Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 1.8e-75 286.2 187 100.0
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 9.8e-53 210.7 159 91.2
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 4.8e-52 208.4 159 89.9
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 4.8e-52 208.4 159 89.9
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 2.7e-50 202.6 159 89.3
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 1.0e-49 200.7 159 89.9
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 1.7e-49 199.9 160 88.1
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 3.2e-48 195.7 159 88.1
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 8.8e-46 187.6 159 86.2
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 4.1e-43 178.7 157 72.0
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 1.0e-41 174.1 163 81.6
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 2.3e-41 172.9 159 81.8
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 2.8e-39 166.0 95 87.4
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 1.8e-38 163.3 159 77.4
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 1.0e-33 147.5 164 73.2
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 1.3e-33 147.1 164 72.6
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 3.0e-33 146.0 164 73.2
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 3.0e-33 146.0 166 69.9
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 5.0e-33 145.2 167 71.9
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 8.6e-33 144.4 165 71.5
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 1.1e-32 144.1 164 72.6
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 2.5e-32 142.9 164 72.6
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 3.3e-32 142.5 167 71.9
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 3.3e-32 142.5 167 71.9
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 7.3e-32 141.4 168 71.4
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 7.3e-32 141.4 164 70.1
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 9.5e-32 141.0 168 69.6
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 9.5e-32 141.0 175 68.6
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 1.2e-31 140.6 163 69.9
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 1.2e-31 140.6 161 68.9
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 3.6e-31 139.0 167 69.5
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 3.6e-31 139.0 171 71.3
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 3.6e-31 139.0 168 70.2
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 3.6e-31 139.0 162 69.8
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 4.7e-31 138.7 163 70.6
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 4.7e-31 138.7 168 69.0
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 1.0e-30 137.5 164 70.1
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 1.8e-30 136.7 165 70.3
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 4.0e-30 135.6 168 66.1
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 4.0e-30 135.6 166 70.5
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 4.0e-30 135.6 169 65.7
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 4.0e-30 135.6 167 70.1
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 6.8e-30 134.8 132 81.8
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 8.9e-30 134.4 162 68.5
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 8.9e-30 134.4 167 69.5
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 8.9e-30 134.4 166 69.9
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 8.9e-30 134.4 166 69.9
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 8.9e-30 134.4 165 70.9
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 2.6e-29 132.9 167 68.9
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 2.6e-29 132.9 132 78.0
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 3.4e-29 132.5 171 67.3
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 3.4e-29 132.5 135 77.0
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 4.4e-29 132.1 155 69.7
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 9.8e-29 131.0 164 68.3
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 1.3e-28 130.6 135 76.3
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 1.3e-28 130.6 168 69.0
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 1.7e-28 130.2 168 66.1
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 1.7e-28 130.2 167 67.7
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 2.2e-28 129.8 135 76.3
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 2.9e-28 129.4 141 75.2
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 3.7e-28 129.0 164 67.7
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 6.4e-28 128.3 115 85.2
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 6.4e-28 128.3 115 85.2
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 8.3e-28 127.9 125 79.2
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 1.1e-27 127.5 170 65.9
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 1.1e-27 127.5 167 64.7
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 1.9e-27 126.7 167 67.7
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 1.9e-27 126.7 164 67.1
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 1.9e-27 126.7 164 67.7
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 5.4e-27 125.2 170 65.9
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 5.4e-27 125.2 170 65.9
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 7.0e-27 124.8 165 65.5
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 2.7e-26 122.9 134 77.6
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 2.7e-26 122.9 130 77.7
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 7.8e-26 121.3 130 78.5
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 1.0e-25 120.9 165 64.8
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 6.6e-25 118.2 126 61.9
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 1.1e-24 117.5 159 64.8
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 1.9e-24 116.7 125 75.2
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 3.3e-24 115.9 128 73.4
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 7.3e-24 114.8 116 83.6
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 1.2e-23 114.0 111 79.3
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 4.7e-23 112.1 100 61.0
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 1.1e-22 110.9 132 72.0
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 2.3e-22 109.8 125 60.8
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 5.2e-22 108.6 104 89.4
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 8.9e-22 107.8 155 65.2
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 1.2e-21 107.5 167 60.5
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 2.6e-21 106.3 111 59.5
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.6e-21 106.3 113 75.2
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 5.8e-21 105.1 117 79.5
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 1.7e-20 103.6 124 46.0
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 1.3e-17 94.0 156 61.5
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 1.5e-16 90.5 146 62.3
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 6.2e-15 85.1 120 69.2
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 1.5e-13 80.5 89 71.9
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 2.0e-13 80.1 115 45.2
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 3.7e-12 75.9 100 41.0
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 1.9e-11 73.6 114 64.9
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 7.8e-10 68.2 72 52.8
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 2.3e-09 66.6 53 60.4
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 2.3e-09 66.6 166 53.6
Atru.chr4.788 Acer truncatum HOM05D007518 ORTHO05D008168 1.8e-06 57.0 34 82.4


User provided reference genes

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