Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 4.0e-96 354.8 179 100.0
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 2.7e-84 315.5 183 89.6
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 2.1e-81 305.8 183 86.3
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 1.8e-80 302.8 182 86.3
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 1.8e-80 302.8 189 84.7
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 4.0e-80 301.6 181 87.3
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 4.4e-79 298.1 174 87.9
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 4.4e-79 298.1 174 87.9
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 5.8e-79 297.7 181 84.5
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 2.2e-78 295.8 174 87.9
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 2.2e-78 295.8 174 87.9
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 6.4e-78 294.3 186 82.3
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 8.7e-75 283.9 187 79.7
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 8.7e-75 283.9 187 79.7
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 1.6e-73 279.6 187 79.1
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 2.1e-65 252.7 138 92.8
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 1.1e-53 213.8 178 64.0
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 4.8e-49 198.4 143 69.2
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 2.4e-48 196.1 153 65.4
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 3.1e-48 195.7 130 74.6
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 5.3e-48 194.9 130 72.3
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 6.9e-48 194.5 138 69.6
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 9.0e-48 194.1 131 71.0
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 9.0e-48 194.1 127 74.0
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 2.0e-47 193.0 127 73.2
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 4.5e-47 191.8 132 72.7
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 5.9e-47 191.4 127 72.4
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 5.9e-47 191.4 179 58.7
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 1.3e-46 190.3 145 63.4
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 1.3e-46 190.3 184 59.2
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 2.2e-46 189.5 138 71.0
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 2.9e-46 189.1 119 76.5
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 2.9e-46 189.1 135 71.1
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 5.0e-46 188.3 128 70.3
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 5.0e-46 188.3 162 62.3
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 6.5e-46 188.0 119 74.8
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 6.5e-46 188.0 130 70.8
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 8.5e-46 187.6 143 67.8
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 1.4e-45 186.8 151 63.6
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 1.4e-45 186.8 181 56.4
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 1.4e-45 186.8 130 70.8
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 1.9e-45 186.4 150 62.7
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 1.9e-45 186.4 135 70.4
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 1.9e-45 186.4 131 69.5
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 1.9e-45 186.4 139 64.7
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 2.5e-45 186.0 131 71.8
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 2.5e-45 186.0 130 70.0
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 3.2e-45 185.7 149 62.4
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 3.2e-45 185.7 146 63.7
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 4.2e-45 185.3 132 69.7
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 4.2e-45 185.3 131 68.7
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 4.2e-45 185.3 138 66.7
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 7.2e-45 184.5 146 65.1
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 7.2e-45 184.5 131 71.0
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 9.4e-45 184.1 129 72.9
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 1.2e-44 183.7 169 58.0
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 1.2e-44 183.7 136 66.9
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 3.6e-44 182.2 125 70.4
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 1.0e-43 180.6 173 57.8
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 2.3e-43 179.5 131 65.6
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 2.3e-43 179.5 135 67.4
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 3.0e-43 179.1 160 57.5
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 5.1e-43 178.3 129 69.0
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 6.7e-43 177.9 134 67.9
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 6.7e-43 177.9 109 74.3
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 1.1e-42 177.2 134 67.9
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 1.1e-42 177.2 130 66.9
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 1.1e-42 177.2 135 67.4
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 2.0e-42 176.4 157 61.8
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.0e-42 176.4 175 57.7
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.0e-42 176.4 150 64.0
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.0e-42 176.4 150 64.0
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 2.0e-42 176.4 135 67.4
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 3.3e-42 175.6 183 54.1
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.3e-42 175.6 176 55.7
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 7.4e-42 174.5 132 68.9
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 1.3e-41 173.7 131 68.7
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 4.8e-41 171.8 160 58.8
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 1.1e-40 170.6 132 62.9
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 1.4e-40 170.2 109 74.3
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 2.4e-40 169.5 179 57.5
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 2.4e-40 169.5 134 66.4
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 6.9e-40 167.9 127 66.9
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 6.9e-40 167.9 127 66.9
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 9.1e-40 167.5 134 66.4
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.2e-39 167.2 106 76.4
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 1.2e-39 167.2 119 70.6
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 1.5e-39 166.8 148 60.8
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 2.0e-39 166.4 163 57.1
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 2.0e-39 166.4 126 61.9
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 2.6e-39 166.0 163 57.1
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 4.5e-39 165.2 130 63.8
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 5.9e-39 164.9 128 64.1
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 5.9e-39 164.9 179 50.8
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 7.7e-39 164.5 122 63.9
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 7.7e-39 164.5 122 63.9
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 1.0e-38 164.1 136 62.5
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 2.2e-38 162.9 140 60.7
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 3.8e-38 162.2 136 61.8
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 4.7e-36 155.2 130 60.8
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 4.7e-36 155.2 166 54.8
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 7.9e-36 154.5 138 60.1
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 6.7e-35 151.4 142 59.9
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 1.5e-34 150.2 132 61.4
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 3.3e-34 149.1 129 60.5
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 5.7e-34 148.3 129 58.1
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 1.7e-33 146.7 106 68.9
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 1.8e-32 143.3 156 50.6
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 3.1e-32 142.5 154 53.2
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 5.3e-32 141.7 86 76.7
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 1.5e-31 140.2 107 63.6
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 2.0e-31 139.8 109 57.8
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 5.9e-31 138.3 123 60.2
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 2.9e-30 136.0 111 59.5
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 3.8e-30 135.6 187 41.2
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 8.5e-30 134.4 126 54.0
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 5.5e-29 131.7 107 65.4
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 2.3e-27 126.3 125 50.4
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 2.8e-25 119.4 123 46.3
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 9.1e-16 87.8 122 39.3
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 9.1e-16 87.8 98 45.9
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 4.7e-12 75.5 76 48.7
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.7e-07 59.7 63 47.6
PRCOL_00002065 Prasinoderma coloniale HOM05D006312 ORTHO05D007843 2.7e-07 59.7 81 40.7


User provided reference genes

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