Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g12450 Schrenkiella parvula HOM05D005427 ORTHO05D006461 1.2e-118 429.9 225 100.0
A06p28350 Brassica napus HOM05D005427 ORTHO05D006461 4.9e-99 364.8 225 84.0
BraA06t25777Z Brassica rapa HOM05D005427 ORTHO05D006461 4.9e-99 364.8 225 84.0
BraA07t29893Z Brassica rapa HOM05D005427 ORTHO05D006461 1.1e-98 363.6 225 83.1
BcaC01g02424 Brassica carinata HOM05D005427 ORTHO05D006461 1.2e-97 360.1 225 83.6
C03p65440 Brassica napus HOM05D005427 ORTHO05D006461 1.2e-97 360.1 225 83.6
BolC3t18796H Brassica oleracea HOM05D005427 ORTHO05D006461 1.2e-97 360.1 225 83.6
BcaB01g00686 Brassica carinata HOM05D005427 ORTHO05D006461 1.7e-96 356.3 225 83.1
Thhalv10010700m.g Eutrema salsugineum HOM05D005427 ORTHO05D006461 4.3e-95 351.7 225 83.1
Thhalv10019696m.g Eutrema salsugineum HOM05D005427 ORTHO05D006461 2.1e-94 349.4 225 81.8
A07p22100 Brassica napus HOM05D005427 ORTHO05D006461 2.8e-94 349.0 245 75.5
AL7G47510 Arabidopsis lyrata HOM05D005427 ORTHO05D006461 2.2e-91 339.3 224 79.9
BcaC07g39428 Brassica carinata HOM05D005427 ORTHO05D006461 8.3e-91 337.4 225 81.3
AT3G49645 Arabidopsis thaliana HOM05D005427 ORTHO05D006461 3.9e-88 328.6 225 78.2
Carub.0005s1599 Capsella rubella HOM05D005427 ORTHO05D006461 1.5e-87 326.6 225 76.9
CARHR158680 Cardamine hirsuta HOM05D005427 ORTHO05D006461 1.1e-85 320.5 226 77.0
BraA06t24896Z Brassica rapa HOM05D007023 ORTHO05D008684 2.3e-85 319.3 210 81.4
BcaB02g09598 Brassica carinata HOM05D005427 ORTHO05D006461 8.9e-85 317.4 226 76.1
C08p24660 Brassica napus HOM05D007023 ORTHO05D008684 1.0e-80 303.9 209 79.9
BolC8t50081H Brassica oleracea HOM05D007023 ORTHO05D008684 1.0e-80 303.9 209 79.9
AL5G29490 Arabidopsis lyrata HOM05D007023 ORTHO05D008684 2.3e-77 292.7 209 75.1
Aa31LG4G18120 Aethionema arabicum HOM05D005427 ORTHO05D006461 1.9e-74 283.1 228 65.8
A06p18060 Brassica napus HOM05D007023 ORTHO05D008684 3.2e-74 282.3 211 73.5
THA.LOC104819282 Tarenaya hassleriana HOM05D005427 ORTHO05D006461 3.2e-74 282.3 221 67.0
THA.LOC104799739 Tarenaya hassleriana HOM05D005427 ORTHO05D006461 2.6e-60 236.1 231 56.3
Thecc.01G082100 Theobroma cacao HOM05D005427 ORTHO05D006461 2.5e-55 219.5 222 52.7
Atru.chr3.1127 Acer truncatum HOM05D005427 ORTHO05D006461 9.6e-55 217.6 222 52.3
Atru.chr3.1136 Acer truncatum HOM05D005427 ORTHO05D006461 9.6e-55 217.6 222 52.3
Ciclev10026408m.g Citrus clementina HOM05D005427 ORTHO05D006461 1.5e-52 210.3 222 50.5
Gorai.007G232600 Gossypium raimondii HOM05D005427 ORTHO05D006461 4.5e-52 208.8 222 50.9
Gohir.A11G206966 Gossypium hirsutum HOM05D005427 ORTHO05D006461 7.1e-50 201.4 222 49.5
COL.COLO4_11665 Corchorus olitorius HOM05D005427 ORTHO05D006461 1.2e-49 200.7 224 47.8
TWI74G0676 Tripterygium wilfordii HOM05D005427 ORTHO05D006461 1.2e-49 200.7 220 50.5
Potri.017G091300 Populus trichocarpa HOM05D005427 ORTHO05D006461 2.1e-49 199.9 224 48.7
TAR628G1492 Trochodendron aralioides HOM05D001631 ORTHO05D001591 3.0e-48 196.1 222 48.6
QL06p037683 Quercus lobata HOM05D005427 ORTHO05D006461 8.7e-48 194.5 222 49.1
ClCG09G016510 Citrullus lanatus HOM05D005427 ORTHO05D006461 1.9e-47 193.4 220 48.6
RcHm_v2.0_Chr2g0109701 Rosa chinensis HOM05D005427 ORTHO05D006461 3.3e-47 192.6 225 45.3
Cpa.g.sc3.369 Carica papaya HOM05D005427 ORTHO05D006461 9.6e-47 191.0 223 46.2
Nn1g05775 Nelumbo nucifera HOM05D005427 ORTHO05D006461 1.3e-46 190.7 221 48.0
Prupe.6G211100 Prunus persica HOM05D005427 ORTHO05D006461 4.8e-46 188.7 221 43.0
FvH4_1g18830 Fragaria vesca HOM05D005427 ORTHO05D006461 6.2e-46 188.3 221 45.2
Dinv36993 Davidia involucrata HOM05D005427 ORTHO05D006461 4.0e-45 185.7 221 47.5
Gohir.D11G216500 Gossypium hirsutum HOM05D005427 ORTHO05D006461 4.0e-45 185.7 206 50.0
CSS0024088 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 5.3e-45 185.3 222 45.0
CSS0032221 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 9.0e-45 184.5 222 45.0
CsaV3_7G007450 Cucumis sativus L. HOM05D005427 ORTHO05D006461 1.5e-44 183.7 218 45.9
MD15G1405500 Malus domestica HOM05D005427 ORTHO05D006461 1.5e-44 183.7 221 43.9
CiPaw.08G147100 Carya illinoinensis HOM05D005427 ORTHO05D006461 3.4e-44 182.6 218 46.3
Manes.13G105100 Manihot esculenta HOM05D005427 ORTHO05D006461 4.5e-44 182.2 227 43.6
RcHm_v2.0_Chr5g0054161 Rosa chinensis HOM05D005427 ORTHO05D006461 1.3e-43 180.6 225 44.0
FAN23G0196 Fragaria x ananassa HOM05D005427 ORTHO05D006461 2.9e-43 179.5 231 42.9
GSVIVG01017423001 Vitis vinifera HOM05D005427 ORTHO05D006461 4.9e-43 178.7 223 43.0
CSS0026502 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 1.1e-42 177.6 222 44.1
MELO3C018556.2 Cucumis melo HOM05D005427 ORTHO05D006461 1.1e-42 177.6 218 45.4
PGR102G2470 Punica granatum HOM05D005427 ORTHO05D006461 1.4e-42 177.2 225 41.8
PGSC0003DMG400012980 Solanum tuberosum HOM05D005427 ORTHO05D006461 7.1e-42 174.9 219 44.3
Rhsim07G0122400 Rhododendron simsii HOM05D005427 ORTHO05D006461 1.6e-41 173.7 231 41.6
CAN.G1830.8 Capsicum annuum HOM05D005427 ORTHO05D006461 6.0e-41 171.8 222 44.1
Sed0018601 Sechium edule HOM05D005427 ORTHO05D006461 1.0e-40 171.0 216 42.1
Phvul.003G285200 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 3.9e-40 169.1 225 42.7
Lj3g0020172 Lotus japonicus HOM05D005427 ORTHO05D006461 5.1e-40 168.7 236 40.7
Sopen09g003480 Solanum pennellii HOM05D005427 ORTHO05D006461 5.1e-40 168.7 219 43.8
Phvul.003G285800 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 1.1e-39 167.5 231 40.7
Carub.0005s0959 Capsella rubella HOM05D005427 ORTHO05D006461 1.5e-39 167.2 130 70.8
Lalb_Chr04g0263231 Lupinus albus HOM05D005427 ORTHO05D006461 1.5e-39 167.2 223 42.6
Aqoxy3G03178 Aquilegia oxysepala HOM05D005427 ORTHO05D006461 1.9e-39 166.8 219 41.6
Solyc09g008680.4 Solanum lycopersicum HOM05D005427 ORTHO05D006461 1.9e-39 166.8 219 42.9
EL10Ac9g20957 Beta vulgaris HOM05D005427 ORTHO05D006461 2.5e-39 166.4 215 43.7
TAR376G0349 Trochodendron aralioides HOM05D005427 ORTHO05D006461 3.3e-39 166.0 220 42.3
FAN19G1732 Fragaria x ananassa HOM05D005427 ORTHO05D006461 4.3e-39 165.6 250 39.2
Dinv21205 Davidia involucrata HOM05D005427 ORTHO05D006461 5.7e-39 165.2 222 44.1
Cfa001616 Carpinus fangiana HOM05D005427 ORTHO05D006461 7.4e-39 164.9 225 44.4
Eucgr.H02348 Eucalyptus grandis HOM05D005427 ORTHO05D006461 3.7e-38 162.5 218 40.8
AUR62041740 Chenopodium quinoa HOM05D005427 ORTHO05D006461 4.8e-38 162.2 216 41.2
ECA233G5189 Erigeron canadensis HOM05D005427 ORTHO05D006461 6.3e-38 161.8 221 42.1
PSO761G0697 Papaver somniferum HOM05D005427 ORTHO05D006461 6.3e-38 161.8 227 38.8
CANSAT01G2304 Cannabis sativa HOM05D005427 ORTHO05D006461 1.8e-37 160.2 223 40.4
Migut.F01758 Erythranthe guttata HOM05D005427 ORTHO05D006461 1.8e-37 160.2 220 40.0
vmacro07282 Vaccinium macrocarpon HOM05D005427 ORTHO05D006461 2.4e-37 159.8 223 39.0
Hund15020 Selenicereus undatus HOM05D005427 ORTHO05D006461 3.1e-37 159.5 216 40.3
HanXRQChr12g0368771 Helianthus annuus HOM05D005427 ORTHO05D006461 9.0e-37 157.9 205 42.9
AUR62024067 Chenopodium quinoa HOM05D005427 ORTHO05D006461 1.2e-36 157.5 218 41.7
Glyma.08G273000 Glycine max HOM05D005427 ORTHO05D006461 1.2e-36 157.5 230 38.3
Duzib264G0001 Durio zibethinus HOM05D005427 ORTHO05D006461 2.6e-36 156.4 180 47.8
CDE02G2678 Ceratophyllum demersum HOM05D005427 ORTHO05D006160 4.5e-36 155.6 226 39.8
DCAR_006436 Daucus carota HOM05D005427 ORTHO05D006461 4.5e-36 155.6 204 42.2
Ah.01g015840 Amaranthus hybridus HOM05D005427 ORTHO05D006461 5.9e-36 155.2 217 41.0
TPR.G15264 Trifolium pratense HOM05D005427 ORTHO05D006461 7.6e-36 154.8 235 39.6
Ah.01g003640 Amaranthus hybridus HOM05D000109 ORTHO05D000520 1.7e-35 153.7 222 41.0
Hund13132 Selenicereus undatus HOM05D005427 ORTHO05D006461 1.7e-35 153.7 213 39.9
Hund00873 Selenicereus undatus HOM05D005427 ORTHO05D006461 2.2e-35 153.3 205 41.0
AUR62012052 Chenopodium quinoa HOM05D005427 ORTHO05D006461 3.8e-35 152.5 217 41.5
PSO210G5957 Papaver somniferum HOM05D005427 ORTHO05D006461 3.8e-35 152.5 221 36.7
SGA_v2.0_scaffold70G23436 Striga asiatica HOM05D005427 ORTHO05D006461 6.5e-35 151.8 219 40.2
Nitab4.5_0004281g0090 Nicotiana tabacum HOM05D005427 ORTHO05D006461 1.1e-34 151.0 217 39.6
Sc06g0009050 Simmondsia chinensis HOM05D005427 ORTHO05D006461 1.0e-32 144.4 215 39.1
SGA_v2.0_scaffold4G02171 Striga asiatica HOM05D005427 ORTHO05D006461 1.3e-32 144.1 219 39.3
SGA_v2.0_scaffold147G36350 Striga asiatica HOM05D005427 ORTHO05D006461 3.0e-32 142.9 219 38.8
Peaxi162Scf01051g00142 Petunia axillaris HOM05D005427 ORTHO05D006461 3.9e-32 142.5 222 39.6
vmacro05473 Vaccinium macrocarpon HOM05D005427 ORTHO05D006461 5.1e-32 142.1 249 35.7
AUR62019836 Chenopodium quinoa HOM05D005427 ORTHO05D006461 8.7e-32 141.4 215 38.1
Peaxi162Scf00500g00116 Petunia axillaris HOM05D005427 ORTHO05D006461 1.3e-30 137.5 203 38.4
Phvul.002G065300 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 4.8e-30 135.6 182 42.9
Glyma.20G162400 Glycine max HOM05D005427 ORTHO05D006461 1.1e-29 134.4 224 36.6
Psat4g120800 Pisum sativum HOM05D005427 ORTHO05D006461 1.4e-29 134.0 243 34.2
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 6.9e-29 131.7 243 37.0
MD01G1046300 Malus domestica HOM05D005427 ORTHO05D006461 1.2e-28 131.0 182 41.2
Os10g0360900 Oryza sativa ssp. japonica HOM05D005427 ORTHO05D006461 1.5e-28 130.6 222 32.4
HPP92_026626 Vanilla planifolia HOM05D005427 ORTHO05D006461 5.0e-27 125.6 221 35.7
HPP92_024834 Vanilla planifolia HOM05D005427 ORTHO05D006461 1.9e-26 123.6 221 35.3
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 1.2e-25 120.9 274 32.8
Lsat_1_v5_gn_8_18901 Lactuca sativa HOM05D005427 ORTHO05D006461 1.2e-25 120.9 227 34.8
Hma1.2p1_0561F.1_g178960 Hydrangea macrophylla HOM05D005427 ORTHO05D006461 1.4e-24 117.5 138 45.7
Sabra17G0080400 Salix brachista HOM05D005427 ORTHO05D006461 3.0e-24 116.3 200 37.5
Zm00001eb064010 Zea mays HOM05D005427 ORTHO05D006461 3.9e-24 115.9 248 32.3
FAN27G1155 Fragaria x ananassa HOM05D005427 ORTHO05D006461 5.1e-24 115.5 219 34.7
FAN26G2664 Fragaria x ananassa HOM05D005427 ORTHO05D006461 1.1e-23 114.4 224 36.2
EL10Ac6g13479 Beta vulgaris HOM05D005427 ORTHO05D006461 2.5e-23 113.2 168 40.5
Haze_16903 Corylus avellana HOM05D005427 ORTHO05D006461 3.3e-23 112.8 224 37.5
Zm00001eb210960 Zea mays HOM05D005427 ORTHO05D006461 7.4e-23 111.7 218 33.9
Cc09_g03000 Coffea canephora HOM05D005427 ORTHO05D006461 2.2e-22 110.2 137 44.5
TWI77G0140 Tripterygium wilfordii HOM05D005427 ORTHO05D006461 2.2e-22 110.2 112 50.9
Medtr8g067265 Medicago truncatula HOM05D005427 ORTHO05D006461 2.8e-22 109.8 220 34.5
Os07g0264900 Oryza sativa ssp. japonica HOM05D005427 ORTHO05D006461 2.4e-21 106.7 186 32.3
AagrBONN_evm.TU.Sc2ySwM_228.2937 Anthoceros agrestis HOM05D005427 ORTHO05D006461 5.3e-21 105.5 210 31.0
Cc09_g02990 Coffea canephora HOM05D005427 ORTHO05D006461 4.2e-18 95.9 78 59.0
Pp3c24_9930 Physcomitrium patens HOM05D005427 ORTHO05D006461 5.5e-18 95.5 223 28.7
Ah.16g109230 Amaranthus hybridus HOM05D005427 ORTHO05D006461 1.2e-17 94.4 111 44.1
VMungo1309G2225 Vigna mungo HOM05D005427 ORTHO05D006461 6.1e-17 92.0 135 40.7
SMO367G1008 Selaginella moellendorffii HOM05D005427 ORTHO05D006461 2.3e-16 90.1 176 33.5
Rhsim10G0082400 Rhododendron simsii HOM05D005427 ORTHO05D006461 3.3e-15 86.3 65 55.4
CSS0003252 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 6.3e-14 82.0 80 50.0
Nitab4.5_0006709g0040 Nicotiana tabacum HOM05D005427 ORTHO05D006461 1.8e-13 80.5 80 46.2
MD00G1139600 Malus domestica HOM05D005427 ORTHO05D006461 2.6e-12 76.6 56 62.5
MD04G1240700 Malus domestica HOM05D005427 ORTHO05D006461 2.6e-12 76.6 56 62.5
MBI16_g26727_MAGBIO Magnolia biondii HOM05D005427 ORTHO05D006461 2.9e-11 73.2 88 44.3
AagrBONN_evm.TU.Sc2ySwM_344.3300 Anthoceros agrestis HOM05D005427 ORTHO05D006461 1.5e-10 70.9 129 34.9
SEGI_00262 Sequoiadendron giganteum HOM05D005427 ORTHO05D006461 3.2e-10 69.7 70 45.7
Mapoly0002s0147 Marchantia polymorpha HOM05D005427 ORTHO05D006461 1.4e-08 64.3 235 24.3
Mapoly0028s0128 Marchantia polymorpha HOM05D005427 ORTHO05D006461 1.4e-08 64.3 215 25.1
MSTRG.375 Avicennia marina HOM05D005427 ORTHO05D006461 1.8e-08 63.9 77 44.2
Mapoly0085s0034 Marchantia polymorpha HOM05D005427 ORTHO05D006461 3.0e-08 63.2 216 24.5
Actinidia11934 Actinidia chinensis HOM05D005427 ORTHO05D006461 4.0e-08 62.8 116 35.3
MBI16_g14676_MAGBIO Magnolia biondii HOM05D005427 ORTHO05D006461 5.7e-07 58.9 131 32.1
SalBow7G4264 Salvia bowleyana HOM05D005427 ORTHO05D006461 8.2e-06 55.1 100 34.0


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