004180 8.5e-14 80.9 99 57.6
Glyma.06G069100 Glycine max HOM05D003537 ORTHO05D004180 1.4e-13 80.1 135 47.4
Psat0s2233g0360 Pisum sativum HOM05D003537 ORTHO05D004180 1.9e-13 79.7 112 42.0
SMO145G0190 Selaginella moellendorffii HOM05D003537 ORTHO05D004180 1.9e-13 79.7 69 52.2
GSVIVG01035845001 Vitis vinifera HOM05D003537 ORTHO05D004180 1.9e-13 79.7 80 66.2
RhsimUnG0194700 Rhododendron simsii HOM05D003537 ORTHO05D004180 2.5e-13 79.3 108 52.8
Dinv15950 Davidia involucrata HOM05D003537 ORTHO05D004180 3.2e-13 79.0 80 60.0
Dinv18245 Davidia involucrata HOM05D003537 ORTHO05D004180 3.2e-13 79.0 98 51.0
CsaV3_3G046470 Cucumis sativus L. HOM05D003537 ORTHO05D004180 5.5e-13 78.2 127 36.2
VMungo1309G0037 Vigna mungo HOM05D003537 ORTHO05D004180 5.5e-13 78.2 90 45.6
GSVIVG01015534001 Vitis vinifera HOM05D003537 ORTHO05D004180 9.4e-13 77.4 59 59.3
ClCG05G016980 Citrullus lanatus HOM05D003537 ORTHO05D004180 1.6e-12 76.6 82 51.2
TPR.G3106 Trifolium pratense HOM05D003537 ORTHO05D004180 1.6e-12 76.6 97 48.5
vmacro23102 Vaccinium macrocarpon HOM05D003537 ORTHO05D004180 1.6e-12 76.6 83 63.9
Cpa.g.sc259.5 Carica papaya HOM05D003537 ORTHO05D004180 2.1e-12 76.3 100 56.0
Glyma.04G067500 Glycine max HOM05D003537 ORTHO05D004180 2.1e-12 76.3 78 64.1
Manes.16G121200 Manihot esculenta HOM05D003537 ORTHO05D004180 2.1e-12 76.3 90 57.8
Thecc.09G026400 Theobroma cacao HOM05D003537 ORTHO05D004180 2.1e-12 76.3 81 64.2
Gorai.010G114400 Gossypium raimondii HOM05D003537 ORTHO05D004180 3.6e-12 75.5 81 50.6
Medtr3g107397 Medicago truncatula HOM05D003537 ORTHO05D004180 4.7e-12 75.1 141 39.7
Sed0007274 Sechium edule HOM05D003537 ORTHO05D004180 4.7e-12 75.1 73 49.3
CSS0014531 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 1.4e-11 73.6 89 41.6
HanXRQChr09g0242821 Helianthus annuus HOM05D003537 ORTHO05D004180 1.4e-11 73.6 96 59.4
Lalb_Chr08g0244061 Lupinus albus HOM05D003537 ORTHO05D004180 1.4e-11 73.6 81 60.5
Ciclev10009875m.g Citrus clementina HOM05D003537 ORTHO05D004180 1.8e-11 73.2 107 48.6
Gohir.A06G098204 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.8e-11 73.2 81 48.1
RcHm_v2.0_Chr6g0298061 Rosa chinensis HOM05D003537 ORTHO05D004180 1.8e-11 73.2 79 63.3
Lj1g0012711 Lotus japonicus HOM05D003537 ORTHO05D004180 2.3e-11 72.8 112 37.5
FAN26G0344 Fragaria x ananassa HOM05D003537 ORTHO05D004180 3.0e-11 72.4 59 57.6
Duzib168G0240 Durio zibethinus HOM05D003537 ORTHO05D004180 5.1e-11 71.6 118 38.1
Prupe.1G480000 Prunus persica HOM05D003537 ORTHO05D004180 6.7e-11 71.2 92 56.5
PGR044G0105 Punica granatum HOM05D003537 ORTHO05D004180 6.7e-11 71.2 89 58.4
SEGI_36836 Sequoiadendron giganteum HOM05D003537 ORTHO05D004180 1.1e-10 70.5 102 43.1
MD15G1124500 Malus domestica HOM05D003537 ORTHO05D004180 2.6e-10 69.3 96 38.5
FvH4_2g29200 Fragaria vesca HOM05D003537 ORTHO05D004180 3.3e-10 68.9 87 56.3
FAN15G0527 Fragaria x ananassa HOM05D003537 ORTHO05D004180 3.3e-10 68.9 122 45.9
FAN27G1347 Fragaria x ananassa HOM05D003537 ORTHO05D004180 3.3e-10 68.9 122 45.9
Cc08_g00790 Coffea canephora HOM05D003537 ORTHO05D004180 5.7e-10 68.2 128 36.7
MELO3C004506.2 Cucumis melo HOM05D003537 ORTHO05D004180 1.3e-09 67.0 154 32.5
DCAR_003091 Daucus carota HOM05D003537 ORTHO05D004180 1.3e-09 67.0 62 51.6
SalBow1G5494 Salvia bowleyana HOM05D003537 ORTHO05D004180 1.3e-09 67.0 66 50.0
Lsat_1_v5_gn_5_30800 Lactuca sativa HOM05D003537 ORTHO05D004180 1.1e-08 63.9 59 54.2
Gohir.D08G087900 Gossypium hirsutum HOM05D003537 ORTHO05D004180 2.0e-07 59.7 59 50.8
Gohir.A10G061300 Gossypium hirsutum HOM05D003537 ORTHO05D004180 1.3e-06 57.0 31 77.4
FAN24G0346 Fragaria x ananassa HOM05D003537 ORTHO05D004180 3.8e-06 55.5 53 50.9
CSS0006865 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 6.5e-06 54.7 31 67.7
CSS0026750 Camellia sinensis var. sinensis HOM05D003537 ORTHO05D004180 6.5e-06 54.7 31 67.7


User provided reference genes

Program Settings