Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g10480 Schrenkiella parvula HOM05D006682 ORTHO05D008627 2.3e-137 492.3 257 100.0
Thhalv10010653m.g Eutrema salsugineum HOM05D006682 ORTHO05D008627 2.5e-131 472.2 257 96.1
AL5G32250 Arabidopsis lyrata HOM05D006682 ORTHO05D008627 9.4e-123 443.7 257 91.1
CARHR161420 Cardamine hirsuta HOM05D006682 ORTHO05D008627 4.7e-122 441.4 251 92.0
A09p44960 Brassica napus HOM05D006682 ORTHO05D008627 4.0e-121 438.3 257 89.5
BraA09t39955Z Brassica rapa HOM05D006682 ORTHO05D008627 4.0e-121 438.3 257 89.5
BcaB01g00476 Brassica carinata HOM05D006682 ORTHO05D008627 6.7e-121 437.6 257 89.9
BolC8t50319H Brassica oleracea HOM05D006682 ORTHO05D008627 6.7e-121 437.6 257 89.9
AT3G51790 Arabidopsis thaliana HOM05D006682 ORTHO05D008627 1.5e-120 436.4 257 90.3
C08p27040 Brassica napus HOM05D006682 ORTHO05D008627 3.3e-120 435.3 257 89.5
BcaB01g00416 Brassica carinata HOM05D006682 ORTHO05D008627 6.3e-119 431.0 257 87.9
Aa31sc655G20 Aethionema arabicum HOM05D006682 ORTHO05D008627 1.5e-107 393.3 257 81.7
THA.LOC104807019 Tarenaya hassleriana HOM05D006682 ORTHO05D008627 2.7e-106 389.0 247 83.4
PGR102G2323 Punica granatum HOM05D006682 ORTHO05D008627 4.3e-91 338.6 259 69.9
Eucgr.B03679 Eucalyptus grandis HOM05D006682 ORTHO05D008627 1.4e-89 333.6 265 67.9
Cpa.g.sc12.111 Carica papaya HOM05D006682 ORTHO05D008627 3.1e-89 332.4 251 68.9
Cpa.g.sc21.74 Carica papaya HOM05D006682 ORTHO05D008627 3.4e-88 328.9 250 69.2
Dinv36276 Davidia involucrata HOM05D006682 ORTHO05D008627 8.3e-87 324.3 256 68.8
Manes.06G166600 Manihot esculenta HOM05D006682 ORTHO05D008627 8.3e-87 324.3 257 68.5
MD03G1024200 Malus domestica HOM05D006682 ORTHO05D008627 1.9e-86 323.2 246 67.9
Prupe.6G023600 Prunus persica HOM05D006682 ORTHO05D008627 1.9e-86 323.2 250 66.4
Ciclev10012386m.g Citrus clementina HOM05D006682 ORTHO05D008627 2.4e-86 322.8 265 65.3
Lj1A355T5 Lonicera japonica HOM05D006682 ORTHO05D008627 2.4e-86 322.8 254 68.1
COL.COLO4_14494 Corchorus olitorius HOM05D006682 ORTHO05D008627 5.4e-86 321.6 243 67.5
MD11G1029300 Malus domestica HOM05D006682 ORTHO05D008627 9.2e-86 320.9 251 66.5
RcHm_v2.0_Chr5g0077121 Rosa chinensis HOM05D006682 ORTHO05D008627 1.6e-85 320.1 248 68.5
Haze_23101 Corylus avellana HOM05D006682 ORTHO05D008627 2.0e-85 319.7 253 67.6
Gohir.A01G228400 Gossypium hirsutum HOM05D006682 ORTHO05D008627 2.0e-85 319.7 248 69.0
FAN11G1823 Fragaria x ananassa HOM05D006682 ORTHO05D008627 3.5e-85 318.9 247 68.4
Gohir.D01G218300 Gossypium hirsutum HOM05D006682 ORTHO05D008627 1.0e-84 317.4 248 68.5
Gorai.002G265000 Gossypium raimondii HOM05D006682 ORTHO05D008627 1.0e-84 317.4 248 68.5
FAN21G3201 Fragaria x ananassa HOM05D006682 ORTHO05D008627 2.3e-84 316.2 267 65.5
FAN25G2895 Fragaria x ananassa HOM05D006682 ORTHO05D008627 2.3e-84 316.2 263 66.5
Thecc.05G010600 Theobroma cacao HOM05D006682 ORTHO05D008627 2.3e-84 316.2 255 67.5
CiPaw.13G163300 Carya illinoinensis HOM05D006682 ORTHO05D008627 3.0e-84 315.8 247 69.6
FvH4_3g43060 Fragaria vesca HOM05D006682 ORTHO05D008627 3.9e-84 315.5 245 67.3
Duzib128G1702 Durio zibethinus HOM05D006682 ORTHO05D008627 6.6e-84 314.7 244 66.8
FAN16G2773 Fragaria x ananassa HOM05D006682 ORTHO05D008627 6.6e-84 314.7 266 66.2
Cfa009742 Carpinus fangiana HOM05D006682 ORTHO05D008627 2.5e-83 312.8 253 66.8
Hma1.2p1_0401F.1_g144700 Hydrangea macrophylla HOM05D006682 ORTHO05D008627 9.5e-83 310.8 190 82.6
Lsat_1_v5_gn_8_74980 Lactuca sativa HOM05D006682 ORTHO05D008627 9.5e-83 310.8 261 64.4
CSS0008647 Camellia sinensis var. sinensis HOM05D006682 ORTHO05D008627 1.6e-82 310.1 262 66.4
Lalb_Chr08g0245621 Lupinus albus HOM05D006682 ORTHO05D008627 1.6e-82 310.1 258 66.7
arahy.Tifrunner.gnm1.ann1.1N3H6Z Arachis hypogaea HOM05D006682 ORTHO05D008627 2.1e-82 309.7 263 65.8
Sabra03G0151700 Salix brachista HOM05D006682 ORTHO05D008627 8.1e-82 307.8 253 66.4
TAR623G0396 Trochodendron aralioides HOM05D006682 ORTHO05D008627 1.1e-81 307.4 265 64.5
Potri.003G205200 Populus trichocarpa HOM05D006682 ORTHO05D008627 1.4e-81 307.0 218 73.4
TWI38G0692 Tripterygium wilfordii HOM05D006682 ORTHO05D008627 1.4e-81 307.0 264 65.2
QL01p005270 Quercus lobata HOM05D006682 ORTHO05D008627 3.1e-81 305.8 247 66.0
ECA233G5908 Erigeron canadensis HOM05D006682 ORTHO05D008627 4.0e-81 305.4 190 77.4
TAR623G0191 Trochodendron aralioides HOM05D006682 ORTHO05D008627 5.2e-81 305.1 266 64.3
arahy.Tifrunner.gnm1.ann1.11YZMF Arachis hypogaea HOM05D006682 ORTHO05D008627 1.5e-80 303.5 267 64.4
ClCG03G013350 Citrullus lanatus HOM05D006682 ORTHO05D008627 9.8e-80 300.8 243 66.3
CDE04G1557 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 2.9e-79 299.3 203 70.0
CsaV3_1G042700 Cucumis sativus L. HOM05D006682 ORTHO05D008627 4.9e-79 298.5 256 62.9
Sc16g0009700 Simmondsia chinensis HOM05D006682 ORTHO05D008627 4.9e-79 298.5 210 71.9
CANSAT80G0450 Cannabis sativa HOM05D006682 ORTHO05D008627 1.1e-78 297.4 258 61.6
Actinidia16314 Actinidia chinensis HOM05D006682 ORTHO05D008627 1.4e-78 297.0 253 62.1
MELO3C015204.2 Cucumis melo HOM05D006682 ORTHO05D008627 1.4e-78 297.0 256 63.3
Phvul.011G058400 Phaseolus vulgaris HOM05D006682 ORTHO05D008627 1.9e-78 296.6 256 64.5
Rhsim13G0223700 Rhododendron simsii HOM05D006682 ORTHO05D008627 1.9e-78 296.6 256 65.6
Nn3g18894 Nelumbo nucifera HOM05D006682 ORTHO05D008627 2.4e-78 296.2 192 76.6
CDE03G0115 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 4.1e-78 295.4 245 62.0
Glyma.12G056800 Glycine max HOM05D006682 ORTHO05D008627 4.1e-78 295.4 202 74.3
Sed0028089 Sechium edule HOM05D006682 ORTHO05D008627 4.1e-78 295.4 250 64.8
Glyma.11G132200 Glycine max HOM05D006682 ORTHO05D008627 5.4e-78 295.0 203 74.4
VMungo1127G1130 Vigna mungo HOM05D006682 ORTHO05D008627 1.6e-77 293.5 255 64.3
MBI13_g31544_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 3.5e-77 292.4 245 65.3
EL10Ac3g05849 Beta vulgaris HOM05D006682 ORTHO05D008627 1.3e-76 290.4 251 64.9
Aqoxy2G00055 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 1.7e-76 290.0 235 64.3
Lj3g0017048 Lotus japonicus HOM05D006682 ORTHO05D008627 3.0e-76 289.3 259 61.4
Ah.13g066750 Amaranthus hybridus HOM05D006682 ORTHO05D008627 1.5e-75 287.0 243 63.4
SHI11277 Sapria himalayana HOM05D006682 ORTHO05D008627 7.3e-75 284.6 220 65.9
MSTRG.18416 Avicennia marina HOM05D006682 ORTHO05D008627 9.5e-75 284.3 273 58.2
Psat7g213040 Pisum sativum HOM05D006682 ORTHO05D008627 9.5e-75 284.3 255 62.4
Ca_20573_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 1.6e-74 283.5 247 61.9
Ca_30508_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 1.6e-74 283.5 247 61.9
Medtr4g065610 Medicago truncatula HOM05D006682 ORTHO05D008627 1.1e-73 280.8 255 60.4
Os10g0545800 Oryza sativa ssp. japonica HOM05D006682 ORTHO05D008627 7.6e-72 274.6 237 61.6
Manes.14G001136 Manihot esculenta HOM05D006682 ORTHO05D008627 9.9e-72 274.2 245 62.4
Solyc09g005870.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 1.7e-71 273.5 245 61.6
Cc00_g20370 Coffea canephora HOM05D006682 ORTHO05D008627 2.9e-71 272.7 203 67.5
Sopen03g006750 Solanum pennellii HOM05D006682 ORTHO05D008627 6.4e-71 271.6 271 56.8
Nitab4.5_0002026g0020 Nicotiana tabacum HOM05D006682 ORTHO05D008627 1.4e-70 270.4 259 58.3
PGSC0003DMG400023913 Solanum tuberosum HOM05D006682 ORTHO05D008627 1.9e-70 270.0 239 62.3
Solyc03g033990.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 2.4e-70 269.6 271 56.8
CAN.G350.11 Capsicum annuum HOM05D006682 ORTHO05D008627 4.1e-70 268.9 271 57.2
Sopen09g001750 Solanum pennellii HOM05D006682 ORTHO05D008627 5.4e-70 268.5 245 60.8
PGSC0003DMG400009816 Solanum tuberosum HOM05D006682 ORTHO05D008627 9.2e-70 267.7 240 62.1
Migut.O00578 Erythranthe guttata HOM05D006682 ORTHO05D008627 1.2e-69 267.3 193 68.4
ATR0605G320 Amborella trichopoda HOM05D006682 ORTHO05D008627 2.7e-69 266.2 261 58.2
SalBow8G0417 Salvia bowleyana HOM05D006682 ORTHO05D008627 2.7e-69 266.2 261 57.9
SalBow5G1085 Salvia bowleyana HOM05D006682 ORTHO05D008627 3.5e-69 265.8 278 55.4
DCAR_014742 Daucus carota HOM05D006682 ORTHO05D008627 6.0e-69 265.0 181 74.0
SGA_v2.0_scaffold42G16114 Striga asiatica HOM05D006682 ORTHO05D008627 3.9e-68 262.3 264 57.2
Lj3P268T21 Lonicera japonica HOM05D006682 ORTHO05D008627 2.1e-66 256.5 167 79.0
HPP92_017841 Vanilla planifolia HOM05D006682 ORTHO05D008627 3.6e-66 255.8 257 57.6
SEGI_12993 Sequoiadendron giganteum HOM05D006682 ORTHO05D008627 8.1e-66 254.6 183 68.3
PSO339G5979 Papaver somniferum HOM05D006682 ORTHO05D008627 1.1e-65 254.2 188 65.4
AUR62015492 Chenopodium quinoa HOM05D006682 ORTHO05D008627 1.4e-65 253.8 230 61.3
PSO384G2735 Papaver somniferum HOM05D006682 ORTHO05D008627 8.9e-65 251.1 217 59.9
SGA_v2.0_scaffold4G02325 Striga asiatica HOM05D006682 ORTHO05D008627 8.9e-65 251.1 251 58.2
Zm00001eb022720 Zea mays HOM05D006682 ORTHO05D008627 4.4e-64 248.8 232 58.6
Zm00001eb394030 Zea mays HOM05D006682 ORTHO05D008627 4.4e-64 248.8 246 55.7
TPR.G35025 Trifolium pratense HOM05D006682 ORTHO05D008627 2.9e-63 246.1 269 53.9
Psat7g244600 Pisum sativum HOM05D006682 ORTHO05D008627 6.9e-57 224.9 210 59.5
Pp3c14_20080 Physcomitrium patens HOM05D006682 ORTHO05D008627 2.9e-55 219.5 183 59.6
unitig_26.g10134 Utricularia gibba HOM05D006682 ORTHO05D008627 3.8e-55 219.2 194 60.3
Mapoly0003s0021 Marchantia polymorpha HOM05D006682 ORTHO05D008627 1.1e-54 217.6 175 60.6
Carub.0005s1814 Capsella rubella HOM05D006682 ORTHO05D008627 7.1e-54 214.9 128 86.7
AUR62002207 Chenopodium quinoa HOM05D006072 ORTHO05D007363 2.1e-53 213.4 149 71.8
HanXRQChr17g0534121 Helianthus annuus HOM05D006682 ORTHO05D008627 3.7e-50 202.6 180 62.8
Nitab4.5_0000492g0110 Nicotiana tabacum HOM05D006682 ORTHO05D008627 3.8e-31 139.4 102 69.6
GSVIVG01025303001 Vitis vinifera HOM05D006682 ORTHO05D008627 3.8e-23 112.8 95 63.2
EL10Ac6g14324 Beta vulgaris HOM05D006682 ORTHO05D007363 1.5e-19 100.9 71 67.6
CBR_g49935 Chara braunii HOM05D000019 ORTHO05D000048 5.3e-17 92.4 127 40.2
CBR_g49937 Chara braunii HOM05D000019 ORTHO05D000002 3.4e-16 89.7 79 46.8
MBI13_g31542_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 3.4e-16 89.7 71 60.6
Aqoxy4G00577 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 2.4e-09 67.0 54 61.1
Peaxi162Scf00029g00296 Petunia axillaris HOM05D006682 ORTHO05D008627 2.4e-09 67.0 49 65.3
Actinidia06890 Actinidia chinensis HOM05D006682 ORTHO05D054450 4.5e-08 62.8 107 40.2
MBI13_g31543_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 6.5e-07 58.9 38 60.5


User provided reference genes

Program Settings