Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g14120 Schrenkiella parvula HOM05D007939 ORTHO05D010027 2.0e-25 118.2 58 100.0
AL5G27140 Arabidopsis lyrata HOM05D007939 ORTHO05D010027 1.0e-24 115.9 58 96.6
Thhalv10010893m.g Eutrema salsugineum HOM05D007939 ORTHO05D010027 8.6e-24 112.8 58 96.6
CARHR156540 Cardamine hirsuta HOM05D007939 ORTHO05D010027 1.9e-23 111.7 58 93.1
C03p72070 Brassica napus HOM05D007939 ORTHO05D010027 2.5e-23 111.3 58 94.8
BolC3t19505H Brassica oleracea HOM05D007939 ORTHO05D010027 2.5e-23 111.3 58 94.8
BraA06t25058Z Brassica rapa HOM05D007939 ORTHO05D010027 2.5e-23 111.3 58 94.8
BcaB01g00871 Brassica carinata HOM05D007939 ORTHO05D010027 4.7e-22 107.1 58 91.4
Carub.0005s1396 Capsella rubella HOM05D007939 ORTHO05D010027 8.9e-21 102.8 58 87.9
Prupe.5G181400 Prunus persica HOM05D007939 ORTHO05D010027 4.1e-18 94.0 55 80.0
Cfa019042 Carpinus fangiana HOM05D007939 ORTHO05D010027 1.2e-17 92.4 55 76.4
BcaC01g01771 Brassica carinata HOM05D007939 ORTHO05D010027 4.6e-17 90.5 45 95.6
Ciclev10023252m.g Citrus clementina HOM05D007939 ORTHO05D010027 4.6e-17 90.5 55 74.5
Nn4g22962 Nelumbo nucifera HOM05D007939 ORTHO05D010027 6.0e-17 90.1 58 72.4
Atru.chr9.2381 Acer truncatum HOM05D007939 ORTHO05D010027 7.8e-17 89.7 55 78.2
Nn3g17057 Nelumbo nucifera HOM05D007939 ORTHO05D010027 7.8e-17 89.7 58 72.4
RcHm_v2.0_Chr7g0179931 Rosa chinensis HOM05D007939 ORTHO05D010027 1.3e-16 89.0 53 73.6
DCAR_021553 Daucus carota HOM05D007939 ORTHO05D010027 1.7e-16 88.6 55 72.7
Rhsim08G0164200 Rhododendron simsii HOM05D007939 ORTHO05D010027 1.7e-16 88.6 51 78.4
Potri.012G074300 Populus trichocarpa HOM05D007939 ORTHO05D010027 2.3e-16 88.2 55 72.7
Sed0024093 Sechium edule HOM05D007939 ORTHO05D010027 3.0e-16 87.8 55 70.9
CiPaw.11G033900 Carya illinoinensis HOM05D007939 ORTHO05D010027 3.9e-16 87.4 54 74.1
Aa31LG4G16500 Aethionema arabicum HOM05D007939 ORTHO05D010027 6.6e-16 86.7 45 91.1
BcaB02g10687 Brassica carinata HOM05D007939 ORTHO05D010027 6.6e-16 86.7 45 88.9
CsaV3_1G008140 Cucumis sativus L. HOM05D007939 ORTHO05D010027 8.6e-16 86.3 55 70.9
Manes.14G071800 Manihot esculenta HOM05D007939 ORTHO05D010027 1.1e-15 85.9 55 70.9
Haze_07419 Corylus avellana HOM05D007939 ORTHO05D010027 1.9e-15 85.1 49 75.5
Gohir.A12G276700 Gossypium hirsutum HOM05D007939 ORTHO05D010027 1.9e-15 85.1 55 72.7
Gohir.D12G277700 Gossypium hirsutum HOM05D007939 ORTHO05D010027 1.9e-15 85.1 55 72.7
Gorai.008G298400 Gossypium raimondii HOM05D007939 ORTHO05D010027 1.9e-15 85.1 55 72.7
MD14G1189000 Malus domestica HOM05D007939 ORTHO05D010027 1.9e-15 85.1 58 69.0
Lsat_1_v5_gn_4_74421 Lactuca sativa HOM05D007939 ORTHO05D010027 2.5e-15 84.7 55 69.1
Thecc.03G001700 Theobroma cacao HOM05D007939 ORTHO05D010027 2.5e-15 84.7 57 68.4
Lj9A455T57 Lonicera japonica HOM05D007939 ORTHO05D010027 3.3e-15 84.3 55 69.1
C03p66950 Brassica napus HOM05D007939 ORTHO05D010027 4.3e-15 84.0 52 76.9
CSS0025662 Camellia sinensis var. sinensis HOM05D007939 ORTHO05D010027 5.6e-15 83.6 45 82.2
Glyma.05G032500 Glycine max HOM05D007939 ORTHO05D010027 5.6e-15 83.6 55 70.9
SalBow3G2524 Salvia bowleyana HOM05D007939 ORTHO05D010027 9.5e-15 82.8 57 66.7
BolC3t18968H Brassica oleracea HOM05D007939 ORTHO05D010027 1.6e-14 82.0 45 84.4
CSS0005245 Camellia sinensis var. sinensis HOM05D007939 ORTHO05D010027 1.6e-14 82.0 45 80.0
Lj4g0008013 Lotus japonicus HOM05D007939 ORTHO05D010027 1.6e-14 82.0 55 69.1
Rhsim12G0160700 Rhododendron simsii HOM05D007939 ORTHO05D010027 1.6e-14 82.0 54 72.2
Hund02701 Selenicereus undatus HOM05D007939 ORTHO05D010027 1.6e-14 82.0 55 69.1
ClCG01G014170 Citrullus lanatus HOM05D007939 ORTHO05D010027 2.1e-14 81.6 45 82.2
MELO3C002231.2 Cucumis melo HOM05D007939 ORTHO05D010027 2.1e-14 81.6 45 82.2
Cc04_g16150 Coffea canephora HOM05D007939 ORTHO05D010027 2.8e-14 81.3 58 67.2
Lalb_Chr13g0298021 Lupinus albus HOM05D007939 ORTHO05D010027 4.7e-14 80.5 55 65.5
Solyc03g113670.4 Solanum lycopersicum HOM05D007939 ORTHO05D010027 4.7e-14 80.5 50 68.0
Oeu041591.1 Olea europaea HOM05D007939 ORTHO05D010027 6.2e-14 80.1 50 76.0
Phvul.003G196000 Phaseolus vulgaris HOM05D007939 ORTHO05D010027 6.2e-14 80.1 55 69.1
Sabra12G0052700 Salix brachista HOM05D007939 ORTHO05D010027 6.2e-14 80.1 45 80.0
COL.COLO4_05795 Corchorus olitorius HOM05D007939 ORTHO05D010027 8.1e-14 79.7 45 77.8
HanXRQChr09g0271581 Helianthus annuus HOM05D007939 ORTHO05D010027 1.4e-13 79.0 55 67.3
PSO591G0029 Papaver somniferum HOM05D007939 ORTHO05D010027 1.4e-13 79.0 54 68.5
Nitab4.5_0002875g0050 Nicotiana tabacum HOM05D007939 ORTHO05D010027 1.8e-13 78.6 55 63.6
Nitab4.5_0000642g0220 Nicotiana tabacum HOM05D007939 ORTHO05D010027 2.3e-13 78.2 49 67.3
CAN.G853.35 Capsicum annuum HOM05D007939 ORTHO05D010027 3.1e-13 77.8 60 63.3
Migut.D01894 Erythranthe guttata HOM05D007939 ORTHO05D010027 3.1e-13 77.8 55 69.1
Peaxi162Scf00017g02235 Petunia axillaris HOM05D007939 ORTHO05D010027 3.1e-13 77.8 53 64.2
Sabra15G0093500 Salix brachista HOM05D007939 ORTHO05D010027 5.2e-13 77.0 45 73.3
Solyc06g071260.4 Solanum lycopersicum HOM05D007939 ORTHO05D010027 1.5e-12 75.5 57 68.4
EL10Ac5g10844 Beta vulgaris HOM05D007939 ORTHO05D010027 2.0e-12 75.1 49 73.5
PGSC0003DMG400033058 Solanum tuberosum HOM05D007939 ORTHO05D010027 3.4e-12 74.3 57 66.7
SGA_v2.0_scaffold7G04104 Striga asiatica HOM05D007939 ORTHO05D010027 4.4e-12 73.9 41 78.0
EL10Ac5g10864 Beta vulgaris HOM05D007939 ORTHO05D010027 9.8e-12 72.8 45 77.8
EL10Ac5g11334 Beta vulgaris HOM05D007939 ORTHO05D010027 9.8e-12 72.8 47 74.5
Medtr4g107140 Medicago truncatula HOM05D007939 ORTHO05D010027 9.8e-12 72.8 45 73.3
Oeu046758.2 Olea europaea HOM05D007939 ORTHO05D010027 1.3e-11 72.4 40 77.5
Os03g0824500 Oryza sativa ssp. japonica HOM05D007939 ORTHO05D010027 4.9e-11 70.5 46 71.7
Nitab4.5_0002101g0080 Nicotiana tabacum HOM05D007939 ORTHO05D010027 6.4e-11 70.1 44 77.3
CAN.G628.63 Capsicum annuum HOM05D007939 ORTHO05D010027 1.1e-10 69.3 45 75.6
Nitab4.5_0000003g0340 Nicotiana tabacum HOM05D007939 ORTHO05D010027 1.4e-10 68.9 46 71.7
ATR0712G037 Amborella trichopoda HOM05D007939 ORTHO05D010027 1.2e-09 65.9 40 75.0
unitig_21.g20455 Utricularia gibba HOM05D002627 ORTHO05D010027 1.6e-09 65.5 55 56.4
Zm00001eb302590 Zea mays HOM05D007939 ORTHO05D010027 3.0e-08 61.2 39 69.2
QL10p013938 Quercus lobata HOM05D007939 ORTHO05D010027 2.5e-07 58.2 44 59.1
Zm00001eb123900 Zea mays HOM05D007939 ORTHO05D010027 3.3e-07 57.8 40 65.0
Zm00001eb151290 Zea mays HOM05D007939 ORTHO05D010027 3.3e-07 57.8 40 65.0
Peaxi162Scf00689g00418 Petunia axillaris HOM05D007939 ORTHO05D010027 1.6e-06 55.5 57 50.9


User provided reference genes

Program Settings