Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g10020 Schrenkiella parvula HOM05D005926 ORTHO05D007001 0.0e+00 1309.7 690 100.0
AL5G32830 Arabidopsis lyrata HOM05D005926 ORTHO05D007001 1.4e-285 986.1 693 76.6
BcaB02g08582 Brassica carinata HOM05D005926 ORTHO05D007001 2.3e-272 942.2 696 77.3
Carub.0005s1860 Capsella rubella HOM05D005926 ORTHO05D007001 5.6e-271 937.6 697 74.0
AT3G52240 Arabidopsis thaliana HOM05D005926 ORTHO05D007001 1.1e-269 933.3 691 73.7
CARHR161990 Cardamine hirsuta HOM05D005926 ORTHO05D007001 1.8e-261 906.0 692 73.3
Thhalv10010215m.g Eutrema salsugineum HOM05D005926 ORTHO05D007001 1.8e-261 906.0 627 79.6
BraA04t16409Z Brassica rapa HOM05D005926 ORTHO05D007001 1.4e-253 879.8 696 74.3
A04p07120 Brassica napus HOM05D005926 ORTHO05D007001 1.8e-253 879.4 695 74.2
BcaC02g09269 Brassica carinata HOM05D005926 ORTHO05D007001 2.4e-237 825.9 698 71.5
C04p40700 Brassica napus HOM05D005926 ORTHO05D007001 1.9e-234 816.2 699 71.1
A09p45300 Brassica napus HOM05D005926 ORTHO05D007001 6.7e-232 807.7 696 69.4
BolC4t25653H Brassica oleracea HOM05D005926 ORTHO05D007001 1.9e-231 806.2 682 71.6
C08p27480 Brassica napus HOM05D005926 ORTHO05D007001 3.3e-231 805.4 698 69.3
BolC8t50365H Brassica oleracea HOM05D005926 ORTHO05D007001 3.3e-231 805.4 698 69.3
BraA09t39993Z Brassica rapa HOM05D005926 ORTHO05D007001 1.3e-230 803.5 696 69.0
BcaC07g39594 Brassica carinata HOM05D005926 ORTHO05D007001 5.8e-220 768.1 697 67.0
Aa31LG10G7340 Aethionema arabicum HOM05D005926 ORTHO05D007001 6.7e-208 728.0 692 61.3
THA.LOC104814724 Tarenaya hassleriana HOM05D005926 ORTHO05D007001 6.4e-126 455.7 722 45.6
COL.COLO4_06813 Corchorus olitorius HOM05D005926 ORTHO05D007001 3.2e-61 240.7 726 33.6
Ciclev10030805m.g Citrus clementina HOM05D005926 ORTHO05D007001 2.7e-60 237.7 633 34.1
Thecc.10G111000 Theobroma cacao HOM05D005926 ORTHO05D007001 5.7e-58 229.9 731 31.3
Prupe.2G085400 Prunus persica HOM05D005926 ORTHO05D007001 7.5e-58 229.6 570 35.6
CsaV3_6G004110 Cucumis sativus L. HOM05D005926 ORTHO05D007001 2.2e-57 228.0 592 35.5
Manes.07G090100 Manihot esculenta HOM05D005926 ORTHO05D007001 2.8e-57 227.6 657 32.6
CiPaw.14G029200 Carya illinoinensis HOM05D005926 ORTHO05D007001 6.3e-57 226.5 590 34.1
ClCG08G008140 Citrullus lanatus HOM05D005926 ORTHO05D007001 1.8e-56 224.9 600 35.3
QL04p042256 Quercus lobata HOM05D005926 ORTHO05D007001 1.8e-56 224.9 647 32.3
CANSAT56G4130 Cannabis sativa HOM05D005926 ORTHO05D007001 9.2e-56 222.6 596 34.1
Duzib128G1763 Durio zibethinus HOM05D005926 ORTHO05D007001 9.2e-56 222.6 721 31.8
MD02G1248000 Malus domestica HOM05D005926 ORTHO05D007001 1.7e-54 218.4 590 33.4
FAN10G2760 Fragaria x ananassa HOM05D005926 ORTHO05D007001 1.5e-53 215.3 644 31.8
Gorai.012G020100 Gossypium raimondii HOM05D005926 ORTHO05D007001 1.9e-53 214.9 676 32.0
Gohir.A05G398500 Gossypium hirsutum HOM05D005926 ORTHO05D007001 4.3e-53 213.8 668 32.2
FvH4_7g05860 Fragaria vesca HOM05D005926 ORTHO05D007001 7.3e-53 213.0 605 33.4
MELO3C019887.2 Cucumis melo HOM05D005926 ORTHO05D007001 3.6e-52 210.7 607 33.6
Gohir.D04G017400 Gossypium hirsutum HOM05D005926 ORTHO05D007001 3.6e-52 210.7 656 31.9
Atru.chr12.975 Acer truncatum HOM05D005926 ORTHO05D007001 1.4e-51 208.8 605 33.6
MD07G1068100 Malus domestica HOM05D005926 ORTHO05D007001 3.0e-51 207.6 593 33.1
FAN03G1852 Fragaria x ananassa HOM05D005926 ORTHO05D007001 4.0e-51 207.2 602 32.9
RcHm_v2.0_Chr1g0333121 Rosa chinensis HOM05D005926 ORTHO05D007001 5.2e-51 206.8 608 33.1
Duzib106G0448 Durio zibethinus HOM05D005926 ORTHO05D007001 2.9e-49 201.1 617 31.6
TWI63G0673 Tripterygium wilfordii HOM05D005926 ORTHO05D007001 1.4e-48 198.7 576 32.8
GSVIVG01034734001 Vitis vinifera HOM05D005926 ORTHO05D007001 1.6e-47 195.3 611 31.9
PGR142G4330 Punica granatum HOM05D005926 ORTHO05D007001 2.0e-47 194.9 623 32.1
Nitab4.5_0001027g0040 Nicotiana tabacum HOM05D005926 ORTHO05D007001 2.7e-47 194.5 726 30.4
Lj5g0002236 Lotus japonicus HOM05D005926 ORTHO05D007001 1.3e-46 192.2 639 30.4
Ca_10497_v3 Cicer arietinum L. HOM05D005926 ORTHO05D007001 3.9e-46 190.7 558 33.3
Eucgr.G02709 Eucalyptus grandis HOM05D005926 ORTHO05D007001 1.1e-45 189.1 606 32.3
TPR.G2562 Trifolium pratense HOM05D005926 ORTHO05D007001 1.1e-45 189.1 640 30.5
Nitab4.5_0003396g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 9.5e-45 186.0 549 32.4
Potri.008G025000 Populus trichocarpa HOM05D005926 ORTHO05D007001 9.5e-45 186.0 596 30.9
Sabra10G0182600 Salix brachista HOM05D005926 ORTHO05D007001 6.2e-44 183.3 712 28.8
CSS0031564 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.4e-43 182.2 629 29.9
Medtr1g492840 Medicago truncatula HOM05D005926 ORTHO05D007001 2.3e-43 181.4 647 30.0
Psat6g176680 Pisum sativum HOM05D005926 ORTHO05D007001 3.1e-43 181.0 552 32.1
Nn2g14047 Nelumbo nucifera HOM05D005926 ORTHO05D007001 5.2e-43 180.3 621 31.6
Cc02_g10060 Coffea canephora HOM05D005926 ORTHO05D007001 8.9e-43 179.5 660 30.5
Lj2C28T9 Lonicera japonica HOM05D005926 ORTHO05D007001 1.2e-42 179.1 560 32.1
Rhsim03G0105700 Rhododendron simsii HOM05D005926 ORTHO05D007001 2.0e-42 178.3 629 29.1
Sabra08G0016800 Salix brachista HOM05D005926 ORTHO05D007001 4.4e-42 177.2 693 29.3
vmacro07227 Vaccinium macrocarpon HOM05D005926 ORTHO05D007001 1.7e-41 175.3 626 29.7
Dinv30648 Davidia involucrata HOM05D005926 ORTHO05D007001 2.9e-41 174.5 808 28.7
Peaxi162Scf00004g00119 Petunia axillaris HOM05D005926 ORTHO05D007001 6.4e-41 173.3 558 31.7
Sed0009709 Sechium edule HOM05D005926 ORTHO05D007001 6.4e-41 173.3 627 32.2
Cpa.g.sc19.23 Carica papaya HOM05D005926 ORTHO05D007001 1.1e-40 172.6 829 27.6
Lalb_Chr03g0036371 Lupinus albus HOM05D005926 ORTHO05D007001 1.1e-40 172.6 568 32.4
Glyma.20G187800 Glycine max HOM05D005926 ORTHO05D007001 1.4e-40 172.2 561 31.0
Phvul.007G104500 Phaseolus vulgaris HOM05D005926 ORTHO05D007001 1.4e-40 172.2 559 31.1
CSS0031315 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 4.1e-40 170.6 639 29.0
Glyma.10G202600 Glycine max HOM05D005926 ORTHO05D007001 4.1e-40 170.6 559 31.3
Actinidia18581 Actinidia chinensis HOM05D005926 ORTHO05D007001 3.5e-39 167.5 576 29.0
DCAR_014349 Daucus carota HOM05D005926 ORTHO05D007001 3.5e-39 167.5 541 32.9
PGSC0003DMG400023487 Solanum tuberosum HOM05D005926 ORTHO05D007001 2.3e-38 164.9 586 29.7
Nitab4.5_0002878g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 6.6e-38 163.3 562 30.4
Sed0000046 Sechium edule HOM05D005926 ORTHO05D007001 2.5e-37 161.4 515 30.9
Solyc05g055360.4 Solanum lycopersicum HOM05D005926 ORTHO05D007001 3.3e-37 161.0 584 29.8
Nn6g35019 Nelumbo nucifera HOM05D005926 ORTHO05D007001 9.5e-37 159.5 598 29.4
Sopen05g033810 Solanum pennellii HOM05D005926 ORTHO05D007001 1.1e-35 156.0 601 29.3
CAN.G1550.12 Capsicum annuum HOM05D005926 ORTHO05D007001 1.4e-35 155.6 560 30.5
Nitab4.5_0012334g0010 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.4e-35 155.6 556 29.3
arahy.Tifrunner.gnm1.ann1.J9ASUV Arachis hypogaea HOM05D005926 ORTHO05D007001 6.8e-35 153.3 551 31.0
Sc06g0002210 Simmondsia chinensis HOM05D005926 ORTHO05D007001 8.9e-35 152.9 535 29.2
TAR623G1319 Trochodendron aralioides HOM05D005926 ORTHO05D007001 1.5e-34 152.1 589 28.0
Migut.F00893 Erythranthe guttata HOM05D005926 ORTHO05D007001 2.0e-34 151.8 553 30.2
Aqoxy4G02869 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 4.4e-34 150.6 591 30.3
SalBow6G1645 Salvia bowleyana HOM05D005926 ORTHO05D007001 1.3e-33 149.1 632 29.3
TAR636G3019 Trochodendron aralioides HOM05D005926 ORTHO05D007001 1.3e-33 149.1 454 30.6
Aqoxy2G01361 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 2.9e-33 147.9 549 28.1
PGSC0003DMG400027309 Solanum tuberosum HOM05D005926 ORTHO05D007001 2.9e-33 147.9 534 29.8
Solyc11g007510.2 Solanum lycopersicum HOM05D005926 ORTHO05D007001 1.1e-32 146.0 531 29.6
HanXRQChr05g0147041 Helianthus annuus HOM05D005926 ORTHO05D007001 1.4e-32 145.6 546 29.3
Haze_02593 Corylus avellana HOM05D005926 ORTHO05D007001 9.2e-32 142.9 294 38.1
Ah.04g163700 Amaranthus hybridus HOM05D005926 ORTHO05D007001 3.5e-31 141.0 554 28.3
Hma1.2p1_0010F.1_g007030 Hydrangea macrophylla HOM05D005926 ORTHO05D007001 1.0e-30 139.4 465 31.8
Actinidia28534 Actinidia chinensis HOM05D005926 ORTHO05D007001 3.0e-30 137.9 553 28.9
ECA232G4290 Erigeron canadensis HOM05D005926 ORTHO05D007001 3.0e-30 137.9 603 27.9
Sopen11g003350 Solanum pennellii HOM05D005926 ORTHO05D007001 3.9e-30 137.5 500 29.6
TAR369G1114 Trochodendron aralioides HOM05D005926 ORTHO05D007001 5.1e-30 137.1 488 30.9
CSS0037332 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 6.6e-30 136.7 696 26.9
PSO384G0761 Papaver somniferum HOM05D005926 ORTHO05D007001 1.1e-29 136.0 541 29.9
VMungo0720G0267 Vigna mungo HOM05D005926 ORTHO05D007001 1.1e-29 136.0 591 27.9
CSS0015422 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.2e-28 132.5 679 26.2
PSO339G4155 Papaver somniferum HOM05D005926 ORTHO05D007001 1.2e-28 132.5 538 28.8
SGA_v2.0_scaffold62G21348 Striga asiatica HOM05D005926 ORTHO05D007001 1.6e-28 132.1 385 31.7
Lsat_1_v5_gn_6_90261 Lactuca sativa HOM05D005926 ORTHO05D007001 8.1e-28 129.8 494 30.4
EL10Ac4g08669 Beta vulgaris HOM05D005926 ORTHO05D007001 2.9e-25 121.3 557 29.6
PSO443G0029 Papaver somniferum HOM05D005926 ORTHO05D007001 1.9e-24 118.6 350 34.6
Os05g0445800 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 4.1e-24 117.5 308 34.4
AUR62041545 Chenopodium quinoa HOM05D005926 ORTHO05D007001 2.1e-23 115.2 616 27.6
Dinv20819 Davidia involucrata HOM05D005926 ORTHO05D007001 4.3e-21 107.5 388 30.2
Os05g0446500 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 1.2e-20 105.9 603 27.0
Zm00001eb147390 Zea mays HOM05D005926 ORTHO05D007001 2.6e-18 98.2 282 34.0
Zm00001eb289020 Zea mays HOM05D005926 ORTHO05D007001 2.6e-18 98.2 615 25.5
arahy.Tifrunner.gnm1.ann1.9BC44J Arachis hypogaea HOM05D005926 ORTHO05D007001 4.9e-17 94.0 498 27.1
GSVIVG01031385001 Vitis vinifera HOM05D005926 ORTHO05D007001 1.6e-15 89.0 441 28.6
HPP92_002057 Vanilla planifolia HOM05D005926 ORTHO05D007001 3.5e-15 87.8 190 37.4
CDE04G2986 Ceratophyllum demersum HOM05D005926 ORTHO05D007001 7.3e-13 80.1 584 24.1
Os04g0646050 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 9.6e-13 79.7 150 36.0
unitig_0.g760 Utricularia gibba HOM05D005926 ORTHO05D007001 2.1e-12 78.6 185 34.1
BolC2t10428H Brassica oleracea HOM05D005926 ORTHO05D007001 3.8e-09 67.8 54 66.7
SEGI_23583 Sequoiadendron giganteum HOM05D005926 ORTHO05D007001 4.2e-08 64.3 213 31.0
ATR0820G003 Amborella trichopoda HOM05D005926 ORTHO05D007001 2.3e-06 58.5 571 23.1
Pp3c6_4890 Physcomitrium patens HOM05D031130 ORTHO05D019295 3.9e-06 57.8 69 47.8


User provided reference genes

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