Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g09820 Schrenkiella parvula HOM05D007532 ORTHO05D009483 7.8e-99 364.0 211 100.0
AL5G33190 Arabidopsis lyrata HOM05D007532 ORTHO05D009483 1.5e-81 306.6 210 73.3
BcaB01g00362 Brassica carinata HOM05D007532 ORTHO05D009483 1.5e-81 306.6 214 73.8
Thhalv10010711m.g Eutrema salsugineum HOM05D007532 ORTHO05D009483 1.1e-79 300.4 217 71.9
AT3G52480 Arabidopsis thaliana HOM05D007532 ORTHO05D009483 5.2e-79 298.1 211 71.1
BcaC07g39613 Brassica carinata HOM05D007532 ORTHO05D009483 1.3e-77 293.5 209 71.8
BolC8t50392H Brassica oleracea HOM05D007532 ORTHO05D009483 1.3e-77 293.5 209 71.8
A09p45610 Brassica napus HOM05D007532 ORTHO05D009483 4.9e-77 291.6 209 73.7
C08p27760 Brassica napus HOM05D007532 ORTHO05D009483 8.4e-77 290.8 209 71.3
BraA09t40022Z Brassica rapa HOM05D007532 ORTHO05D009483 1.1e-76 290.4 209 73.2
CARHR162250 Cardamine hirsuta HOM05D007532 ORTHO05D009483 1.9e-73 279.6 220 69.1
Carub.0005s1887 Capsella rubella HOM05D007532 ORTHO05D009483 1.1e-71 273.9 214 68.2
Aa31LG10G7530 Aethionema arabicum HOM05D007532 ORTHO05D009483 6.5e-45 184.9 215 52.6
Manes.09G046800 Manihot esculenta HOM05D007532 ORTHO05D009483 4.4e-17 92.4 206 36.4
Cpa.g.sc104.49 Carica papaya HOM05D007532 ORTHO05D009483 7.5e-17 91.7 220 33.2
COL.COLO4_29593 Corchorus olitorius HOM05D007532 ORTHO05D009483 2.4e-15 86.7 209 31.6
Gohir.A09G135100 Gossypium hirsutum HOM05D007532 ORTHO05D009483 7.0e-15 85.1 207 32.9
TAR623G0884 Trochodendron aralioides HOM05D007532 ORTHO05D009483 7.0e-15 85.1 207 36.2
Gohir.D09G131700 Gossypium hirsutum HOM05D007532 ORTHO05D009483 9.1e-15 84.7 207 34.3
Gorai.006G150300 Gossypium raimondii HOM05D007532 ORTHO05D009483 1.2e-14 84.3 207 34.3
Thecc.05G102000 Theobroma cacao HOM05D007532 ORTHO05D009483 2.2e-13 80.1 212 32.5
Ciclev10012763m.g Citrus clementina HOM05D007532 ORTHO05D009483 5.0e-13 79.0 215 37.7
Potri.016G071700 Populus trichocarpa HOM05D007532 ORTHO05D009483 8.5e-13 78.2 211 34.1
Cfa016678 Carpinus fangiana HOM05D007532 ORTHO05D009483 1.5e-12 77.4 208 32.2
Duzib128G1100 Durio zibethinus HOM05D007532 ORTHO05D009483 1.2e-11 74.3 213 31.0
TWI74G0748 Tripterygium wilfordii HOM05D007532 ORTHO05D009483 1.6e-11 73.9 198 33.8
Haze_19695 Corylus avellana HOM05D007532 ORTHO05D009483 3.6e-11 72.8 202 31.2
PGR004G2296 Punica granatum HOM05D007532 ORTHO05D009483 4.7e-11 72.4 216 30.1
Atru.chr8.1383 Acer truncatum HOM05D007532 ORTHO05D009483 3.0e-10 69.7 198 30.8
Nn6g34736 Nelumbo nucifera HOM05D007532 ORTHO05D009483 4.0e-10 69.3 204 31.9
Oeu045039.1 Olea europaea HOM05D007532 ORTHO05D009483 1.2e-09 67.8 221 27.1
Sabra06G0157400 Salix brachista HOM05D007532 ORTHO05D009483 2.0e-09 67.0 228 32.0
Potri.006G204400 Populus trichocarpa HOM05D007532 ORTHO05D009483 2.6e-09 66.6 223 32.7
CANSAT64G0088 Cannabis sativa HOM05D007532 ORTHO05D009483 4.4e-09 65.9 214 26.6
MBI17_g22147_MAGBIO Magnolia biondii HOM05D007532 ORTHO05D009483 4.4e-09 65.9 213 33.3
Duzib106G1076 Durio zibethinus HOM05D007532 ORTHO05D009483 5.7e-09 65.5 205 31.2
CiPaw.10G016200 Carya illinoinensis HOM05D007532 ORTHO05D009483 1.7e-08 63.9 200 32.0
GSVIVG01033946001 Vitis vinifera HOM05D007532 ORTHO05D009483 1.7e-08 63.9 205 30.2
Dinv31750 Davidia involucrata HOM05D010118 ORTHO05D009483 4.8e-08 62.4 159 37.7
Duzib093G1477 Durio zibethinus HOM05D007532 ORTHO05D009483 6.3e-08 62.0 202 28.2
Sabra16G0072100 Salix brachista HOM05D007532 ORTHO05D009483 8.3e-08 61.6 208 30.8
Manes.08G032400 Manihot esculenta HOM05D007532 ORTHO05D009483 1.1e-07 61.2 199 29.1
THA.LOC104824551 Tarenaya hassleriana HOM05D007532 ORTHO05D009483 1.4e-07 60.8 213 27.7
Sabra16G0073900 Salix brachista HOM05D007532 ORTHO05D009483 2.4e-07 60.1 217 30.4
TWI77G0050 Tripterygium wilfordii HOM05D007532 ORTHO05D009483 2.4e-07 60.1 151 35.8
Oeu035652.1 Olea europaea HOM05D007532 ORTHO05D009483 1.6e-06 57.4 215 33.0
Lsat_1_v5_gn_1_57140 Lactuca sativa HOM05D007532 ORTHO05D009483 2.0e-06 57.0 211 28.9
MSTRG.10404 Avicennia marina HOM05D007532 ORTHO05D009483 5.9e-06 55.5 207 28.0


User provided reference genes

Program Settings