Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g11780 Schrenkiella parvula HOM05D007494 ORTHO05D009621 7.5e-203 710.3 357 100.0
A09p43410 Brassica napus HOM05D007494 ORTHO05D009621 5.3e-100 368.6 286 65.4
BraA09t39810Z Brassica rapa HOM05D007494 ORTHO05D009621 9.1e-100 367.9 286 65.0
BraA09t39811Z Brassica rapa HOM05D007494 ORTHO05D009621 1.3e-98 364.0 286 64.3
C08p25460 Brassica napus HOM05D007494 ORTHO05D009621 3.8e-98 362.5 290 64.8
BcaC07g39504 Brassica carinata HOM05D007494 ORTHO05D009621 2.7e-96 356.3 286 63.3
C08p25490 Brassica napus HOM05D007494 ORTHO05D009621 2.7e-96 356.3 286 63.3
Thhalv10011090m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 9.8e-94 347.8 298 62.4
BcaB01g00617 Brassica carinata HOM05D007494 ORTHO05D009621 5.9e-91 338.6 396 52.0
AL1G67140 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.3e-87 326.6 291 58.4
C08p25440 Brassica napus HOM05D007494 ORTHO05D009621 1.3e-82 310.8 293 57.7
BcaC07g39499 Brassica carinata HOM05D007494 ORTHO05D009621 6.1e-80 302.0 285 57.5
AL5G30530 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 8.0e-80 301.6 292 58.6
AL1G33790 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.6e-75 287.3 300 55.7
AT1G57580 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 8.0e-72 275.0 335 49.9
Sp1g18490 Schrenkiella parvula HOM05D007494 ORTHO05D009621 1.0e-71 274.6 285 56.1
Carub.0001s2024 Capsella rubella HOM05D007494 ORTHO05D009621 1.4e-71 274.2 297 52.9
BolC8t50168H Brassica oleracea HOM05D007494 ORTHO05D009621 1.5e-70 270.8 286 54.2
C08p20370 Brassica napus HOM05D007494 ORTHO05D009621 4.1e-68 262.7 284 49.3
BolC8t49665H Brassica oleracea HOM05D007494 ORTHO05D009621 4.1e-68 262.7 284 49.3
BcaC07g39053 Brassica carinata HOM05D007494 ORTHO05D009621 1.2e-67 261.2 284 49.3
Thhalv10009430m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 6.0e-67 258.8 286 52.4
A08p29250 Brassica napus HOM05D007494 ORTHO05D009621 1.3e-66 257.7 284 48.6
BraA08t34860Z Brassica rapa HOM05D007494 ORTHO05D009621 2.3e-66 256.9 284 48.2
BolC8t50169H Brassica oleracea HOM05D007494 ORTHO05D009621 6.6e-66 255.4 250 55.6
AT1G20795 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.1e-65 254.6 299 52.5
BcaB03g12853 Brassica carinata HOM05D007494 ORTHO05D009621 1.1e-65 254.6 284 47.2
BcaB03g13899 Brassica carinata HOM05D007494 ORTHO05D009621 1.5e-65 254.2 288 47.6
Thhalv10015953m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 5.6e-65 252.3 307 50.8
BolC8t50166H Brassica oleracea HOM05D007494 ORTHO05D009621 1.4e-63 247.7 293 50.5
BcaB07g30752 Brassica carinata HOM05D007494 ORTHO05D009621 1.8e-63 247.3 284 46.5
BcaB02g08200 Brassica carinata HOM05D007494 ORTHO05D009621 5.2e-63 245.7 284 46.8
AT1G20790 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 6.4e-61 238.8 290 49.0
Thhalv10012024m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.5e-57 226.9 284 46.5
AT1G20735 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 9.5e-57 224.9 305 46.6
AL1G33230 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 7.6e-54 215.3 303 44.6
AT1G20360 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.2e-53 213.8 293 48.5
THA.LOC104813281 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 8.4e-53 211.8 311 39.5
Aa31LG7G4950 Aethionema arabicum HOM05D007494 ORTHO05D009621 1.3e-50 204.5 322 41.3
BolC8t49745H Brassica oleracea HOM05D007494 ORTHO05D009621 2.3e-50 203.8 296 45.6
BcaC07g39120 Brassica carinata HOM05D007494 ORTHO05D009621 8.6e-50 201.8 302 45.4
C08p21040 Brassica napus HOM05D007494 ORTHO05D009621 1.1e-49 201.4 298 44.6
BolC8t49740H Brassica oleracea HOM05D007494 ORTHO05D009621 9.6e-49 198.4 299 43.8
BcaC07g39502 Brassica carinata HOM05D007494 ORTHO05D009621 2.1e-48 197.2 196 53.1
C08p25470 Brassica napus HOM05D007494 ORTHO05D009621 2.1e-48 197.2 196 53.1
THA.LOC104813247 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 1.1e-47 194.9 298 42.6
Aa31LG8G15360 Aethionema arabicum HOM05D007494 ORTHO05D009621 6.9e-47 192.2 309 39.8
AL1G45220 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.0e-46 190.7 300 43.3
AT1G20940 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.0e-46 190.7 305 42.0
BcaB03g11879 Brassica carinata HOM05D007494 ORTHO05D009621 8.4e-45 185.3 302 43.0
A03p18740 Brassica napus HOM05D007494 ORTHO05D009621 8.4e-45 185.3 287 43.9
BcaB03g12780 Brassica carinata HOM05D007494 ORTHO05D009621 5.4e-44 182.6 305 41.6
BraA03t11134Z Brassica rapa HOM05D007494 ORTHO05D009621 1.6e-43 181.0 287 43.2
BraA08t34811Z Brassica rapa HOM05D007494 ORTHO05D009621 3.5e-43 179.9 288 42.7
A08p28830 Brassica napus HOM05D007494 ORTHO05D009621 6.0e-43 179.1 288 42.7
Aa31LG7G4960 Aethionema arabicum HOM05D007494 ORTHO05D009621 2.3e-42 177.2 298 38.6
AT1G20800 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 3.0e-42 176.8 294 39.8
Carub.0001s2057 Capsella rubella HOM05D007494 ORTHO05D009621 3.0e-42 176.8 290 42.1
C08p21030 Brassica napus HOM05D007494 ORTHO05D009621 5.1e-42 176.0 258 45.3
A09p43460 Brassica napus HOM05D007494 ORTHO05D009621 4.3e-41 172.9 205 49.8
Carub.0001s1977 Capsella rubella HOM05D007494 ORTHO05D009621 4.3e-41 172.9 275 43.3
AL1G33970 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.8e-40 170.2 295 40.7
Carub.0005s1178 Capsella rubella HOM05D007494 ORTHO05D009621 1.8e-39 167.5 282 43.6
A09p43390 Brassica napus HOM05D007494 ORTHO05D009621 1.2e-38 164.9 125 62.4
Thhalv10012123m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.1e-35 154.1 244 42.6
Carub.0001s2025 Capsella rubella HOM05D007494 ORTHO05D009621 6.0e-35 152.5 300 36.7
Aa31LG8G15370 Aethionema arabicum HOM05D007494 ORTHO05D009621 7.9e-35 152.1 298 37.6
Carub.0004s0895 Capsella rubella HOM05D007494 ORTHO05D009621 1.1e-33 148.3 275 41.8
AT1G20240 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.8e-32 143.7 204 47.1
AT1G57565 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 6.2e-32 142.5 95 69.5
THA.LOC104813248 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 4.0e-31 139.8 288 34.7
BcaC07g39500 Brassica carinata HOM05D007494 ORTHO05D009621 9.0e-31 138.7 90 72.2
BcaC07g39114 Brassica carinata HOM05D007494 ORTHO05D009621 5.8e-30 136.0 284 38.0
BraA09t39808Z Brassica rapa HOM05D007494 ORTHO05D009621 8.4e-29 132.1 112 61.6
Thhalv10012236m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.1e-28 131.7 266 35.7
BcaB01g00618 Brassica carinata HOM05D007494 ORTHO05D009621 2.1e-27 127.5 114 57.9
A09p43420 Brassica napus HOM05D007494 ORTHO05D009621 2.1e-27 127.5 142 51.4
Thhalv10012172m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.3e-26 124.8 283 34.3
CARHR020740 Cardamine hirsuta HOM05D007494 ORTHO05D009621 3.9e-26 123.2 200 43.0
AT1G20690 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 6.2e-24 115.9 120 55.8
Thhalv10011940m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 8.2e-24 115.5 266 34.2
AL1G33090 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 5.3e-23 112.8 153 49.0
QL02p015450 Quercus lobata HOM05D007494 ORTHO05D009621 1.9e-20 104.4 301 28.2
Thhalv10012136m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 7.9e-19 99.0 206 35.4
BraA09t39809Z Brassica rapa HOM05D007494 ORTHO05D009621 1.3e-18 98.2 94 53.2
Aa31LG8G15340 Aethionema arabicum HOM05D007494 ORTHO05D009621 7.4e-17 92.4 166 38.6
AL1G32830 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 3.7e-16 90.1 77 61.0
C08p21080 Brassica napus HOM05D007494 ORTHO05D009621 4.1e-15 86.7 118 44.9
Sp1g18390 Schrenkiella parvula HOM05D007494 ORTHO05D009621 4.5e-14 83.2 86 55.8
Duzib041G0294 Durio zibethinus HOM05D007494 ORTHO05D009621 1.3e-13 81.6 285 27.0
AL8G44280 Arabidopsis lyrata HOM05D000015 ORTHO05D000734 3.6e-11 73.6 83 49.4
Thecc.08G063600 Theobroma cacao HOM05D007494 ORTHO05D009621 7.9e-11 72.4 112 37.5
Aqoxy5G01482 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 1.0e-10 72.0 278 23.7
Potri.005G254500 Populus trichocarpa HOM05D000664 ORTHO05D010866 1.0e-10 72.0 312 25.3
Potri.005G254633 Populus trichocarpa HOM05D000664 ORTHO05D010866 3.0e-10 70.5 314 25.5
CAN.G1631.3 Capsicum annuum HOM05D008697 ORTHO05D010866 5.7e-09 66.2 231 24.2
Nitab4.5_0000430g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 7.4e-09 65.9 221 27.1
Nitab4.5_0003309g0040 Nicotiana tabacum HOM05D008697 ORTHO05D010866 1.3e-08 65.1 219 26.9
Oeu004534.1 Olea europaea HOM05D008697 ORTHO05D010866 1.3e-08 65.1 311 25.7
Cc04_g08540 Coffea canephora HOM05D002420 ORTHO05D002422 2.2e-08 64.3 289 23.5
CAN.G1631.9 Capsicum annuum HOM05D008697 ORTHO05D010866 2.8e-08 63.9 251 23.9
AT1G20290 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 3.7e-08 63.5 71 53.5
BraA08t34812Z Brassica rapa HOM05D007494 ORTHO05D009621 6.3e-08 62.8 59 55.9
Peaxi162Scf00001g00056 Petunia axillaris HOM05D008697 ORTHO05D010866 8.2e-08 62.4 162 25.3
PGSC0003DMG400015282 Solanum tuberosum HOM05D008697 ORTHO05D010866 2.4e-07 60.8 232 24.6
COL.COLO4_25855 Corchorus olitorius HOM05D000007 ORTHO05D000521 4.1e-07 60.1 251 24.3
Sopen03g029650 Solanum pennellii HOM05D008697 ORTHO05D010866 1.2e-06 58.5 204 26.0
Nitab4.5_0005200g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 1.5e-06 58.2 219 25.6
Sopen03g029100 Solanum pennellii HOM05D008697 ORTHO05D010866 2.6e-06 57.4 231 24.2
PGSC0003DMG400025634 Solanum tuberosum HOM05D008697 ORTHO05D010866 2.6e-06 57.4 224 25.0
CAN.G1631.2 Capsicum annuum HOM05D008697 ORTHO05D010866 3.4e-06 57.0 231 22.9
PSO675G1828 Papaver somniferum HOM05D000664 ORTHO05D000491 5.9e-06 56.2 245 24.5


User provided reference genes

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