Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 0.0e+00 2149.8 1088 100.0
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 0.0e+00 1630.9 1023 83.8
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 0.0e+00 1568.9 1036 79.9
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 0.0e+00 1563.1 1033 80.3
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 0.0e+00 1555.8 1029 80.5
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 0.0e+00 1525.8 1036 79.1
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 0.0e+00 1478.0 1028 77.3
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 0.0e+00 1474.9 1027 77.3
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 0.0e+00 1414.4 1028 75.3
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 0.0e+00 1404.4 1027 74.7
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 0.0e+00 1335.9 1026 71.8
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 0.0e+00 1332.4 1040 68.8
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 3.7e-311 1071.6 1023 60.8
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 1.2e-240 837.4 684 69.9
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 5.6e-233 812.0 1079 45.9
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 4.1e-228 795.8 1136 44.7
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 4.3e-225 785.8 1100 44.3
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 1.1e-223 781.2 1085 45.3
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 4.0e-223 779.2 1078 46.4
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 5.2e-223 778.9 1086 45.3
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 2.6e-222 776.5 1078 46.0
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 4.4e-222 775.8 1104 45.1
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 1.3e-221 774.2 1165 43.5
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 3.7e-221 772.7 1052 45.3
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.1e-220 771.2 1123 43.1
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 5.4e-220 768.8 1098 45.5
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 2.7e-219 766.5 1154 43.2
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 2.7e-219 766.5 1098 45.6
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 1.0e-218 764.6 1127 43.1
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 8.6e-218 761.5 1129 43.5
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 8.6e-218 761.5 1103 44.2
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 1.5e-217 760.8 1136 42.7
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 7.3e-217 758.4 1159 43.7
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 2.8e-216 756.5 1113 43.8
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 2.0e-214 750.4 1113 43.9
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 2.6e-214 750.0 1143 42.5
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 3.4e-214 749.6 1138 42.2
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 3.4e-214 749.6 1167 43.1
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 4.4e-214 749.2 1115 43.2
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 2.9e-213 746.5 1157 42.3
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 1.4e-212 744.2 1114 42.5
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 2.7e-211 740.0 1092 44.0
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 7.8e-211 738.4 1142 43.5
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 3.9e-210 736.1 1175 42.1
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 4.3e-209 732.6 1122 42.2
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 2.1e-208 730.3 1064 44.3
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.1e-207 726.5 1164 40.7
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 5.8e-206 722.2 1204 40.5
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 4.9e-205 719.2 1110 42.5
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 4.9e-205 719.2 1087 42.8
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.0e-202 711.4 951 44.2
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 1.1e-201 708.0 1027 43.3
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 1.5e-201 707.6 1077 43.7
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 3.3e-201 706.4 1116 42.0
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 4.3e-201 706.1 1136 41.6
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 7.3e-201 705.3 1046 43.5
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 2.8e-200 703.4 1027 44.1
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 2.4e-199 700.3 1039 42.5
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 3.1e-199 699.9 1046 42.8
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 9.0e-199 698.4 1061 42.2
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 1.5e-198 697.6 1049 42.9
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 2.0e-198 697.2 1085 41.4
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 4.5e-198 696.0 855 47.6
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 2.2e-197 693.7 1113 41.2
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 2.4e-196 690.3 1044 42.2
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 4.2e-196 689.5 1032 42.9
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 1.2e-195 688.0 1049 42.1
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 1.6e-195 687.6 1023 42.5
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 1.0e-194 684.9 1077 41.7
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 1.8e-194 684.1 1108 40.0
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 3.9e-194 682.9 591 59.9
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 1.1e-193 681.4 1112 40.9
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 5.6e-193 679.1 1034 40.8
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 6.2e-192 675.6 1092 42.2
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 1.1e-191 674.9 1089 42.9
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 2.4e-191 673.7 1123 40.6
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 5.3e-191 672.5 1080 41.2
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 5.3e-191 672.5 1164 39.3
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 9.0e-191 671.8 1057 42.3
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 3.8e-189 666.4 1026 41.1
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 1.2e-187 661.4 1114 40.3
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 3.5e-187 659.8 556 58.1
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 6.0e-187 659.1 963 42.9
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 6.7e-186 655.6 1120 39.2
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 1.5e-185 654.4 966 42.3
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 9.6e-185 651.7 961 41.8
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 2.1e-184 650.6 1105 41.5
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 5.3e-183 646.0 1159 38.9
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 2.9e-181 640.2 1040 40.5
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 1.1e-180 638.3 983 43.0
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.2e-179 634.8 962 42.3
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.4e-175 620.5 960 41.6
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 1.0e-173 615.1 1018 39.1
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.1e-167 595.1 931 43.6
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 3.2e-164 583.6 1114 36.7
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 7.4e-161 572.4 962 39.2
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 3.7e-160 570.1 1007 38.9
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 9.4e-156 555.4 997 37.8
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 2.7e-155 553.9 573 51.8
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 1.0e-149 535.4 706 45.6
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 8.8e-146 522.3 1125 36.4
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 4.4e-129 466.8 880 38.1
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 9.5e-124 449.1 414 55.6
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 4.0e-122 443.7 739 36.1
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 4.1e-119 433.7 359 61.3
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 5.0e-117 426.8 850 36.8
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.9e-116 424.9 890 36.2
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 2.1e-115 421.4 314 65.9
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.5e-113 415.2 547 42.4
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 3.5e-110 404.1 525 41.0
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 2.5e-108 397.9 532 43.6
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 6.4e-104 383.3 540 41.9
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 4.6e-102 377.1 435 46.4
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.4e-98 365.5 864 34.7
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 4.0e-98 364.0 695 38.8
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.0e-64 253.1 680 31.6
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 7.9e-62 243.4 229 56.8
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.1e-60 239.6 221 54.3
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 2.6e-28 132.1 272 32.0
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 6.3e-19 100.9 200 33.5
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 1.1e-15 90.1 331 31.7
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 1.9e-15 89.4 91 50.5
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 2.1e-14 85.9 57 64.9
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 3.6e-14 85.1 79 54.4
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 4.7e-14 84.7 102 47.1
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 6.1e-14 84.3 64 60.9
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.8e-13 82.8 158 38.6
C03p37040 Brassica napus HOM05D000922 ORTHO05D007418 2.3e-13 82.4 119 46.2
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 2.3e-13 82.4 55 67.3
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 3.0e-13 82.0 53 67.9
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 2.0e-12 79.3 90 53.3
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 5.7e-12 77.8 314 27.7
FAN04G1664 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.9e-08 65.1 128 39.1
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 2.1e-06 59.3 34 70.6


User provided reference genes

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