Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g13680 Schrenkiella parvula HOM05D002116 ORTHO05D011711 1.8e-75 285.8 139 100.0
Thhalv10010161m.g Eutrema salsugineum HOM05D002116 ORTHO05D002438 4.4e-18 95.1 135 48.1
BcaC07g39792 Brassica carinata HOM05D002116 ORTHO05D002438 2.2e-17 92.8 150 44.7
BolC8t50597H Brassica oleracea HOM05D002116 ORTHO05D002438 2.2e-17 92.8 150 44.7
C08p29860 Brassica napus HOM05D002116 ORTHO05D002438 4.9e-17 91.7 150 44.7
Sp5g07730 Schrenkiella parvula HOM05D002116 ORTHO05D002438 1.4e-16 90.1 131 46.6
AL5G35800 Arabidopsis lyrata HOM05D002116 ORTHO05D002438 5.4e-16 88.2 131 48.1
Carub.0005s2132 Capsella rubella HOM05D002116 ORTHO05D002438 7.1e-16 87.8 135 45.2
BraA09t40221Z Brassica rapa HOM05D002116 ORTHO05D002438 3.5e-15 85.5 150 42.7
A09p47650 Brassica napus HOM05D002116 ORTHO05D002438 4.6e-15 85.1 150 42.0
BcaB01g00165 Brassica carinata HOM05D002116 ORTHO05D002438 1.7e-14 83.2 131 45.0
BcaC02g09699 Brassica carinata HOM05D002116 ORTHO05D002438 1.7e-14 83.2 130 45.4
BolC4t25325H Brassica oleracea HOM05D002116 ORTHO05D002438 1.7e-14 83.2 130 45.4
AT3G54720 Arabidopsis thaliana HOM05D002116 ORTHO05D002438 2.3e-14 82.8 131 45.8
CARHR164650 Cardamine hirsuta HOM05D002116 ORTHO05D002438 2.3e-14 82.8 131 45.0
A04p05100 Brassica napus HOM05D002116 ORTHO05D002438 3.0e-14 82.4 134 44.0
C04p37600 Brassica napus HOM05D002116 ORTHO05D002438 3.9e-14 82.0 133 44.4
BraA04t16221Z Brassica rapa HOM05D002116 ORTHO05D002438 6.6e-14 81.3 134 44.0
Aa31sc392G10 Aethionema arabicum HOM05D002116 ORTHO05D002438 1.3e-12 77.0 103 43.7
BcaB02g08456 Brassica carinata HOM05D002116 ORTHO05D002438 2.1e-12 76.3 90 48.9
Sp7g09700 Schrenkiella parvula HOM05D010193 ORTHO05D011711 1.7e-09 66.6 44 68.2
THA.LOC104825265 Tarenaya hassleriana HOM05D002116 ORTHO05D002438 2.4e-08 62.8 131 38.2
Manes.08G038300 Manihot esculenta HOM05D002116 ORTHO05D002438 4.2e-08 62.0 92 39.1
Potri.016G064300 Populus trichocarpa HOM05D002116 ORTHO05D002438 9.3e-08 60.8 89 39.3
Ciclev10011190m.g Citrus clementina HOM05D002116 ORTHO05D002438 1.6e-07 60.1 148 32.4
Sabra06G0152500 Salix brachista HOM05D002116 ORTHO05D002438 2.1e-07 59.7 86 40.7
Atru.chr8.1252 Acer truncatum HOM05D002116 ORTHO05D002438 7.9e-07 57.8 92 34.8
Cpa.g.sc222.2 Carica papaya HOM05D002116 ORTHO05D002438 5.1e-06 55.1 86 37.2
Sp4g05650 Schrenkiella parvula HOM05D000305 ORTHO05D000065 6.6e-06 54.7 43 58.1


User provided reference genes

Program Settings