Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08557 Brassica carinata HOM05D003756 ORTHO05D004304 5.9e-32 140.2 68 100.0
Sp5g09600 Schrenkiella parvula HOM05D003756 ORTHO05D004304 5.9e-32 140.2 68 100.0
BcaC02g09226 Brassica carinata HOM05D003756 ORTHO05D004304 7.7e-32 139.8 68 98.5
C04p40240 Brassica napus HOM05D003756 ORTHO05D004304 7.7e-32 139.8 68 98.5
BolC4t25600H Brassica oleracea HOM05D003756 ORTHO05D004304 7.7e-32 139.8 68 98.5
A04p06750 Brassica napus HOM05D003756 ORTHO05D004304 1.0e-31 139.4 68 97.1
BcaB02g07820 Brassica carinata HOM05D003756 ORTHO05D004304 1.3e-31 139.0 68 98.5
Thhalv10010889m.g Eutrema salsugineum HOM05D003756 ORTHO05D004304 1.6e-29 132.1 68 94.1
Aa31LG5G21370 Aethionema arabicum HOM05D003756 ORTHO05D004304 3.6e-29 131.0 66 92.4
AL5G33490 Arabidopsis lyrata HOM05D003756 ORTHO05D004304 1.8e-28 128.6 66 90.9
AT3G52730 Arabidopsis thaliana HOM05D003756 ORTHO05D004304 1.8e-28 128.6 66 90.9
Carub.0005s1918 Capsella rubella HOM05D003756 ORTHO05D004304 1.8e-28 128.6 66 90.9
CARHR162600 Cardamine hirsuta HOM05D003756 ORTHO05D004304 1.8e-28 128.6 66 90.9
BcaB01g00346 Brassica carinata HOM05D003756 ORTHO05D004304 2.6e-27 124.8 61 98.4
BcaC07g39638 Brassica carinata HOM05D003756 ORTHO05D004304 2.6e-27 124.8 61 98.4
A09p45820 Brassica napus HOM05D003756 ORTHO05D004304 2.6e-27 124.8 61 98.4
C08p28010 Brassica napus HOM05D003756 ORTHO05D004304 2.6e-27 124.8 61 98.4
BolC8t50413H Brassica oleracea HOM05D003756 ORTHO05D004304 2.6e-27 124.8 61 98.4
BraA09t40043Z Brassica rapa HOM05D003756 ORTHO05D004304 2.6e-27 124.8 61 98.4
THA.LOC104823490 Tarenaya hassleriana HOM05D003756 ORTHO05D004304 1.7e-26 122.1 66 86.4
THA.LOC104804928 Tarenaya hassleriana HOM05D003756 ORTHO05D004304 2.8e-26 121.3 66 86.4
Peaxi162Scf00003g00522 Petunia axillaris HOM05D003756 ORTHO05D004304 1.4e-25 119.0 63 85.7
THA.LOC104799762 Tarenaya hassleriana HOM05D003756 ORTHO05D004304 2.4e-25 118.2 66 84.8
TWI74G1420 Tripterygium wilfordii HOM05D003756 ORTHO05D004304 9.1e-25 116.3 66 81.8
MELO3C009472.2 Cucumis melo HOM05D003756 ORTHO05D004304 1.6e-24 115.5 63 87.3
CsaV3_3G037270 Cucumis sativus L. HOM05D003756 ORTHO05D004304 1.6e-24 115.5 63 87.3
Lj6g0015332 Lotus japonicus HOM05D003756 ORTHO05D004304 1.6e-24 115.5 63 85.7
Ca_09004_v3 Cicer arietinum L. HOM05D003756 ORTHO05D004304 3.5e-24 114.4 63 82.5
Psat3g033400 Pisum sativum HOM05D003756 ORTHO05D004304 3.5e-24 114.4 63 81.0
ClCG10G018980 Citrullus lanatus HOM05D003756 ORTHO05D004304 4.5e-24 114.0 63 87.3
MELO3C024548.2 Cucumis melo HOM05D003756 ORTHO05D004304 5.9e-24 113.6 63 87.3
Medtr7g104570 Medicago truncatula HOM05D003756 ORTHO05D004304 5.9e-24 113.6 63 81.0
Nitab4.5_0000755g0180 Nicotiana tabacum HOM05D003756 ORTHO05D004304 5.9e-24 113.6 61 85.2
Prupe.1G506800 Prunus persica HOM05D003756 ORTHO05D004304 7.7e-24 113.2 63 84.1
Prupe.7G110400 Prunus persica HOM05D003756 ORTHO05D004304 1.0e-23 112.8 63 84.1
Sed0014276 Sechium edule HOM05D003756 ORTHO05D004304 1.0e-23 112.8 63 85.7
Sed0019143 Sechium edule HOM05D003756 ORTHO05D004304 1.0e-23 112.8 64 82.8
RcHm_v2.0_Chr3g0473621 Rosa chinensis HOM05D003756 ORTHO05D004304 1.7e-23 112.1 63 81.0
CDE06G0646 Ceratophyllum demersum HOM05D003756 ORTHO05D004304 2.2e-23 111.7 63 82.5
ClCG04G010050 Citrullus lanatus HOM05D003756 ORTHO05D004304 2.2e-23 111.7 63 85.7
Eucgr.K02043 Eucalyptus grandis HOM05D003756 ORTHO05D004304 2.2e-23 111.7 63 84.1
FAN02G3109 Fragaria x ananassa HOM05D003756 ORTHO05D004304 2.2e-23 111.7 63 81.0
FAN05G1127 Fragaria x ananassa HOM05D003756 ORTHO05D004304 2.2e-23 111.7 63 81.0
FAN05G3155 Fragaria x ananassa HOM05D003756 ORTHO05D004304 2.2e-23 111.7 63 81.0
FAN09G2235 Fragaria x ananassa HOM05D003756 ORTHO05D004304 2.2e-23 111.7 63 81.0
Gohir.A01G206400 Gossypium hirsutum HOM05D003756 ORTHO05D004304 2.2e-23 111.7 66 80.3
Gorai.002G240000 Gossypium raimondii HOM05D003756 ORTHO05D004304 2.2e-23 111.7 66 80.3
Thecc.05G088800 Theobroma cacao HOM05D003756 ORTHO05D004304 2.2e-23 111.7 66 80.3
TAR636G3345 Trochodendron aralioides HOM05D003756 ORTHO05D004304 2.2e-23 111.7 61 85.2
ECA248G1642 Erigeron canadensis HOM05D003756 ORTHO05D004304 2.9e-23 111.3 63 77.8
MD15G1359000 Malus domestica HOM05D003756 ORTHO05D004304 3.8e-23 110.9 63 82.5
Cpa.g.sc5.21 Carica papaya HOM05D003756 ORTHO05D004304 5.0e-23 110.5 66 80.3
FvH4_6g18660 Fragaria vesca HOM05D003756 ORTHO05D004304 5.0e-23 110.5 63 79.4
FAN14G1823 Fragaria x ananassa HOM05D003756 ORTHO05D004304 5.0e-23 110.5 63 79.4
Gohir.D01G195800 Gossypium hirsutum HOM05D003756 ORTHO05D004304 6.5e-23 110.2 66 78.8
HanXRQChr01g0024081 Helianthus annuus HOM05D003756 ORTHO05D004304 6.5e-23 110.2 63 77.8
ClCG04G010070 Citrullus lanatus HOM05D003756 ORTHO05D004304 8.5e-23 109.8 63 84.1
HanXRQChr02g0054771 Helianthus annuus HOM05D003756 ORTHO05D004304 8.5e-23 109.8 61 78.7
Actinidia24215 Actinidia chinensis HOM05D003756 ORTHO05D004304 1.1e-22 109.4 61 82.0
ECA233G1974 Erigeron canadensis HOM05D003756 ORTHO05D004304 1.1e-22 109.4 61 80.3
Aqoxy2G03946 Aquilegia oxysepala HOM05D003756 ORTHO05D004304 1.5e-22 109.0 63 81.0
CANSAT80G0977 Cannabis sativa HOM05D003756 ORTHO05D004304 1.5e-22 109.0 63 79.4
Duzib106G1642 Durio zibethinus HOM05D003756 ORTHO05D004304 1.5e-22 109.0 65 80.0
Atru.chr8.1542 Acer truncatum HOM05D003756 ORTHO05D004304 1.9e-22 108.6 66 78.8
Duzib128G1348 Durio zibethinus HOM05D003756 ORTHO05D004304 1.9e-22 108.6 65 80.0
FvH4_5g38790 Fragaria vesca HOM05D003756 ORTHO05D004304 1.9e-22 108.6 63 79.4
Gohir.A09G139300 Gossypium hirsutum HOM05D003756 ORTHO05D004304 1.9e-22 108.6 66 77.3
Gohir.D09G135300 Gossypium hirsutum HOM05D003756 ORTHO05D004304 1.9e-22 108.6 66 77.3
Gorai.006G155200 Gossypium raimondii HOM05D003756 ORTHO05D004304 1.9e-22 108.6 66 77.3
PGR142G3329 Punica granatum HOM05D003756 ORTHO05D004304 1.9e-22 108.6 63 82.5
Lsat_1_v5_gn_1_59380 Lactuca sativa HOM05D003756 ORTHO05D004304 2.5e-22 108.2 61 78.7
QL07p038800 Quercus lobata HOM05D003756 ORTHO05D004304 2.5e-22 108.2 62 74.2
QL07p039050 Quercus lobata HOM05D003756 ORTHO05D004304 2.5e-22 108.2 62 74.2
Sabra04G0129400 Salix brachista HOM05D003756 ORTHO05D004304 2.5e-22 108.2 64 78.1
BraA04t16378Z Brassica rapa HOM05D003756 ORTHO05D004304 3.2e-22 107.8 54 94.4
Gohir.D01G127900 Gossypium hirsutum HOM05D003756 ORTHO05D004304 3.2e-22 107.8 65 78.5
Gorai.002G158500 Gossypium raimondii HOM05D003756 ORTHO05D004304 3.2e-22 107.8 65 78.5
Lsat_1_v5_gn_6_38741 Lactuca sativa HOM05D003756 ORTHO05D004304 3.2e-22 107.8 61 78.7
CAN.G1358.12 Capsicum annuum HOM05D003756 ORTHO05D004304 4.2e-22 107.5 63 76.2
Cfa016605 Carpinus fangiana HOM05D003756 ORTHO05D004304 4.2e-22 107.5 63 77.8
Haze_19608 Corylus avellana HOM05D003756 ORTHO05D004304 4.2e-22 107.5 63 77.8
MD12G1036000 Malus domestica HOM05D003756 ORTHO05D004304 4.2e-22 107.5 63 81.0
MD14G1022700 Malus domestica HOM05D003756 ORTHO05D004304 4.2e-22 107.5 63 81.0
Atru.chr8.1539 Acer truncatum HOM05D003756 ORTHO05D004304 5.5e-22 107.1 66 77.3
Actinidia35464 Actinidia chinensis HOM05D003756 ORTHO05D004304 5.5e-22 107.1 61 78.7
CAN.G2235.1 Capsicum annuum HOM05D003756 ORTHO05D004304 5.5e-22 107.1 62 75.8
Dinv42555 Davidia involucrata HOM05D003756 ORTHO05D004304 5.5e-22 107.1 61 78.7
FAN04G2492 Fragaria x ananassa HOM05D003756 ORTHO05D004304 5.5e-22 107.1 63 77.8
Potri.009G149300 Populus trichocarpa HOM05D003756 ORTHO05D004304 5.5e-22 107.1 63 77.8
Solyc11g068400.2 Solanum lycopersicum HOM05D003756 ORTHO05D004304 5.5e-22 107.1 63 77.8
Sopen11g027120 Solanum pennellii HOM05D003756 ORTHO05D004304 5.5e-22 107.1 63 77.8
PGSC0003DMG400005923 Solanum tuberosum HOM05D003756 ORTHO05D004304 5.5e-22 107.1 61 77.0
CAN.G919.30 Capsicum annuum HOM05D003756 ORTHO05D004304 7.2e-22 106.7 61 78.7
Lalb_Chr20g0111721 Lupinus albus HOM05D003756 ORTHO05D004304 7.2e-22 106.7 63 74.6
Manes.08G025100 Manihot esculenta HOM05D003756 ORTHO05D004304 7.2e-22 106.7 66 75.8
Sc20g0006280 Simmondsia chinensis HOM05D003756 ORTHO05D004304 7.2e-22 106.7 66 77.3
Zm00001eb196190 Zea mays HOM05D003756 ORTHO05D004304 7.2e-22 106.7 63 74.6
Actinidia07248 Actinidia chinensis HOM05D003756 ORTHO05D004304 9.4e-22 106.3 61 78.7
Potri.004G188700 Populus trichocarpa HOM05D003756 ORTHO05D004304 9.4e-22 106.3 64 76.6
Glyma.03G195700 Glycine max HOM05D003756 ORTHO05D004304 1.2e-21 105.9 61 77.0
Gohir.A01G138200 Gossypium hirsutum HOM05D003756 ORTHO05D004304 1.2e-21 105.9 65 78.5
MBI17_g08353_MAGBIO Magnolia biondii HOM05D003756 ORTHO05D004304 1.2e-21 105.9 63 79.4
arahy.Tifrunner.gnm1.ann1.IH6TUL Arachis hypogaea HOM05D003756 ORTHO05D004304 1.6e-21 105.5 63 77.8
Lalb_Chr25g0288331 Lupinus albus HOM05D003756 ORTHO05D004304 2.1e-21 105.1 63 74.6
Phvul.001G190200 Phaseolus vulgaris HOM05D003756 ORTHO05D004304 2.1e-21 105.1 61 78.7
TWI53G0293 Tripterygium wilfordii HOM05D003756 ORTHO05D004304 3.6e-21 104.4 74 70.3
Glyma.13G153500 Glycine max HOM05D003756 ORTHO05D004304 4.7e-21 104.0 63 76.2
GSVIVG01033840001 Vitis vinifera HOM05D003756 ORTHO05D004304 4.7e-21 104.0 61 78.7
Zm00001eb093400 Zea mays HOM05D003756 ORTHO05D004304 6.1e-21 103.6 63 71.4
CSS0028702 Camellia sinensis var. sinensis HOM05D003756 ORTHO05D004304 8.0e-21 103.2 61 75.4
CiPaw.10G009500 Carya illinoinensis HOM05D003756 ORTHO05D004304 8.0e-21 103.2 63 76.2
FAN18G4123 Fragaria x ananassa HOM05D003756 ORTHO05D004304 8.0e-21 103.2 66 75.8
Os05g0400400 Oryza sativa ssp. japonica HOM05D003756 ORTHO05D004304 1.0e-20 102.8 61 72.1
HPP92_026089 Vanilla planifolia HOM05D003756 ORTHO05D004304 1.0e-20 102.8 62 74.2
AUR62006180 Chenopodium quinoa HOM05D003756 ORTHO05D004304 1.4e-20 102.4 61 78.7
AUR62028527 Chenopodium quinoa HOM05D003756 ORTHO05D004304 1.4e-20 102.4 61 78.7
Nn6g34903 Nelumbo nucifera HOM05D003756 ORTHO05D004304 1.4e-20 102.4 63 77.8
TAR623G0741 Trochodendron aralioides HOM05D003756 ORTHO05D004304 1.4e-20 102.4 63 77.8
CSS0017737 Camellia sinensis var. sinensis HOM05D003756 ORTHO05D004304 1.8e-20 102.1 61 73.8
CSS0036255 Camellia sinensis var. sinensis HOM05D003756 ORTHO05D004304 1.8e-20 102.1 61 73.8
CAN.G1039.16 Capsicum annuum HOM05D003756 ORTHO05D004304 1.8e-20 102.1 66 69.7
HPP92_025135 Vanilla planifolia HOM05D003756 ORTHO05D004304 1.8e-20 102.1 62 74.2
Ah.15g090880 Amaranthus hybridus HOM05D003756 ORTHO05D004304 4.0e-20 100.9 63 73.0
RcHm_v2.0_Chr7g0240771 Rosa chinensis HOM05D003756 ORTHO05D004304 4.0e-20 100.9 63 74.6
CiPaw.09G013700 Carya illinoinensis HOM05D003756 ORTHO05D004304 8.8e-20 99.8 63 74.6
Cc01_g09260 Coffea canephora HOM05D003756 ORTHO05D004304 1.2e-19 99.4 64 68.8
MD07G1149900 Malus domestica HOM05D003756 ORTHO05D004304 2.0e-19 98.6 60 76.7
Oeu002376.1 Olea europaea HOM05D003756 ORTHO05D004304 3.4e-19 97.8 61 70.5
PSO339G6416 Papaver somniferum HOM05D003756 ORTHO05D004304 4.4e-19 97.4 63 74.6
PSO384G4395 Papaver somniferum HOM05D003756 ORTHO05D004304 4.4e-19 97.4 63 74.6
HanXRQChr14g0451601 Helianthus annuus HOM05D003756 ORTHO05D004304 5.7e-19 97.1 61 72.1
SEGI_29748 Sequoiadendron giganteum HOM05D003756 ORTHO05D004304 9.7e-19 96.3 63 69.8
unitig_747.g21944 Utricularia gibba HOM05D003756 ORTHO05D004304 9.7e-19 96.3 63 68.3
Nitab4.5_0000132g0030 Nicotiana tabacum HOM05D003756 ORTHO05D004304 1.7e-18 95.5 74 66.2
Migut.D02449 Erythranthe guttata HOM05D003756 ORTHO05D004304 2.2e-18 95.1 63 69.8
SalBow5G5426 Salvia bowleyana HOM05D003756 ORTHO05D004304 2.2e-18 95.1 63 71.4
Nitab4.5_0001216g0110 Nicotiana tabacum HOM05D003756 ORTHO05D004304 3.7e-18 94.4 80 60.0
Sp4g18470 Schrenkiella parvula HOM05D003756 ORTHO05D004304 3.7e-18 94.4 49 89.8
ECA238G2045 Erigeron canadensis HOM05D003756 ORTHO05D004304 1.1e-17 92.8 61 68.9
arahy.Tifrunner.gnm1.ann1.N59HKK Arachis hypogaea HOM05D003756 ORTHO05D004304 1.4e-17 92.4 85 56.5
TAR633G1678 Trochodendron aralioides HOM05D003756 ORTHO05D004304 1.4e-17 92.4 94 53.2
CAN.G28765.1 Capsicum annuum HOM05D003756 ORTHO05D004304 3.1e-17 91.3 64 67.2
Ah.08g210600 Amaranthus hybridus HOM05D001616 ORTHO05D003701 2.0e-16 88.6 87 54.0
Rhsim13G0111400 Rhododendron simsii HOM05D003756 ORTHO05D004304 2.0e-16 88.6 89 51.7
MD16G1126500 Malus domestica HOM05D003756 ORTHO05D004304 2.7e-16 88.2 63 66.7
Glyma.19G194915 Glycine max HOM05D003756 ORTHO05D004304 4.5e-16 87.4 90 51.1
Mapoly0074s0034 Marchantia polymorpha HOM05D003756 ORTHO05D004304 1.0e-15 86.3 58 67.2
SEGI_32530 Sequoiadendron giganteum HOM05D003756 ORTHO05D004304 2.9e-15 84.7 46 84.8
Duzib093G1183 Durio zibethinus HOM05D003756 ORTHO05D004304 5.0e-15 84.0 48 79.2
COL.COLO4_29737 Corchorus olitorius HOM05D003756 ORTHO05D004304 8.5e-15 83.2 49 75.5
CsaV3_6G040700 Cucumis sativus L. HOM05D003756 ORTHO05D004304 8.5e-15 83.2 46 84.8
PSO478G0414 Papaver somniferum HOM05D003756 ORTHO05D004304 8.5e-15 83.2 61 62.3
ATR0796G241 Amborella trichopoda HOM05D003756 ORTHO05D004304 1.1e-14 82.8 46 80.4
Nitab4.5_0006996g0050 Nicotiana tabacum HOM05D003756 ORTHO05D004304 1.9e-14 82.0 46 78.3
Actinidia37081 Actinidia chinensis HOM05D003756 ORTHO05D004304 2.5e-14 81.6 46 78.3
Ciclev10013189m.g Citrus clementina HOM05D003756 ORTHO05D004304 2.5e-14 81.6 49 75.5
Dinv29482 Davidia involucrata HOM05D003756 ORTHO05D004304 3.2e-14 81.3 46 76.1
Oeu035551.2 Olea europaea HOM05D003756 ORTHO05D004304 7.2e-14 80.1 46 73.9
Rhsim01G0205100 Rhododendron simsii HOM05D003756 ORTHO05D004304 1.2e-13 79.3 114 40.4
Nitab4.5_0000963g0100 Nicotiana tabacum HOM05D003756 ORTHO05D004304 1.6e-13 79.0 47 74.5
Pp3c7_2560 Physcomitrium patens HOM05D003756 ORTHO05D004304 1.6e-13 79.0 56 60.7
PGSC0003DMG400026342 Solanum tuberosum HOM05D003756 ORTHO05D004304 1.6e-13 79.0 51 70.6
Hma1.2p1_0578F.1_g182500 Hydrangea macrophylla HOM05D003756 ORTHO05D004304 2.1e-13 78.6 46 71.7
Sabra09G0117900 Salix brachista HOM05D003756 ORTHO05D004304 2.1e-13 78.6 46 76.1
Hund19934 Selenicereus undatus HOM05D003756 ORTHO05D004304 2.7e-13 78.2 46 76.1
EL10Ac7g16918 Beta vulgaris HOM05D003756 ORTHO05D004304 3.6e-13 77.8 47 72.3
TPR.G19525 Trifolium pratense HOM05D003756 ORTHO05D004304 6.1e-13 77.0 46 71.7
Pp3c11_23610 Physcomitrium patens HOM05D003756 ORTHO05D004304 1.0e-12 76.3 60 56.7
Sc02g0000240 Simmondsia chinensis HOM05D003756 ORTHO05D004304 2.3e-12 75.1 46 71.7
CBR_g21065 Chara braunii HOM05D003756 ORTHO05D004304 4.0e-12 74.3 56 62.5
Hma1.2p1_0084F.1_g043780 Hydrangea macrophylla HOM05D003756 ORTHO05D004304 8.8e-12 73.2 49 61.2
MELO3C032936.2 Cucumis melo HOM05D003756 ORTHO05D004304 1.5e-11 72.4 40 82.5
SalBow6G3312 Salvia bowleyana HOM05D003756 ORTHO05D004304 1.3e-10 69.3 46 65.2
Dinv33579 Davidia involucrata HOM05D003756 ORTHO05D004304 2.2e-10 68.6 38 76.3
FAN13G0109 Fragaria x ananassa HOM05D003756 ORTHO05D004304 2.8e-10 68.2 47 63.8
FAN13G3094 Fragaria x ananassa HOM05D003756 ORTHO05D004304 4.8e-10 67.4 46 69.6
Aa31LG10G7740 Aethionema arabicum HOM05D003756 ORTHO05D004304 1.8e-09 65.5 33 90.9
MCO16G664 Micromonas commoda HOM05D003756 ORTHO05D004304 3.5e-08 61.2 59 52.5
Nn2g14157 Nelumbo nucifera HOM05D003756 ORTHO05D004304 2.3e-07 58.5 37 73.0
FAN04G1204 Fragaria x ananassa HOM05D003756 ORTHO05D004304 8.6e-07 56.6 47 55.3
FAN04G2029 Fragaria x ananassa HOM05D003756 ORTHO05D004304 8.6e-07 56.6 47 55.3
PRCOL_00006894 Prasinoderma coloniale HOM05D003756 ORTHO05D004304 1.5e-06 55.8 58 44.8
FAN21G3678 Fragaria x ananassa HOM05D002333 ORTHO05D004304 5.5e-06 53.9 34 70.6
Cre11.g468950 Chlamydomonas reinhardtii HOM05D003756 ORTHO05D004304 7.2e-06 53.5 49 38.8


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