Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g13480 Schrenkiella parvula HOM05D011956 ORTHO05D014041 1.0e-153 546.6 259 100.0
A06p19180 Brassica napus HOM05D011956 ORTHO05D014041 2.0e-80 303.1 209 71.8
BraA06t25001Z Brassica rapa HOM05D011956 ORTHO05D014041 7.6e-80 301.2 209 71.3
BcaC07g39335 Brassica carinata HOM05D011956 ORTHO05D014041 5.6e-75 285.0 204 69.6
C08p23510 Brassica napus HOM05D011956 ORTHO05D014041 1.6e-66 256.9 169 72.2
CARHR157320 Cardamine hirsuta HOM05D011956 ORTHO05D014041 9.0e-65 251.1 208 61.5
AL5G28140 Arabidopsis lyrata HOM05D011956 ORTHO05D014041 6.5e-63 245.0 204 56.4
Carub.0005s1487 Capsella rubella HOM05D011956 ORTHO05D014041 5.7e-59 231.9 220 50.5
C02p30570 Brassica napus HOM05D011956 ORTHO05D014041 1.1e-54 217.6 203 52.2
BolC2t09107H Brassica oleracea HOM05D011956 ORTHO05D014041 1.1e-54 217.6 203 52.2
Thhalv10015397m.g Eutrema salsugineum HOM05D011956 ORTHO05D014041 2.5e-54 216.5 207 54.1
Carub.0003s1565 Capsella rubella HOM05D011956 ORTHO05D014041 2.7e-53 213.0 204 50.5
CARHR157510 Cardamine hirsuta HOM05D011956 ORTHO05D014041 3.9e-52 209.1 194 51.0
AT3G15910 Arabidopsis thaliana HOM05D011956 ORTHO05D014041 9.1e-49 198.0 210 47.6
COL.COLO4_34020 Corchorus olitorius HOM05D001729 ORTHO05D001155 3.2e-09 66.6 188 27.1
HanXRQChr15g0474381 Helianthus annuus HOM05D008898 ORTHO05D001155 1.6e-08 64.3 215 26.5
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 2.7e-08 63.5 193 23.3
Sabra09G0127200 Salix brachista HOM05D001729 ORTHO05D001155 3.5e-08 63.2 176 26.1
HanXRQChr15g0474331 Helianthus annuus HOM05D008898 ORTHO05D001155 1.0e-07 61.6 214 25.7
Duzib170G0599 Durio zibethinus HOM05D001729 ORTHO05D001155 2.3e-07 60.5 207 24.6
Gorai.006G112800 Gossypium raimondii HOM05D001729 ORTHO05D001155 2.9e-07 60.1 177 26.0
Lj2A946T25 Lonicera japonica HOM05D001729 ORTHO05D001155 3.9e-07 59.7 180 24.4
QL05p014501 Quercus lobata HOM05D001729 ORTHO05D001155 6.6e-07 58.9 195 27.2
Gohir.D09G096101 Gossypium hirsutum HOM05D001729 ORTHO05D001155 1.1e-06 58.2 177 26.0
PSO384G0370 Papaver somniferum HOM05D001729 ORTHO05D001155 5.6e-06 55.8 118 33.9
Gohir.A09G096401 Gossypium hirsutum HOM05D001729 ORTHO05D001155 9.5e-06 55.1 113 29.2


User provided reference genes

Program Settings