Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g10600 Schrenkiella parvula HOM05D009173 ORTHO05D000309 6.8e-90 334.0 166 100.0
Sp5g18110 Schrenkiella parvula HOM05D009173 ORTHO05D000309 1.6e-75 286.2 166 84.9
Sp5g12640 Schrenkiella parvula HOM05D009173 ORTHO05D000309 1.4e-66 256.5 166 77.1
BraA09t38926Z Brassica rapa HOM05D009173 ORTHO05D000309 6.6e-53 211.1 153 62.7
BcaB03g15391 Brassica carinata HOM05D009173 ORTHO05D000309 4.3e-52 208.4 164 61.6
BcaC08g43001 Brassica carinata HOM05D009173 ORTHO05D000309 4.8e-43 178.3 163 57.1
Sp3g28210 Schrenkiella parvula HOM05D009173 ORTHO05D000309 3.4e-41 172.2 166 58.4
BcaC01g02366 Brassica carinata HOM05D009173 ORTHO05D000309 6.4e-40 167.9 167 53.3
BolC3t18879H Brassica oleracea HOM05D009173 ORTHO05D000309 6.4e-40 167.9 167 53.3
BcaC01g02494 Brassica carinata HOM05D009173 ORTHO05D000309 2.1e-38 162.9 160 50.0
BcaC07g38082 Brassica carinata HOM05D009173 ORTHO05D000309 6.0e-38 161.4 163 49.1
BcaC04g23317 Brassica carinata HOM05D009173 ORTHO05D000309 1.2e-33 147.1 145 53.1
BolC7t41302H Brassica oleracea HOM05D009173 ORTHO05D000309 8.4e-32 141.0 157 47.1
BcaC01g02038 Brassica carinata HOM05D009173 ORTHO05D000309 2.8e-27 125.9 157 43.3
BolC3t19182H Brassica oleracea HOM05D009173 ORTHO05D000309 2.8e-27 125.9 157 43.3
BcaC08g43767 Brassica carinata HOM05D009173 ORTHO05D000309 1.8e-26 123.2 159 43.4
BcaC06g34813 Brassica carinata HOM05D009173 ORTHO05D000309 1.0e-21 107.5 160 40.0
AL6G38890 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 2.8e-19 99.4 151 45.7
BcaB01g01569 Brassica carinata HOM05D009173 ORTHO05D000309 2.8e-19 99.4 89 51.7
AL3G40990 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 6.9e-18 94.7 165 39.4
AL5G24470 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 1.2e-17 94.0 161 36.6
Sp4g02170 Schrenkiella parvula HOM05D009173 ORTHO05D000309 2.0e-17 93.2 164 35.4
BolC6t36277H Brassica oleracea HOM05D009173 ORTHO05D027589 7.7e-17 91.3 145 37.9
AL1G56990 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 1.3e-16 90.5 148 37.2
C06p11380 Brassica napus HOM05D009173 ORTHO05D027589 2.2e-16 89.7 100 48.0
AL4G18060 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 2.9e-16 89.4 151 39.7
AL6G49470 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 2.9e-16 89.4 143 38.5
BcaC04g20956 Brassica carinata HOM05D008073 ORTHO05D000309 2.5e-15 86.3 90 45.6
BolC9t56587H Brassica oleracea HOM05D008073 ORTHO05D000309 2.5e-15 86.3 90 45.6
C09p37560 Brassica napus HOM05D008073 ORTHO05D000309 5.5e-15 85.1 75 49.3
C06p04030 Brassica napus HOM05D012943 ORTHO05D039056 1.2e-14 84.0 82 48.8
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-14 83.6 104 41.3
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 2.7e-14 82.8 104 41.3
AL2G19320 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 7.9e-14 81.3 74 52.7
BcaC06g36745 Brassica carinata HOM05D008073 ORTHO05D031794 7.9e-14 81.3 166 31.9
BcaB07g33163 Brassica carinata HOM05D012943 ORTHO05D027589 1.0e-13 80.9 91 44.0
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 1.0e-13 80.9 100 41.0
BcaC02g08062 Brassica carinata HOM05D009173 ORTHO05D000309 1.4e-13 80.5 100 46.0
BcaC06g34090 Brassica carinata HOM05D007774 ORTHO05D000309 2.3e-13 79.7 88 43.2
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 3.0e-13 79.3 106 43.4
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 3.0e-13 79.3 86 40.7
BcaB03g15638 Brassica carinata HOM05D008073 ORTHO05D000309 5.1e-13 78.6 153 34.0
BraA02t08177Z Brassica rapa HOM05D007774 ORTHO05D000309 5.1e-13 78.6 100 39.0
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 6.7e-13 78.2 88 47.7
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 8.8e-13 77.8 89 43.8
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-12 77.4 103 43.7
BraA02t06986Z Brassica rapa HOM05D007774 ORTHO05D000309 1.1e-12 77.4 119 37.8
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 1.5e-12 77.0 103 43.7
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 2.0e-12 76.6 88 47.7
BcaB03g16006 Brassica carinata HOM05D007774 ORTHO05D000309 2.5e-12 76.3 99 39.4
BcaB03g16083 Brassica carinata HOM05D007774 ORTHO05D000309 3.3e-12 75.9 103 42.7
BcaC02g10427 Brassica carinata HOM05D007774 ORTHO05D000309 3.3e-12 75.9 114 38.6
BcaC02g10529 Brassica carinata HOM05D007774 ORTHO05D000309 3.3e-12 75.9 100 39.0
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 4.3e-12 75.5 91 46.2
BcaC02g09596 Brassica carinata HOM05D007774 ORTHO05D000309 4.3e-12 75.5 111 38.7
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 5.7e-12 75.1 96 42.7
BcaB01g00830 Brassica carinata HOM05D008073 ORTHO05D000309 7.4e-12 74.7 166 30.1
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 7.4e-12 74.7 88 46.6
BcaB06g28160 Brassica carinata HOM05D008073 ORTHO05D000309 9.7e-12 74.3 101 41.6
A07p31530 Brassica napus HOM05D008073 ORTHO05D000309 9.7e-12 74.3 155 32.3
BcaC03g14649 Brassica carinata HOM05D008073 ORTHO05D000309 1.3e-11 73.9 168 31.0
BolC4t24443H Brassica oleracea HOM05D007774 ORTHO05D000309 1.3e-11 73.9 114 39.5
BcaB06g26984 Brassica carinata HOM05D008073 ORTHO05D000309 1.7e-11 73.6 96 42.7
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 1.7e-11 73.6 119 37.0
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 2.8e-11 72.8 83 45.8
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 2.8e-11 72.8 79 48.1
BcaB05g25086 Brassica carinata HOM05D008073 ORTHO05D000309 4.8e-11 72.0 96 42.7
C09p42360 Brassica napus HOM05D008073 ORTHO05D000309 4.8e-11 72.0 136 34.6
BolC9t57115H Brassica oleracea HOM05D008073 ORTHO05D000309 4.8e-11 72.0 136 34.6
BcaB02g11517 Brassica carinata HOM05D007774 ORTHO05D000309 6.3e-11 71.6 81 48.1
BcaB06g26508 Brassica carinata HOM05D007774 ORTHO05D000309 6.3e-11 71.6 81 48.1
BcaB06g26754 Brassica carinata HOM05D007774 ORTHO05D000309 6.3e-11 71.6 81 48.1
BcaB06g27138 Brassica carinata HOM05D007774 ORTHO05D000309 6.3e-11 71.6 81 48.1
BcaB02g11020 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-10 70.9 119 34.5
BcaB03g16062 Brassica carinata HOM05D008073 ORTHO05D000309 1.1e-10 70.9 97 39.2
BcaC03g17928 Brassica carinata HOM05D008073 ORTHO05D000309 1.1e-10 70.9 160 31.9
BcaC09g50115 Brassica carinata HOM05D008073 ORTHO05D000309 1.1e-10 70.9 160 31.2
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-10 70.9 83 41.0
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 1.1e-10 70.9 97 42.3
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-10 70.9 83 41.0
BcaB05g22492 Brassica carinata HOM05D007774 ORTHO05D000309 1.4e-10 70.5 119 36.1
BcaB05g22493 Brassica carinata HOM05D007774 ORTHO05D000309 1.4e-10 70.5 119 36.1
C07p15530 Brassica napus HOM05D008073 ORTHO05D000309 1.4e-10 70.5 141 33.3
BcaB02g11205 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-10 70.1 81 46.9
BcaB06g26683 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-10 70.1 81 46.9
BcaC04g20065 Brassica carinata HOM05D008073 ORTHO05D000309 1.8e-10 70.1 153 30.7
BcaC06g36281 Brassica carinata HOM05D008073 ORTHO05D000309 1.8e-10 70.1 129 35.7
BcaC04g20923 Brassica carinata HOM05D007774 ORTHO05D000395 2.4e-10 69.7 83 41.0
BcaC05g25280 Brassica carinata HOM05D008073 ORTHO05D000309 2.4e-10 69.7 137 32.8
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 2.4e-10 69.7 73 45.2
BolC7t41165H Brassica oleracea HOM05D007774 ORTHO05D000309 2.4e-10 69.7 73 45.2
BcaB02g11157 Brassica carinata HOM05D008073 ORTHO05D000309 3.1e-10 69.3 150 32.7
BcaB06g28129 Brassica carinata HOM05D008073 ORTHO05D000309 3.1e-10 69.3 166 30.1
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 4.1e-10 68.9 79 43.0
BcaC06g35486 Brassica carinata HOM05D008073 ORTHO05D000309 4.1e-10 68.9 141 33.3
AL8G21820 Arabidopsis lyrata HOM05D007774 ORTHO05D000309 5.3e-10 68.6 123 34.1
BcaB02g10845 Brassica carinata HOM05D008073 ORTHO05D000309 5.3e-10 68.6 165 30.9
BcaB04g19293 Brassica carinata HOM05D008073 ORTHO05D000309 5.3e-10 68.6 162 29.0
BcaC02g10455 Brassica carinata HOM05D007774 ORTHO05D000309 5.3e-10 68.6 96 40.6
BraA09t41073Z Brassica rapa HOM05D007774 ORTHO05D000309 5.3e-10 68.6 134 32.1
Sp5g18570 Schrenkiella parvula HOM05D009173 ORTHO05D000309 5.3e-10 68.6 87 42.5
BcaC04g22268 Brassica carinata HOM05D007774 ORTHO05D000309 6.9e-10 68.2 119 35.3
BcaC06g36128 Brassica carinata HOM05D007774 ORTHO05D000395 6.9e-10 68.2 73 45.2
BolC3t19468H Brassica oleracea HOM05D008073 ORTHO05D000309 6.9e-10 68.2 135 34.8
BolC7t41880H Brassica oleracea HOM05D008073 ORTHO05D000309 1.2e-09 67.4 83 39.8
BcaB02g11450 Brassica carinata HOM05D007774 ORTHO05D000309 1.5e-09 67.0 104 35.6
BolC3t19075H Brassica oleracea HOM05D007774 ORTHO05D000309 1.5e-09 67.0 119 35.3
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 2.0e-09 66.6 78 43.6
BcaC08g43129 Brassica carinata HOM05D012943 ORTHO05D039056 2.0e-09 66.6 159 30.2
BcaC01g02929 Brassica carinata HOM05D007774 ORTHO05D000309 4.5e-09 65.5 83 43.4
BcaC07g37763 Brassica carinata HOM05D008073 ORTHO05D000309 4.5e-09 65.5 96 42.7
BcaNung00231 Brassica carinata HOM05D008073 ORTHO05D000309 4.5e-09 65.5 168 33.9
A04p08080 Brassica napus HOM05D008073 ORTHO05D000309 4.5e-09 65.5 139 33.8
BolC8t48149H Brassica oleracea HOM05D008073 ORTHO05D000309 4.5e-09 65.5 96 42.7
BcaB06g26646 Brassica carinata HOM05D007774 ORTHO05D000309 5.9e-09 65.1 81 45.7
BcaC01g02160 Brassica carinata HOM05D008073 ORTHO05D000309 5.9e-09 65.1 96 41.7
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 5.9e-09 65.1 115 33.0
C03p68050 Brassica napus HOM05D008073 ORTHO05D000309 5.9e-09 65.1 96 41.7
CARHR102990 Cardamine hirsuta HOM05D009173 ORTHO05D000309 5.9e-09 65.1 74 39.2
BcaC01g01743 Brassica carinata HOM05D007774 ORTHO05D000309 7.7e-09 64.7 78 43.6
A01p24520 Brassica napus HOM05D008073 ORTHO05D000309 1.0e-08 64.3 153 32.0
BraA04t16496Z Brassica rapa HOM05D008073 ORTHO05D000309 1.3e-08 63.9 139 33.1
BcaB05g23917 Brassica carinata HOM05D007774 ORTHO05D000309 1.7e-08 63.5 120 34.2
BcaB06g27832 Brassica carinata HOM05D009173 ORTHO05D000309 1.7e-08 63.5 48 58.3
BcaB08g36585 Brassica carinata HOM05D007774 ORTHO05D000309 1.7e-08 63.5 104 35.6
BcaB06g27418 Brassica carinata HOM05D007774 ORTHO05D000309 2.2e-08 63.2 81 44.4
BcaC05g26851 Brassica carinata HOM05D007774 ORTHO05D000309 2.2e-08 63.2 67 46.3
BcaB05g23793 Brassica carinata HOM05D007774 ORTHO05D000309 2.9e-08 62.8 79 40.5
EL10Ac3g05389 Beta vulgaris HOM05D008388 ORTHO05D000309 3.8e-08 62.4 56 48.2
BcaB02g11208 Brassica carinata HOM05D007774 ORTHO05D000309 3.8e-08 62.4 81 44.4
AT5G33393 Arabidopsis thaliana HOM05D008073 ORTHO05D081038 5.0e-08 62.0 90 36.7
BcaB05g24067 Brassica carinata HOM05D008073 ORTHO05D031741 5.0e-08 62.0 160 31.2
BcaC04g20561 Brassica carinata HOM05D008073 ORTHO05D000309 5.0e-08 62.0 140 30.0
EL10Ac7g16617 Beta vulgaris HOM05D008388 ORTHO05D000309 8.5e-08 61.2 58 46.6
EL10Ac8g18741 Beta vulgaris HOM05D008388 ORTHO05D000309 8.5e-08 61.2 58 46.6
EL10As2g23187 Beta vulgaris HOM05D008388 ORTHO05D000309 8.5e-08 61.2 44 56.8
C09p42090 Brassica napus HOM05D008073 ORTHO05D000309 8.5e-08 61.2 140 30.0
AL3G12590 Arabidopsis lyrata HOM05D010286 ORTHO05D012603 1.4e-07 60.5 156 26.9
AT1G67235 Arabidopsis thaliana HOM05D008073 ORTHO05D000309 1.9e-07 60.1 173 31.2
BolC7t43639H Brassica oleracea HOM05D008073 ORTHO05D000309 1.9e-07 60.1 163 31.9
CARHR115250 Cardamine hirsuta HOM05D009173 ORTHO05D000309 1.9e-07 60.1 54 55.6
BcaB04g16980 Brassica carinata HOM05D007774 ORTHO05D000309 3.2e-07 59.3 116 35.3
BcaB01g01612 Brassica carinata HOM05D008073 ORTHO05D000309 5.5e-07 58.5 172 29.7
BcaB08g36370 Brassica carinata HOM05D008073 ORTHO05D000309 5.5e-07 58.5 173 30.6
BolC1t03302H Brassica oleracea HOM05D008073 ORTHO05D000309 5.5e-07 58.5 133 26.3
A02p37000 Brassica napus HOM05D008073 ORTHO05D000309 7.2e-07 58.2 105 34.3
BraA02t07615Z Brassica rapa HOM05D007774 ORTHO05D000309 7.2e-07 58.2 118 33.9
BraA02t08687Z Brassica rapa HOM05D008073 ORTHO05D000309 7.2e-07 58.2 105 34.3
C07p05860 Brassica napus HOM05D001957 ORTHO05D002015 9.4e-07 57.8 112 36.6
BcaB03g16072 Brassica carinata HOM05D009173 ORTHO05D000309 1.2e-06 57.4 39 56.4
BcaNung00469 Brassica carinata HOM05D008073 ORTHO05D000309 2.1e-06 56.6 85 35.3
BolC9t54764H Brassica oleracea HOM05D009173 ORTHO05D000309 2.1e-06 56.6 55 54.5
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-06 56.2 108 28.7
BcaB06g27156 Brassica carinata HOM05D008073 ORTHO05D000309 3.6e-06 55.8 153 28.1
Peaxi162Scf00562g00008 Petunia axillaris HOM05D004040 ORTHO05D000309 6.1e-06 55.1 51 49.0
Peaxi162Scf00914g00516 Petunia axillaris HOM05D004040 ORTHO05D000309 6.1e-06 55.1 51 49.0
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 6.1e-06 55.1 51 49.0
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 7.9e-06 54.7 93 35.5
SalBow3G1668 Salvia bowleyana HOM05D008544 ORTHO05D010680 7.9e-06 54.7 106 34.9


User provided reference genes

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